ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 400 bits (202), Expect = e-108 Identities = 244/258 (94%) Strand = Plus / Plus Query: 215 agatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatga 274 |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 202 agatggcggccaaccgggggatggtcgccgggtcgcacaaccgcaacgagttcgtcatga 261 Query: 275 tccgcaacgacggcgacgcgcccgccccgggtaaggaggtaaaaggcgcgggtggtcagg 334 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 262 tccgcaacgacggcgacgcgcccgccccgggtaaggaggtgaaaggcgcgggtggtcagg 321 Query: 335 gctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgttgcct 394 |||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||| Sbjct: 322 cctgccagatatgtggtgataccgttggcgtttcggccactggtgatgtctttgtcgcct 381 Query: 395 gcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgggg 454 |||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 382 gcaacgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggatgggg 441 Query: 455 tcaaatgctgtcctcagt 472 || ||||||||||||||| Sbjct: 442 tccaatgctgtcctcagt 459
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 180 bits (91), Expect = 3e-42 Identities = 112/119 (94%) Strand = Plus / Plus Query: 331 cagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgtt 390 |||| ||||||||||||||| |||||||||||||| || |||||||| |||||||||||| Sbjct: 131 caggtctgccagatatgtggcgacactgttggcgtctcagccaccggcgatgtctttgtt 190 Query: 391 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaagga 449 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 191 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcgcaagga 249 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 215 agatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatga 274 |||||||||| ||| ||||||||| ||||| || | ||| ||||| ||||||||||||| Sbjct: 15 agatggcggcgaacgcggggatggtggcgggctcacgcaaccgcaacgagttcgtcatga 74 Query: 275 tccgcaacgacggcgacgcgcccgccccgggtaag 309 ||||| |||||||||||||||||||||||| |||| Sbjct: 75 tccgccacgacggcgacgcgcccgccccggctaag 109
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Minus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 133058 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 132999 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 132998 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 132939 Query: 447 gga 449 ||| Sbjct: 132938 gga 132936 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 133738 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 133679 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 133678 ccgccccgacggcgacgcgcc 133658
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Minus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 21901 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 21842 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 21841 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 21782 Query: 447 gga 449 ||| Sbjct: 21781 gga 21779 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 22581 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 22522 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 22521 ccgccccgacggcgacgcgcc 22501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Minus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 4511434 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 4511375 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 4511374 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 4511315 Query: 447 gga 449 ||| Sbjct: 4511314 gga 4511312 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 4512114 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 4512055 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 4512054 ccgccccgacggcgacgcgcc 4512034 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 22 agtggaggaggaggagcagcagcagcggc 50 |||||||| |||||||||||||| ||||| Sbjct: 28098303 agtggagggggaggagcagcagccgcggc 28098331 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 gaggagtggaggaggaggag 37 |||||||||||||||||||| Sbjct: 25104166 gaggagtggaggaggaggag 25104147 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ggaggagcagcagcagcggcggca 54 |||||||||||||||||| ||||| Sbjct: 18599099 ggaggagcagcagcagcgacggca 18599122
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 246 ccgccccgacggcgacgcgcc 266
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 246 ccgccccgacggcgacgcgcc 266
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 246 ccgccccgacggcgacgcgcc 266
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 246 ccgccccgacggcgacgcgcc 266
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 ||| ||||||||||||||| Sbjct: 246 tcgccccgacggcgacgcgcc 266
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 297 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 356 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 357 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 416 Query: 447 gga 449 ||| Sbjct: 417 gga 419 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 186 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 245 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 246 ccgccccgacggcgacgcgcc 266
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full insert sequence Length = 1444 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 300 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 359 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 360 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 419 Query: 447 gga 449 ||| Sbjct: 420 gga 422 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 189 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 248 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 249 ccgccccgacggcgacgcgcc 269
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic subunit mRNA, partial cds Length = 1838 Score = 172 bits (87), Expect = 7e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 327 tggtcagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctt 386 |||||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 200 tggtcaggtctgccagatttgtggcgacactgttggcgtctcggccaccggcgacgtctt 259 Query: 387 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaa 446 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 260 tgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaa 319 Query: 447 gga 449 ||| Sbjct: 320 gga 322 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||||||||| ||||| || | ||| || || |||||||||||||| Sbjct: 89 gatggcggcgaacgcggggatggtggcgggatcccgcaaccggaacgagttcgtcatgat 148 Query: 276 ccgcaacgacggcgacgcgcc 296 |||| ||||||||||||||| Sbjct: 149 ccgccccgacggcgacgcgcc 169
