Clone Name | bastl39b05 |
---|---|
Clone Library Name | barley_pub |
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 125 bits (315), Expect = 4e-29 Identities = 57/85 (67%), Positives = 66/85 (77%) Frame = +1 Query: 217 MAANRGMVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVAC 396 M A+ G+VAGS+ RNE V IR++ D K +K GQ CQICGD VG++ TGDVFVAC Sbjct: 1 MEASAGLVAGSYRRNELVRIRHESDGGT--KPLKNMNGQICQICGDDVGLAETGDVFVAC 58 Query: 397 NECAFPVCRPCYEYERKDGVKCCPQ 471 NECAFPVCRPCYEYERKDG +CCPQ Sbjct: 59 NECAFPVCRPCYEYERKDGTQCCPQ 83
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 112 bits (280), Expect = 5e-25 Identities = 49/85 (57%), Positives = 62/85 (72%) Frame = +1 Query: 217 MAANRGMVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVAC 396 M A+ G+VAGSHNRNE V+I N + K +K GQ C+ICGD +G++ GD+FVAC Sbjct: 1 MEASAGLVAGSHNRNELVVIHNHEEP----KPLKNLDGQFCEICGDQIGLTVEGDLFVAC 56 Query: 397 NECAFPVCRPCYEYERKDGVKCCPQ 471 NEC FP CRPCYEYER++G + CPQ Sbjct: 57 NECGFPACRPCYEYERREGTQNCPQ 81
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 108 bits (269), Expect = 9e-24 Identities = 50/79 (63%), Positives = 59/79 (74%) Frame = +1 Query: 235 MVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFP 414 MVAGS+ R EFV R+D D K +K GQ CQICGD VG++ TG+VFVACNEC FP Sbjct: 1 MVAGSYRRYEFVRNRDDSDDGL--KPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFP 58 Query: 415 VCRPCYEYERKDGVKCCPQ 471 +C+ CYEYERKDG +CCPQ Sbjct: 59 LCQSCYEYERKDGSQCCPQ 77
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 107 bits (268), Expect = 1e-23 Identities = 48/79 (60%), Positives = 59/79 (74%) Frame = +1 Query: 235 MVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFP 414 ++AGSHNRNEFV+I D A + V+ GQ CQICGD + +S G+ FVACNECAFP Sbjct: 7 LIAGSHNRNEFVLINADESARI--RSVEELSGQTCQICGDEIELSVDGESFVACNECAFP 64 Query: 415 VCRPCYEYERKDGVKCCPQ 471 VCRPCYEYER++G + CPQ Sbjct: 65 VCRPCYEYERREGNQSCPQ 83
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 106 bits (265), Expect = 3e-23 Identities = 46/79 (58%), Positives = 60/79 (75%) Frame = +1 Query: 235 MVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFP 414 ++AGSHNRNEFV+I D A + V+ GQ CQICGD + ++ + ++FVACNECAFP Sbjct: 7 LIAGSHNRNEFVLINADESARI--RSVQELSGQTCQICGDEIELTVSSELFVACNECAFP 64 Query: 415 VCRPCYEYERKDGVKCCPQ 471 VCRPCYEYER++G + CPQ Sbjct: 65 VCRPCYEYERREGNQACPQ 83
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 104 bits (259), Expect = 1e-22 Identities = 46/79 (58%), Positives = 59/79 (74%) Frame = +1 Query: 235 MVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFP 414 ++AGSHNRNEFV+I D +A + V+ GQ CQIC D + ++ G+ FVACNECAFP Sbjct: 7 LIAGSHNRNEFVLINADENARI--RSVQELSGQTCQICRDEIELTVDGEPFVACNECAFP 64 Query: 415 VCRPCYEYERKDGVKCCPQ 471 VCRPCYEYER++G + CPQ Sbjct: 65 VCRPCYEYERREGNQACPQ 83
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 98.6 bits (244), Expect = 7e-21 Identities = 42/79 (53%), Positives = 56/79 (70%) Frame = +1 Query: 235 MVAGSHNRNEFVMIRNDGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFP 414 ++AGSHNRNEFV+I D A + + GQ C+IC D + ++ G+ F+ACNECAFP Sbjct: 7 LIAGSHNRNEFVLINADDTARI--RSAEELSGQTCKICRDEIELTDNGEPFIACNECAFP 64 Query: 415 VCRPCYEYERKDGVKCCPQ 471 CRPCYEYER++G + CPQ Sbjct: 65 TCRPCYEYERREGNQACPQ 83
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 84.3 bits (207), Expect = 1e-16 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = +1 Query: 283 DGDAPAPGKEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKDGVKC 462 + + GK +K Q CQIC D VG + GD FVAC+ C+FPVCRPCYEYERKDG + Sbjct: 2 ESEGETAGKPMKNIVPQTCQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQS 61 Query: 463 CPQ 471 CPQ Sbjct: 62 CPQ 64
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 72.4 bits (176), Expect = 5e-13 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +1 Query: 337 CQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKDGVKCCPQ 471 C++CGD V G FVAC+ C +PVC+PCYEYER +G KCCPQ Sbjct: 23 CKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQ 67
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 63.2 bits (152), Expect = 3e-10 Identities = 22/43 (51%), Positives = 32/43 (74%) Frame = +1 Query: 337 CQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKDGVKCC 465 C CG+ +GV + G+ FVAC+EC+FP+C+ C EYE K+G + C Sbjct: 9 CNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRIC 51
