ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39b11 |
|---|---|
| Clone Library Name | barley_pub |
>STB5L_MOUSE (Q5DQR4) Syntaxin-binding protein 5-like (Tomosyn-2) (Lethal(2)| giant larvae protein homolog 4) Length = 1185 Score = 38.5 bits (88), Expect = 0.008 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 9/58 (15%) Frame = +3 Query: 309 HSGGIGGLRAEDVSPRLAFHY---------GVPADAALLAYEPLLHVLAVGTRNGQIK 455 H GG GL E++ L Y G P LA++P+ +LA+GTR G I+ Sbjct: 37 HPGGTAGLPREEIQESLTSDYFQICKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIR 94
>STB5L_HUMAN (Q9Y2K9) Syntaxin-binding protein 5-like (Tomosyn-2) (Lethal(2)| giant larvae protein homolog 4) Length = 1186 Score = 35.4 bits (80), Expect = 0.069 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 9/58 (15%) Frame = +3 Query: 309 HSGGIGGLRAEDVSPRLAFHY---------GVPADAALLAYEPLLHVLAVGTRNGQIK 455 H G G+ E++ L Y G P LA++P+ +LA+GTR G I+ Sbjct: 38 HPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQPTALAFDPVQKILAIGTRTGAIR 95
>L2GL1_MOUSE (Q80Y17) Lethal(2) giant larvae protein homolog 1 (LLGL) (Mlgl)| (Mgl-1) Length = 1036 Score = 34.3 bits (77), Expect = 0.15 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%) Frame = +3 Query: 360 AFH----YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 AFH +G P + LA++P L ++A+GTR+G +K Sbjct: 24 AFHKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVK 59
>L2GL1_BOVIN (Q8MKF0) Lethal(2) giant larvae protein homolog 1 (LLGL) (Bgl-1)| (Giant larvae-1) Length = 1036 Score = 34.3 bits (77), Expect = 0.15 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%) Frame = +3 Query: 360 AFH----YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 AFH +G P + LA++P L ++A+GTR+G +K Sbjct: 24 AFHKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVK 59
>L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL)| Length = 1020 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + L Y P L +LA+GTR+G IK Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIK 57
>L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2| Length = 1019 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + L Y P L +LA+GTR+G IK Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAIK 57
>L2GL2_MOUSE (Q3TJ91) Lethal(2) giant larvae protein homolog 2 (Lethal giant| larvae-like protein 2) Length = 1027 Score = 33.5 bits (75), Expect = 0.26 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + L Y P L +LA+GTR+G +K Sbjct: 29 HGFPHQPSALGYSPSLRILAIGTRSGAVK 57
>L2GL1_HUMAN (Q15334) Lethal(2) giant larvae protein homolog 1 (LLGL) (Human| homolog to the D-lgl gene) (Hugl-1) (DLG4) Length = 1062 Score = 33.1 bits (74), Expect = 0.34 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + LA++P L ++A+GTR+G +K Sbjct: 31 HGFPNQPSALAFDPELRIMAIGTRSGAVK 59
>L2GL1_RAT (Q8K4K5) Lethal(2) giant larvae protein homolog 1 (LLGL) (Rgl-1)| Length = 1036 Score = 33.1 bits (74), Expect = 0.34 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + LA++P L ++A+GTR+G +K Sbjct: 31 HGFPNQPSALAFDPELRIMAIGTRSGAVK 59
>L2GL_DROME (P08111) Lethal(2) giant larvae protein| Length = 1161 Score = 32.7 bits (73), Expect = 0.45 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 354 RLAFHYGVPADAALLAYEPLLHVLAVGTRNGQIK 455 R +G P + LAY+P+L ++A+GT+ G +K Sbjct: 27 RKTAQHGFPHKPSALAYDPVLKLMAIGTQTGALK 60
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 32.7 bits (73), Expect = 0.45 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 328 PPMPPLCCFLEAFSTSFLTNMADPRRPKAEDEPGSIGR-CSR 206 PP P C + + T L+ + DP + +PG IGR C R Sbjct: 1140 PPSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDR 1181
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 328 PPMPPLCCFLEAFSTSFLTNMADPRRPKAEDEPGSIGR-CSR 206 PP P C + + T L+ + DP + +PG IGR C R Sbjct: 1915 PPGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDR 1956
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 328 PPMPPLCCFLEAFSTSFLTNMADPRRPKAEDEPGSIGR-CSR 206 PP P C + + T L+ + DP + +PG IGR C R Sbjct: 1916 PPGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDR 1957
>L2GL2_BRARE (Q7SZE3) Lethal(2) giant larvae protein homolog 2 (Protein penner)| Length = 1020 Score = 31.6 bits (70), Expect = 0.99 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + L + P L +LA+GTR+G IK Sbjct: 29 HGFPHQPSALGFSPSLELLAIGTRSGAIK 57
>STXB5_HUMAN (Q5T5C0) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant| larvae protein homolog 3) Length = 1151 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + LA++P+ +LAVGT+ G ++ Sbjct: 54 HGFPYQPSALAFDPVQKILAVGTQTGALR 82
>STB5L_BRARE (Q5SQE2) Syntaxin-binding protein 5-like| Length = 1159 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P LA++P+ +LA+G+R+G I+ Sbjct: 60 HGFPYQPTALAFDPVQKILAIGSRSGGIR 88
>STXB5_RAT (Q9WU70) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant| larvae protein homolog 3) Length = 1152 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + LA++P+ +LAVGT+ G ++ Sbjct: 55 HGFPYQPSALAFDPVQKILAVGTQTGALR 83
>STXB5_MOUSE (Q8K400) Syntaxin-binding protein 5 (Tomosyn-1) (Lethal(2) giant| larvae protein homolog 3) Length = 1152 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 Query: 369 YGVPADAALLAYEPLLHVLAVGTRNGQIK 455 +G P + LA++P+ +LAVGT+ G ++ Sbjct: 55 HGFPYQPSALAFDPVQKILAVGTQTGALR 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,047,654 Number of Sequences: 219361 Number of extensions: 553767 Number of successful extensions: 1762 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1734 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1762 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