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 331 cagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgtt 390 |||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct: 293 caggtctgccagatttgtggcgacactgttggcgtttcagccactggtgatgtctttgtt 352 Query: 391 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggat 450 |||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 353 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcgcaaggaa 412 Query: 451 ggggtcaaatgctgtcctcagt 472 ||| | ||||||| ||||||| Sbjct: 413 gggaaccaatgctgccctcagt 434 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 215 agatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatga 274 |||||||||||||| ||||||||| || || || ||||| ||||| ||||||||||||| Sbjct: 177 agatggcggccaacaaggggatggtggcaggctctcacaaccgcaacgagttcgtcatga 236 Query: 275 tccgcaacgacggcgacgcgcccgccccgggtaag 309 ||||| |||||||||||||||| | ||||| |||| Sbjct: 237 tccgccacgacggcgacgcgcctgtcccggctaag 271
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Plus Query: 331 cagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgtt 390 |||| ||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 288 caggtctgccagatatgtggcgacactgttggcgtctcggctactggcgatgtctttgtt 347 Query: 391 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaagga 449 || |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 348 gcttgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcgcaagga 406 Score = 107 bits (54), Expect = 3e-20 Identities = 84/94 (89%) Strand = Plus / Plus Query: 216 gatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatgat 275 ||||||||| ||| ||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 173 gatggcggcgaacgcgggtatggtggcgggctcgcacaaccgcaacgagttcgtcatgat 232 Query: 276 ccgcaacgacggcgacgcgcccgccccgggtaag 309 |||| |||||||||||||||||||||||| |||| Sbjct: 233 ccgccacgacggcgacgcgcccgccccggctaag 266
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 331 cagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgtt 390 |||| ||||||||| || || ||| |||| |||||||| ||||| ||||||||||||||| Sbjct: 303 caggtctgccagatttgcggcgactctgtgggcgtttcagccactggtgatgtctttgtt 362 Query: 391 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggat 450 |||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 363 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcgcaaggag 422 Query: 451 ggggtcaaatgctgtcctcagt 472 ||| | ||||||| ||||||| Sbjct: 423 gggaaccaatgctgccctcagt 444 Score = 109 bits (55), Expect = 8e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 215 agatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatga 274 |||||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 187 agatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcatga 246 Query: 275 tccgcaacgacggcgacgcgcccgccccgggtaag 309 ||||| |||||||||||||||| | ||||| |||| Sbjct: 247 tccgccacgacggcgacgcgccgggcccggctaag 281
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 331 cagggctgccagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgtt 390 |||| ||||||||| || |||||| |||| || ||||| ||||| ||||||||||||||| Sbjct: 297 caggtctgccagatttgcggtgactctgtgggtgtttcagccactggtgatgtctttgtt 356 Query: 391 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaacgcaagga 449 |||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 357 gcctgcaatgagtgtgccttccctgtctgccgcccatgctatgagtatgagcgcaagga 415 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 215 agatggcggccaaccgggggatggtcgcggggtcgcacaatcgcaatgagttcgtcatga 274 |||||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||||| Sbjct: 181 agatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcatga 240 Query: 275 tccgcaacgacggcga 290 ||||| |||||||||| Sbjct: 241 tccgccacgacggcga 256
>gb|DQ020216.1| Bambusa oldhamii cellulose synthase BoCesA3b mRNA, complete cds Length = 3707 Score = 111 bits (56), Expect = 2e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 346 tgtggtgacactgttggcgtttcggccaccggtgatgtctttgttgcctgcaatgagtgc 405 ||||| ||||||||||| |||| ||||| || ||||||||||| |||||||||||||| Sbjct: 206 tgtggcgacactgttgggctttcagccactggcgatgtctttgtcgcctgcaatgagtgt 265 Query: 406 gccttcccggtctgccgcccttgctatgagtatgaacgcaaggatggg 453 |||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 266 gccttcccagtttgtcggccttgctatgagtatgagcgcaaggatggg 313
>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds Length = 3571 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 346 tgtggtgacactgttggcgtttcggccaccggtgatgtctttgttgcctgcaatgagtgc 405 ||||| ||||||||||| | || ||||| || ||||||||||| |||||||||||||| Sbjct: 197 tgtggcgacactgttgggctctcagccactggcgatgtctttgtcgcctgcaatgagtgt 256 Query: 406 gccttcccggtctgccgcccttgctatgagtatgaacgcaaggatggg 453 |||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 257 gccttcccagtttgtcggccttgctatgagtatgagcgcaaggatggg 304
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 382 gtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaa 441 |||||||| |||||||| ||||| |||||||| || || || |||||||| |||||||| Sbjct: 260 gtctttgtcgcctgcaacgagtgtgccttcccagtttgtcggccttgctacgagtatgag 319 Query: 442 cgcaaggatggg 453 |||||||||||| Sbjct: 320 cgcaaggatggg 331
>gb|DQ014509.1| Eucalyptus grandis cellulose synthase 5 (CesA5) mRNA, complete cds Length = 3712 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 340 cagatatgtggtgacactgttggcgtttcggccaccggtgatgtctttgttgcctgcaat 399 ||||||||||| || || ||||| || |||||| ||| ||||| |||||||| |||||| Sbjct: 227 cagatatgtggcgataccgttggacttacggccagcggcgatgtttttgttgcttgcaat 286 Query: 400 gagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||| || ||||| || ||||| || || |||||||| Sbjct: 287 gagtgtgcattccctgtgtgccgtccctgttatgagta 324
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 409 ttcccggtctgccgcccttgctatgagtatgaacgcaaggatggg 453 |||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 317 ttcccggtgtgccgcccctgctacgagtatgaacggaaggatggg 361