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 32.7 bits (73), Expect = 0.48 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPC 429 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 84 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 122 Score = 30.0 bits (66), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -3 Query: 410 KAHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASP 285 +A+S+QA++ +P + P QP PP + PG G P Sbjct: 271 RANSVQASRPAPASMPSPAPPQPVQPGPPGGSRAAPGPGRFP 312
>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)| Length = 704 Score = 32.7 bits (73), Expect = 0.48 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPC 429 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 88 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 126
>RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)| Length = 681 Score = 32.7 bits (73), Expect = 0.48 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPC 429 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 84 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 122 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -3 Query: 410 KAHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASP 285 +A+S+QA + +P P QP PP + PG G P Sbjct: 268 RANSVQAARPAPAPVPSPAPPQPVQPGPPGGSRATPGPGRFP 309
>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)| Length = 694 Score = 32.7 bits (73), Expect = 0.48 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPC 429 K V G G C +CG+ +G+ G V C +C VC C Sbjct: 88 KNVAGDGVNRCILCGEQLGM--LGSACVVCEDCKKNVCTKC 126
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/67 (29%), Positives = 25/67 (37%) Frame = -3 Query: 389 TKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRIMTNSLRLCDPATIPRLAAIFR 210 T SP T T P P PP T+ P +PS I T + L P ++ Sbjct: 1404 TTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTT 1463 Query: 209 SPAALTP 189 P TP Sbjct: 1464 PPPTTTP 1470
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/59 (32%), Positives = 24/59 (40%) Frame = -3 Query: 362 PTVSPHIWQP*PPAPFTSLPGAGASPSLRIMTNSLRLCDPATIPRLAAIFRSPAALTPH 186 P+ +P I P PP PFT PG P T P T+P + P+ PH Sbjct: 849 PSQAPGILTPPPPYPFTPQPGVLGQPPPTRHTQLYPGPPPDTLPPHSGALPFPSPGPPH 907
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 27.7 bits (60), Expect(2) = 3.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 252 VRPRDHPPVGRHLSLPRRPHTPPAAVTKA 166 +RP+ PP G LP PH PP++ + A Sbjct: 811 LRPQSQPPEG---PLPPAPHLPPSSTSSA 836 Score = 20.8 bits (42), Expect(2) = 3.0 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = -3 Query: 353 SPHIWQP*PPAPFTSLPGAGASPSLRIMTNSLRLCDPATIP 231 SPH+ P P P + P S S L C P P Sbjct: 737 SPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP 777
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -3 Query: 455 TPSLRSYS*QGRQTGKAHSLQATKTSP-VAETPTVSPHIWQP*PPAPFTSLPGAGASPS 282 +P++ + S T + A P V T ++ P ++QP P + ++ PGA SP+ Sbjct: 369 SPAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPT 427
>SET4_YEAST (P42948) SET domain protein 4| Length = 560 Score = 29.3 bits (64), Expect = 5.3 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 334 GCQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKDGVK 459 GC ICG + + ++F+ CN+C + CY +++ D +K Sbjct: 162 GC-ICGSS---DSKDELFIQCNKCKTWQHKLCYAFKKSDPIK 199
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -3 Query: 407 AHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRI-MTNSLRLCDPATIP 231 AH +QA ++ TPT +P IW P AP L A A+ S+ I +T+ RL Sbjct: 756 AHRVQAAASA----TPTPTPVIWTPLIQAP---LQAAAATTSVAIALTHHPRL------- 801 Query: 230 RLAAIFRSP 204 AAIFR P Sbjct: 802 -PAAIFRPP 809
>MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 856 Score = 29.3 bits (64), Expect = 5.3 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +1 Query: 394 CNECAFPVCRPCYEYERKDGVKCC 465 C EC F VC+ C Y++ + + C Sbjct: 81 CGECKFSVCKSCCSYQKHEKLWVC 104
>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Brain cyclic nucleotide gated channel 3) (BCNG-3) Length = 1186 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -3 Query: 407 AHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRI-MTNSLRLCDPATIP 231 AH +QA ++ TPT +P IW P AP L A A+ S+ I +T+ RL Sbjct: 741 AHRVQAAASA----TPTPTPVIWTPLIQAP---LQAAAATTSVAIALTHHPRL------- 786 Query: 230 RLAAIFRSP 204 AAIFR P Sbjct: 787 -PAAIFRPP 794
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 13/78 (16%) Frame = -3 Query: 419 QTGKAHSLQATKTSPVAETPTVSPHIWQ------------P*PPAPFTSLPGAGASPS-L 279 Q A SL + SP P+ P + P PPA +PGAG +P + Sbjct: 1045 QGTSASSLSSVTQSPGHPGPSAGPALANSTGSKPNVETEPPAPPAALLKVPGAGTAPKPV 1104 Query: 278 RIMTNSLRLCDPATIPRL 225 + L P PRL Sbjct: 1105 SVACTQLAFSGPKLAPRL 1122