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 409 ttcccggtctgccgcccttgctatgagtatgaacgcaaggatggg 453 |||||||| |||||||| ||||| ||||||||||| ||||||||| Sbjct: 344 ttcccggtgtgccgcccctgctacgagtatgaacggaaggatggg 388
>gb|AC152976.1| Mus musculus BAC RP23-103K17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194151 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 22 agtggaggaggaggagcagcagcagc 47 |||||||||||||||||||||||||| Sbjct: 115048 agtggaggaggaggagcagcagcagc 115073
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 557 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 606
>gb|AC115767.14| Mus musculus chromosome 6, clone RP23-83K15, complete sequence Length = 257790 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 agtggaggaggaggagcagcagcagc 47 |||||||||||||||||||||||||| Sbjct: 211009 agtggaggaggaggagcagcagcagc 210984
>gb|AY643519.1| Acacia mangium CesA1 mRNA, complete cds Length = 3793 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 376 ggtgatgtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgag 435 |||||||| |||||||| ||||||||||| || ||||| || || || ||||| ||||| Sbjct: 346 ggtgatgtttttgttgcttgcaatgagtgtgcattcccagtttgtcgtccttgttatgaa 405 Query: 436 tatgaacgcaaggatggg 453 ||||| || || |||||| Sbjct: 406 tatgagcgaaaagatggg 423
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 384 ctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||||||| ||||||||||| || ||||| || ||||| |||||||| ||||| Sbjct: 98178 ctttgttgcttgcaatgagtgtgctttccctgtttgccggccttgctacgagta 98125
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 5890086 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 5890037 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 23754204 gaggaggaggagcagcagcagcgg 23754227 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcag 46 |||||||||||||||||||||| Sbjct: 29411741 ggaggaggaggagcagcagcag 29411720 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcag 46 |||||||||||||||||||||| Sbjct: 25834346 ggaggaggaggagcagcagcag 25834367 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 394 tgcaatgagtgcgccttcccggtctgccgc 423 ||||| ||||||||||||||||| |||||| Sbjct: 13693023 tgcaacgagtgcgccttcccggtgtgccgc 13692994 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 394 tgcaatgagtgcgccttcccggtctgccgc 423 ||||| |||||||||||||| ||||||||| Sbjct: 8528688 tgcaacgagtgcgccttccccgtctgccgc 8528717 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 27 aggaggaggagcagcagcagcggcggca 54 ||||||| |||||||||||||| ||||| Sbjct: 25416026 aggaggacgagcagcagcagcgccggca 25415999 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ggaggaggagcagcagcagc 47 |||||||||||||||||||| Sbjct: 21760786 ggaggaggagcagcagcagc 21760805
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||||||||| || || |||||||| Sbjct: 288476 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 288525 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 agaggagtggaggaggaggagcag 40 ||||||| |||||||||||||||| Sbjct: 11752603 agaggagaggaggaggaggagcag 11752626
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||||||||| || || |||||||| Sbjct: 40314 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 40363
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||||||||| || || |||||||| Sbjct: 130146 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 130195
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 32534 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 32485
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 64760 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 64711
>dbj|AK106913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A09, full insert sequence Length = 1950 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||||||||| || || |||||||| Sbjct: 917 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatgg 966
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaaggatgg 452 |||| ||||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 557 tgcggcttcccggtgtgccgcccctgctacgagtacgagcgcaaggatgg 606
>ref|NM_120095.2| Arabidopsis thaliana CESA2; cellulose synthase/ transferase, transferring glycosyl groups AT4G39350 (CESA2) mRNA, complete cds Length = 3726 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 383 tctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaac 442 |||||||||| ||||| || ||||| |||||||| || | || |||||||||||||||| Sbjct: 330 tctttgttgcttgcaacgaatgcgcattcccggtttgtagaccatgctatgagtatgaac 389 Query: 443 g 443 | Sbjct: 390 g 390
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 169 gcctgcaacgagtgcgccttccccgtctgccgc 201
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds Length = 3991 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 385 tttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaa 441 |||||||| |||||||| || || ||||| || ||| | |||||||||||||||||| Sbjct: 614 tttgttgcttgcaatgaatgtgcgttccctgtgtgcagaccttgctatgagtatgaa 670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 34874301 gcctgcaacgagtgcgccttccccgtctgccgc 34874333 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 23 gtggaggaggaggagcagcagcagcggcggc 53 ||||||||||| |||||||||||| |||||| Sbjct: 25597928 gtggaggaggaagagcagcagcagtggcggc 25597958 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagc 47 |||||||||||||||||||||| Sbjct: 8831548 gaggaggaggagcagcagcagc 8831569 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tggaggaggaggagcagcag 43 |||||||||||||||||||| Sbjct: 29494306 tggaggaggaggagcagcag 29494287 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agcagcagcagcggcggcat 55 |||||||||||||||||||| Sbjct: 26000794 agcagcagcagcggcggcat 26000775 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 20 ggagtggaggaggaggagcagcagcagc 47 ||||||||| ||||| |||||||||||| Sbjct: 22034933 ggagtggagcaggagcagcagcagcagc 22034960
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 243 gcctgcaacgagtgcgccttccccgtctgccgc 275
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 383 tctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaac 442 |||||||||| ||||| || ||||| |||||||| || | || |||||||||||||||| Sbjct: 17915 tctttgttgcttgcaacgaatgcgcattcccggtttgtagaccatgctatgagtatgaac 17974 Query: 443 g 443 | Sbjct: 17975 g 17975
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 383 tctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaac 442 |||||||||| ||||| || ||||| |||||||| || | || |||||||||||||||| Sbjct: 80438 tctttgttgcttgcaacgaatgcgcattcccggtttgtagaccatgctatgagtatgaac 80497 Query: 443 g 443 | Sbjct: 80498 g 80498
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 34964373 gcctgcaacgagtgcgccttccccgtctgccgc 34964405 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 23 gtggaggaggaggagcagcagcagcggcggc 53 ||||||||||| |||||||||||| |||||| Sbjct: 25689237 gtggaggaggaagagcagcagcagtggcggc 25689267 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagc 47 |||||||||||||||||||||| Sbjct: 8829383 gaggaggaggagcagcagcagc 8829404 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tggaggaggaggagcagcag 43 |||||||||||||||||||| Sbjct: 29585728 tggaggaggaggagcagcag 29585709 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 agcagcagcagcggcggcat 55 |||||||||||||||||||| Sbjct: 26092103 agcagcagcagcggcggcat 26092084 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 20 ggagtggaggaggaggagcagcagcagc 47 ||||||||| ||||| |||||||||||| Sbjct: 22027962 ggagtggagcaggagcagcagcagcagc 22027989
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 141179 gcctgcaacgagtgcgccttccccgtctgccgc 141147
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 391 gcctgcaatgagtgcgccttcccggtctgccgc 423 |||||||| |||||||||||||| ||||||||| Sbjct: 339 gcctgcaacgagtgcgccttccccgtctgccgc 371
>gb|AF027173.1|AF027173 Arabidopsis thaliana cellulose synthase catalytic subunit (Ath-A) mRNA, complete cds Length = 3771 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 383 tctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatgaac 442 |||||||||| ||||| || ||||| |||||||| || | || |||||||||||||||| Sbjct: 377 tctttgttgcttgcaacgaatgcgcattcccggtttgtagaccatgctatgagtatgaac 436 Query: 443 g 443 | Sbjct: 437 g 437
>ref|XM_480091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 309 gaggaggaggagcagcagcagcgg 332
>ref|XM_478919.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 331 gaggaggaggagcagcagcagcgg 354
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagcggcggcatt 56 ||||||||||||||||||||||| || ||||| Sbjct: 92276 ggaggaggaggagcagcagcagcagcagcatt 92307
>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence Length = 168850 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 aggaggagcagcagcagcggcggc 53 |||||||||||||||||||||||| Sbjct: 65705 aggaggagcagcagcagcggcggc 65682
>gb|AC099038.2| Drosophila melanogaster clone BACR28A23, complete sequence Length = 164826 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 aggaggagcagcagcagcggcggc 53 |||||||||||||||||||||||| Sbjct: 37517 aggaggagcagcagcagcggcggc 37540
>ref|NM_132817.1| Drosophila melanogaster CG9215-RA (CG9215), mRNA Length = 1943 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 aggaggagcagcagcagcggcggc 53 |||||||||||||||||||||||| Sbjct: 443 aggaggagcagcagcagcggcggc 420
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 2688225 gaggaggaggagcagcagcagcgg 2688248
>gb|BT004837.1| Drosophila melanogaster RH47711 full insert cDNA Length = 1955 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 30 aggaggagcagcagcagcggcggc 53 |||||||||||||||||||||||| Sbjct: 439 aggaggagcagcagcagcggcggc 416
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 394 tgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||| |||||||||||||| ||||||||| | ||||| ||||| Sbjct: 391 tgcaacgagtgcgccttccccgtctgccgcgcctgctacgagta 434
>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470H09 Length = 141257 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 66506 gaggaggaggagcagcagcagcgg 66529
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 98818 gaggaggaggagcagcagcagcgg 98841
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 gaggaggaggagcagcagcagcgg 49 |||||||||||||||||||||||| Sbjct: 9134 gaggaggaggagcagcagcagcgg 9157
>gb|AY107033.1| Zea mays PCO070211 mRNA sequence Length = 420 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 24 tggaggaggaggagcagcagcagc 47 |||||||||||||||||||||||| Sbjct: 225 tggaggaggaggagcagcagcagc 248
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 394 tgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||| |||||||||||||| ||||||||| | ||||| ||||| Sbjct: 378 tgcaacgagtgcgccttccccgtctgccgcgcctgctacgagta 421
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete sequence Length = 300896 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 30 aggaggagcagcagcagcggcggc 53 |||||||||||||||||||||||| Sbjct: 177523 aggaggagcagcagcagcggcggc 177546
>gb|U29397.1|RNU29397 Rattus norvegicus plasma membrane Ca2+ ATPase isoform 3 (PMCA3) gene, 5' flanking region Length = 3126 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagcg 48 |||||||||||||||||||||||| Sbjct: 2641 ggaggaggaggagcagcagcagcg 2618
>emb|AL583883.12| Mouse DNA sequence from clone RP23-400F7 on chromosome 15, complete sequence Length = 209857 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagcggcggcatt 56 ||||||||||||||||||||||| || ||||| Sbjct: 184098 ggaggaggaggagcagcagcagcagcagcatt 184067
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups AT4G32410 (CESA1) mRNA, complete cds Length = 3912 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 379 gatgtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||||||||| || || ||||| || |||||||| || || || |||||||||||||| Sbjct: 434 gatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatgagta 492
>gb|DQ101592.1| Anopheles gambiae isolate G159 ENSANGG00000006107 gene, intron Length = 534 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 411 aggagcagcagcagcggcggcat 389
>gb|DQ101591.1| Anopheles gambiae isolate G113 ENSANGG00000006107 gene, intron Length = 544 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 413 aggagcagcagcagcggcggcat 391
>gb|DQ101589.1| Anopheles gambiae isolate Bb3 ENSANGG00000006107 gene, intron Length = 543 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 410 aggagcagcagcagcggcggcat 388
>gb|DQ101588.1| Anopheles gambiae isolate Bb11 ENSANGG00000006107 gene, intron Length = 544 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 411 aggagcagcagcagcggcggcat 389
>gb|DQ101587.1| Anopheles gambiae isolate G231 ENSANGG00000006107 gene, intron Length = 539 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 406 aggagcagcagcagcggcggcat 384