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 29.3 bits (64), Expect = 5.3 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -3 Query: 416 TGKAHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLP-GAGASPSLRIMTNS 261 T ++ SL AT T + P P + PAPFTS P G GAS + I + S Sbjct: 312 TFQSPSLSAT-TQTIRIGPPPPPSVTNAPTPAPFTSTPSGGGASQTKSIYSKS 363
>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1198 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -3 Query: 407 AHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRI-MTNSLRLCDPATIP 231 AH +QA ++ TPT +P IW P AP L A A+ S+ I +T+ RL Sbjct: 756 AHRVQAAASA----TPTPTPVIWTPLIQAP---LQAAAATTSVAIALTHHPRL------- 801 Query: 230 RLAAIFRSP 204 AAIFR P Sbjct: 802 -PAAIFRPP 809
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 28.9 bits (63), Expect = 6.9 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 374 VAETPTVSPHIWQP*PPAPFTSLPGAGASPS 282 V T ++ P ++QP P + ++ PGA SP+ Sbjct: 393 VVTTASIRPSVYQPVPASSYSPSPGANYSPT 423
>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1323 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKD 450 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 653 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRMKRKN 694
>ACCN3_HUMAN (Q9UHC3) Amiloride-sensitive cation channel 3 (Acid-sensing ion| channel 3) (ASIC3) (hASIC3) (Testis sodium channel 1) (hTNaC1) Length = 531 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -2 Query: 219 HLSLPRRPHTPPAAVTK 169 HLSL RP TPP AVTK Sbjct: 500 HLSLGPRPPTPPCAVTK 516
>JHD2A_RAT (Q63679) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) (Testis-specific gene A protein) (Zinc-finger protein TSGA) Length = 1214 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKD 450 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 537 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRLKRKN 578
>JHD2A_HUMAN (Q9Y4C1) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1321 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 307 KEVKGAGGQGCQICGDTVGVSATGDVFVACNECAFPVCRPCYEYERKD 450 + VKG + C +C T+ ++ C C F VC CY +RK+ Sbjct: 653 RAVKGVR-EMCDVCDTTIF-----NLHWVCPRCGFGVCVDCYRMKRKN 694
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -3 Query: 389 TKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPS 282 T+T +++ PT SP P PP+P T G SPS Sbjct: 691 TETESISKNPTKSP----PPPPSPSTMDTGTSNSPS 722
>OXR1_ASPFU (Q4WX99) Oxidation resistance protein 1| Length = 324 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = -3 Query: 422 RQTGKAHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRIMTNSL----R 255 R+ ++ ++ TSP P + +QP P P T PG G P +++T +L R Sbjct: 77 RKMNARNNRDSSTTSPDIFVPIRTASPFQPPPLTPLTLTPGPGV-PQQQLLTRALAEEIR 135 Query: 254 LCDPATI 234 L PA + Sbjct: 136 LLVPARL 142
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 28.5 bits (62), Expect = 9.1 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 404 HSLQATKTSPVAETPTVSPHIWQP*PP---APF-TSLPGAGASPSLRIMTNSLRLCDPAT 237 H + + K P A T T PH P PP AP LP A SPS ++S +P Sbjct: 247 HRIISPKVEPRALTLTSIPHPHPPEPPPLIAPLPPELPKAHTSPSSSSSSSSSGFAEPLE 306 Query: 236 I 234 I Sbjct: 307 I 307
>TUS1_YEAST (Q06412) Rho1 guanine nucleotide exchange factor TUS1 (TOR unique| function suppressor protein 1) Length = 1307 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = -3 Query: 404 HSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRIMTNSLRLCDPATIPRL 225 HS + TS TP + ++ + PP P P L T S+R+ P P Sbjct: 80 HSARGNGTSSSESTPKSTKYVKERRPPPP----------PPLLYSTESIRIDSPMVSPSS 129 Query: 224 AAIFRSPAALT 192 + RSP L+ Sbjct: 130 QSRERSPNKLS 140
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)| (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.5 bits (62), Expect = 9.1 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -2 Query: 252 VRPRDHPPVGRHLSLPRRPHTP 187 + P+ PP G+H++ PR P P Sbjct: 2282 IAPQSRPPEGKHITTPREPLPP 2303
>AL_DROME (Q06453) Homeobox protein aristaless| Length = 408 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/53 (37%), Positives = 26/53 (49%) Frame = -3 Query: 416 TGKAHSLQATKTSPVAETPTVSPHIWQP*PPAPFTSLPGAGASPSLRIMTNSL 258 T +A SL T+TSPVA T + SP P P P A+P T+S+ Sbjct: 328 TQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPRAATPPEDRRTSSI 380 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,838,733 Number of Sequences: 219361 Number of extensions: 953801 Number of successful extensions: 3720 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3469 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3700 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)