>gb|DQ101586.1| Anopheles gambiae isolate Bc2 ENSANGG00000006107 gene, intron Length = 540 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 407 aggagcagcagcagcggcggcat 385
>gb|DQ101585.1| Anopheles gambiae isolate G15 ENSANGG00000006107 gene, intron Length = 546 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 409 aggagcagcagcagcggcggcat 387
>gb|DQ101583.1| Anopheles gambiae isolate G98 ENSANGG00000006107 gene, intron Length = 539 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 406 aggagcagcagcagcggcggcat 384
>gb|DQ101574.1| Anopheles gambiae isolate Bc3 ENSANGG00000006107 gene, intron Length = 542 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 413 aggagcagcagcagcggcggcat 391
>gb|DQ101573.1| Anopheles gambiae isolate Mb2 ENSANGG00000006107 gene, intron Length = 551 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 410 aggagcagcagcagcggcggcat 388
>gb|DQ101563.1| Anopheles gambiae isolate G51 ENSANGG00000006107 gene, intron Length = 555 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 406 aggagcagcagcagcggcggcat 384
>gb|DQ101562.1| Anopheles gambiae isolate G131 ENSANGG00000006107 gene, intron Length = 543 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 408 aggagcagcagcagcggcggcat 386
>gb|DQ101560.1| Anopheles gambiae isolate G155 ENSANGG00000006107 gene, intron Length = 541 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 404 aggagcagcagcagcggcggcat 382
>gb|DQ101559.1| Anopheles gambiae isolate G52 ENSANGG00000006107 gene, intron Length = 550 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 407 aggagcagcagcagcggcggcat 385
>gb|DQ101558.1| Anopheles gambiae isolate Bb4 ENSANGG00000006107 gene, intron Length = 540 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 405 aggagcagcagcagcggcggcat 383
>gb|DQ101556.1| Anopheles gambiae isolate G103 ENSANGG00000006107 gene, intron Length = 546 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 407 aggagcagcagcagcggcggcat 385
>gb|DQ101555.1| Anopheles gambiae isolate G164 ENSANGG00000006107 gene, intron Length = 545 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 406 aggagcagcagcagcggcggcat 384
>gb|DQ101554.1| Anopheles gambiae isolate Bc1 ENSANGG00000006107 gene, intron Length = 541 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 406 aggagcagcagcagcggcggcat 384
>gb|DQ101553.1| Anopheles gambiae isolate G45 ENSANGG00000006107 gene, intron Length = 550 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 409 aggagcagcagcagcggcggcat 387
>gb|DQ101552.1| Anopheles gambiae isolate G114 ENSANGG00000006107 gene, intron Length = 549 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 aggagcagcagcagcggcggcat 55 ||||||||||||||||||||||| Sbjct: 408 aggagcagcagcagcggcggcat 386
>gb|AC168091.3| Mus musculus BAC clone RP23-163F18 from chromosome 14, complete sequence Length = 227936 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 56812 ggaggaggaggagcagcagcagc 56834
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 17105 ggaggaggaggagcagcagcagc 17083
>gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome 17, complete sequence Length = 171242 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 70812 ggaggaggaggagcagcagcagc 70790
>gb|DQ089689.1| Chionodraco myersi hypoxia inducible factor 1 alpha mRNA, partial cds Length = 1237 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 85 ggaggaggaggagcagcagcagc 107 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 agtggaggaggaggagcagcagcag 46 ||||||||||||| ||||||||||| Sbjct: 55 agtggaggaggagcagcagcagcag 79 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ggaggaggagcagcagcagc 47 |||||||||||||||||||| Sbjct: 58 ggaggaggagcagcagcagc 77
>gb|AC102457.11| Mus musculus chromosome 19, clone RP24-312C18, complete sequence Length = 147128 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 85576 ggaggaggaggagcagcagcagc 85554
>gb|AC168050.2| Mus musculus BAC clone RP23-335J23 from chromosome 18, complete sequence Length = 228033 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 214438 ggaggaggaggagcagcagcagc 214460 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 214081 ggaggaggaggagcagcagcagc 214103
>gb|AC161363.7| Mus musculus BAC clone RP24-554L15 from chromosome 6, complete sequence Length = 209193 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 199566 ggaggaggaggagcagcagcagc 199588
>ref|XM_469124.1| Oryza sativa (japonica cultivar-group), mRNA Length = 321 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 23 gtggaggaggaggagcagcagcagcggcggc 53 ||||||||||| |||||||||||| |||||| Sbjct: 6 gtggaggaggaagagcagcagcagtggcggc 36
>ref|XM_450549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1358 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 198 ggaggaggaggagcagcagcagc 220
>gb|AC121319.9| Mus musculus chromosome 15, clone RP24-435O18, complete sequence Length = 159038 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 49303 ggaggaggaggagcagcagcagc 49281
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 143688 ggaggaggaggagcagcagcagc 143666
>gb|U75701.1|HSU75701 Homo sapiens SEF2-1B (SEF2-1B) gene, partial cds Length = 1570 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 198 ggaggaggaggagcagcagcagc 176
>gb|AF020274.1| Homo sapiens expanded CAG repeat Length = 408 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 183 ggaggaggaggagcagcagcagc 161
>gb|AC156992.13| Mus musculus chromosome 7, clone RP23-474C17, complete sequence Length = 178169 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 120089 ggaggaggaggagcagcagcagc 120111
>gb|AC133880.7| Mus musculus chromosome 15, clone RP24-142B13, complete sequence Length = 135091 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 133858 ggaggaggaggagcagcagcagc 133836
>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence Length = 172369 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 25848 ggaggaggaggagcagcagcagc 25826
>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence Length = 196891 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 52191 ggaggaggaggagcagcagcagc 52213
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 23292 ggaggaggaggagcagcagcagc 23314
>gb|AC164101.4| Mus musculus BAC clone RP23-421F16 from chromosome 8, complete sequence Length = 218236 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 104058 ggaggaggaggagcagcagcagc 104036
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence Length = 210979 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 8349 ggaggaggaggagcagcagcagc 8371
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 216568 ggaggaggaggagcagcagcagc 216590
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 45357 ggaggaggaggagcagcagcagc 45335
>gb|AC114655.12| Mus musculus chromosome 1, clone RP24-160J12, complete sequence Length = 162542 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 13113 ggaggaggaggagcagcagcagc 13091
>gb|AC130138.9| Rattus norvegicus 2 BAC CH230-204B23 (Children's Hospital Oakland Research Institute) complete sequence Length = 189178 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 109525 ggaggaggaggagcagcagcagc 109547
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 122182 ggaggaggaggagcagcagcagc 122160
>ref|XM_366755.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02831.4) partial mRNA Length = 1887 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 423 ggaggaggaggagcagcagcagc 445
>ref|XM_363399.1| Magnaporthe grisea 70-15 hypothetical protein (MG01325.4) partial mRNA Length = 819 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 570 ggaggaggaggagcagcagcagc 592
>gb|AC132313.5| Mus musculus BAC clone RP24-298L6 from chromosome 18, complete sequence Length = 157754 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 28238 ggaggaggaggagcagcagcagc 28216 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 27881 ggaggaggaggagcagcagcagc 27859
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 12365 ggaggaggaggagcagcagcagc 12387
>gb|AC144542.4| Mus musculus BAC clone RP24-177K17 from chromosome 6, complete sequence Length = 177339 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 149796 ggaggaggaggagcagcagcagc 149818
>ref|XM_954385.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 417 ggaggaggaggagcagcagcagc 439
>ref|XM_331090.1| Neurospora crassa OR74A hypothetical protein (NCU02315.1) partial mRNA Length = 4173 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 417 ggaggaggaggagcagcagcagc 439
>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence Length = 152497 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 142263 ggaggaggaggagcagcagcagc 142285
>gb|AY450292.1| Lagothrix lagotricha clone 311 microsatellite sequence Length = 552 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 405 ggaggaggaggagcagcagcagc 427
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 204805 ggaggaggaggagcagcagcagc 204783
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 49544 ggaggaggaggagcagcagcagc 49522
>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence Length = 195146 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 90821 ggaggaggaggagcagcagcagc 90843
>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence Length = 192769 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 97897 ggaggaggaggagcagcagcagc 97875
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 23 gtggaggaggaggagcagcagcagcggcggc 53 ||||||||||| |||||||||||| |||||| Sbjct: 104423 gtggaggaggaagagcagcagcagtggcggc 104393
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 403 tgcgccttcccggtctgccgcccttgctatgagtatgaacgcaagga 449 ||||||||||| |||||||| || ||||| ||||| || |||||||| Sbjct: 79 tgcgccttccccgtctgccggccctgctacgagtacgagcgcaagga 125
>gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 216935 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 51767 ggaggaggaggagcagcagcagc 51745
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 197553 ggaggaggaggagcagcagcagc 197575
>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence Length = 240536 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 82950 ggaggaggaggagcagcagcagc 82928
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 177217 ggaggaggaggagcagcagcagc 177239
>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence Length = 222814 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 144688 ggaggaggaggagcagcagcagc 144710
>gb|AC132418.3| Mus musculus BAC clone RP23-251N2 from chromosome 18, complete sequence Length = 206588 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 181394 ggaggaggaggagcagcagcagc 181372
>ref|XM_755190.1| Ustilago maydis 521 hypothetical protein (UM04136.1) partial mRNA Length = 2388 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 116 ggaggaggaggagcagcagcagc 94
>gb|AC123791.4| Mus musculus BAC clone RP24-304L14 from chromosome 15, complete sequence Length = 149316 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 103474 ggaggaggaggagcagcagcagc 103452
>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence Length = 185210 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 143719 ggaggaggaggagcagcagcagc 143697
>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence Length = 195696 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 15953 ggaggaggaggagcagcagcagc 15975
>ref|XM_538345.2| PREDICTED: Canis familiaris similar to transcription factor 20 isoform 2, transcript variant 1 (LOC481224), mRNA Length = 5880 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 5292 ggaggaggaggagcagcagcagc 5314
>ref|XM_852361.1| PREDICTED: Canis familiaris similar to transcription factor 20 isoform 2, transcript variant 2 (LOC481224), mRNA Length = 6027 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 5292 ggaggaggaggagcagcagcagc 5314
>gb|BC042485.1| Mus musculus transcription factor 20, mRNA (cDNA clone IMAGE:5368926), containing frame-shift errors Length = 4760 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 2943 ggaggaggaggagcagcagcagc 2965
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete sequence Length = 157435 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 119691 ggaggaggaggagcagcagcagc 119669
>gb|AC125316.4| Mus musculus BAC clone RP24-250N3 from chromosome 3, complete sequence Length = 138128 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 82733 ggaggaggaggagcagcagcagc 82711
>gb|AC117256.4| Mus musculus BAC clone RP24-483G23 from chromosome 16, complete sequence Length = 167118 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 80384 ggaggaggaggagcagcagcagc 80362
>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence Length = 214268 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 167879 ggaggaggaggagcagcagcagc 167857
>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence Length = 141017 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 11052 ggaggaggaggagcagcagcagc 11030
>gb|AC122347.4| Mus musculus BAC clone RP23-368O1 from chromosome 5, complete sequence Length = 191186 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 86350 ggaggaggaggagcagcagcagc 86372
>gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, complete sequence Length = 211348 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 160321 ggaggaggaggagcagcagcagc 160343
>gb|AC122023.3| Mus musculus BAC clone RP24-372O13 from 12, complete sequence Length = 179947 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 171067 ggaggaggaggagcagcagcagc 171089
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 86273 ggaggaggaggagcagcagcagc 86295
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 62610 ggaggaggaggagcagcagcagc 62588
>gb|AC073205.6| Homo sapiens BAC clone RP11-323K15 from 7, complete sequence Length = 149914 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 89657 ggaggaggaggagcagcagcagc 89679
>gb|AC100550.7| Mus musculus chromosome 9, clone RP23-152P11, complete sequence Length = 188119 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 95908 ggaggaggaggagcagcagcagc 95930
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 44475 ggaggaggaggagcagcagcagc 44453
>gb|AC154766.2| Mus musculus BAC clone RP24-440G8 from chromosome 17, complete sequence Length = 166224 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 84046 ggaggaggaggagcagcagcagc 84068
>gb|AC166176.5| Mus musculus 6 BAC RP24-325F2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190157 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 62011 ggaggaggaggagcagcagcagc 62033
>gb|AC113279.7| Mus musculus chromosome 3, clone RP23-389J8, complete sequence Length = 198009 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 144922 ggaggaggaggagcagcagcagc 144900
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 132341 ggaggaggaggagcagcagcagc 132363
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 82859 ggaggaggaggagcagcagcagc 82837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aggaggaggagcagcagcagc 47 ||||||||||||||||||||| Sbjct: 82989 aggaggaggagcagcagcagc 82969
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 123487 ggaggaggaggagcagcagcagc 123465
>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence Length = 206016 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 134849 ggaggaggaggagcagcagcagc 134871
>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170925 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 153213 ggaggaggaggagcagcagcagc 153235
>ref|XM_794904.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC578388 (LOC578388), partial mRNA Length = 224 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 171 ggaggaggaggagcagcagcagc 193
>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a novel FLJ21562 containing gene, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 145481 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 76984 ggaggaggaggagcagcagcagc 76962
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 13665 ggaggaggaggagcagcagcagc 13643
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 22517 ggaggaggaggagcagcagcagc 22495
>emb|AL031687.17|HS998H6 Human DNA sequence from clone RP5-998H6 on chromosome 20q13.1 Contains the CDH22 gene for cadherin-like 22, a novel gene and two CpG islands, complete sequence Length = 147815 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 43580 ggaggaggaggagcagcagcagc 43558
>gb|AC158590.3| Mus musculus chromosome 5, clone RP24-388K6, complete sequence Length = 186514 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 42339 ggaggaggaggagcagcagcagc 42361
>emb|X99207.1|DMSMMIN D.melanogaster mRNA for AAA member of ATPase Length = 3184 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 519 ggaggaggaggagcagcagcagc 497
>gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, complete sequence Length = 193245 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 24593 ggaggaggaggagcagcagcagc 24615
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 232267 ggaggaggaggagcagcagcagc 232245
>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 3/11 Length = 340493 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 252869 ggaggaggaggagcagcagcagc 252847 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 252799 ggaggaggaggagcagcagcagc 252777 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 252763 ggaggaggaggagcagcagcagc 252741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagca 45 ||||||||||||||||||||| Sbjct: 252690 ggaggaggaggagcagcagca 252670 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagca 45 ||||||||||||||||||||| Sbjct: 252602 ggaggaggaggagcagcagca 252582 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagca 45 ||||||||||||||||||||| Sbjct: 252541 ggaggaggaggagcagcagca 252521 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagca 45 ||||||||||||||||||||| Sbjct: 252477 ggaggaggaggagcagcagca 252457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 aggaggaggagcagcagcagc 47 ||||||||||||||||||||| Sbjct: 222790 aggaggaggagcagcagcagc 222770 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 ggagtggaggaggaggagcagcagcagc 47 |||| ||||||||||||| ||||||||| Sbjct: 252807 ggaggggaggaggaggaggagcagcagc 252780 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 ggagtggaggaggaggagcagcagcagc 47 |||| ||||||||||||| ||||||||| Sbjct: 252698 ggaggggaggaggaggaggagcagcagc 252671 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 ggagtggaggaggaggagcagcagcagc 47 |||| ||||||||||||| ||||||||| Sbjct: 252549 ggaggggaggaggaggaggagcagcagc 252522 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagcg 48 |||||||||| ||||||||||||| Sbjct: 222789 ggaggaggagcagcagcagcagcg 222766
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 166195 ggaggaggaggagcagcagcagc 166217
>gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome 12, complete sequence Length = 170371 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 103582 ggaggaggaggagcagcagcagc 103604
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 gatgtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||||||||| || || ||||| || |||||||| || || || |||||||||||||| Sbjct: 59714 gatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatgagta 59656
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 gatgtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||||||||| || || ||||| || |||||||| || || || |||||||||||||| Sbjct: 45997 gatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatgagta 45939
>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for ribosomal protein L27a and KIAA0298 gene Length = 275434 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 229369 ggaggaggaggagcagcagcagc 229347
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 379 gatgtctttgttgcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagta 437 ||||||||||| || || ||||| || |||||||| || || || |||||||||||||| Sbjct: 301 gatgtctttgtcgcgtgtaatgaatgtgccttccctgtgtgtcggccttgctatgagta 359
>emb|AJ251835.1|MMU251835 Mus musculus Kcnq1, Ltrpc5, Mash2, Tapa-1, Tssc4 and Tssc6 genes, alternative transcripts Length = 249487 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 153663 ggaggaggaggagcagcagcagc 153685
>gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome 9, complete sequence Length = 223852 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 222617 ggaggaggaggagcagcagcagc 222595
>gb|AC158296.6| Mus musculus chromosome 7, clone RP24-78M9, complete sequence Length = 201897 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 107442 ggaggaggaggagcagcagcagc 107464
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains the gene for reversion induced LIM protein (Ril), the Slc22a4 and Slc22a9 genes for solute carrier family 22 (organic cation transporter), members 4 and 9, a Sin3-associated polypeptide 18 (Sap18) pseudogene, a pseudogene similar to part of solute carrier family 22 (organic cation transporter), member 4 Slc22a4 and two CpG islands, complete sequence Length = 171301 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 79935 ggaggaggaggagcagcagcagc 79913
>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 166549 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 84655 ggaggaggaggagcagcagcagc 84633
>emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on chromosome 1 Contains part of the gene for ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and a novel gene, complete sequence Length = 155204 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 150918 ggaggaggaggagcagcagcagc 150896
>emb|AL606470.15| Mouse DNA sequence from clone RP23-293J11 on chromosome 11 Contains a Friedreich ataxia protein (Frda) pseudogene, complete sequence Length = 203970 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 77409 ggaggaggaggagcagcagcagc 77387
>emb|AL591177.14| Mouse DNA sequence from clone RP23-399H5 on chromosome 11, complete sequence Length = 193004 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 102968 ggaggaggaggagcagcagcagc 102990 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 agtggaggaggaggagcagcagcagc 47 |||||||||||||||| ||||||||| Sbjct: 102962 agtggaggaggaggaggagcagcagc 102987
>gb|AC161503.4| Mus musculus chromosome 8, clone RP23-81C3, complete sequence Length = 180580 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 26407 ggaggaggaggagcagcagcagc 26429
>gb|DQ099107.1| Arachis stenosperma clone AS1RN21H01 microsatellite sequence Length = 544 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 94 ggaggaggaggagcagcagcagc 72
>gb|AC163291.3| Mus musculus BAC clone RP23-263M4 from chromosome 15, complete sequence Length = 208289 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 43801 ggaggaggaggagcagcagcagc 43779
>gb|AC125062.5| Mus musculus BAC clone RP23-419P12 from chromosome 5, complete sequence Length = 187329 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 161198 ggaggaggaggagcagcagcagc 161176
>gb|AC104702.2| Drosophila melanogaster 3L BAC RP98-11B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153146 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 128789 ggaggaggaggagcagcagcagc 128767
>gb|AC010557.4| Drosophila melanogaster 3L BAC RP98-9E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169425 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 50240 ggaggaggaggagcagcagcagc 50218
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 17 agaggagtggaggaggaggagcagcag 43 ||||||| ||||||||||||||||||| Sbjct: 116974 agaggagaggaggaggaggagcagcag 116948
>ref|NM_206287.1| Drosophila melanogaster smallminded CG8571-RB, transcript variant B (smid), mRNA Length = 3162 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 541 ggaggaggaggagcagcagcagc 519
>ref|NM_141658.3| Drosophila melanogaster CG8301-RA (CG8301), mRNA Length = 3005 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 1128 ggaggaggaggagcagcagcagc 1150
>gb|AY094804.1| Drosophila melanogaster LD25464 full insert cDNA Length = 2950 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 1091 ggaggaggaggagcagcagcagc 1113
>ref|NM_079235.2| Drosophila melanogaster smallminded CG8571-RA, transcript variant A (smid), mRNA Length = 3172 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 551 ggaggaggaggagcagcagcagc 529
>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence Length = 188095 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 141763 ggaggaggaggagcagcagcagc 141785
>gb|AY075495.1| Drosophila melanogaster RE47719 full length cDNA Length = 3179 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 551 ggaggaggaggagcagcagcagc 529
>gb|AF358671.1|AF358671 Mus musculus edar-associated death domain protein (Edaradd) mRNA, complete cds Length = 1605 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 343 ggaggaggaggagcagcagcagc 365
>dbj|AK148351.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370103G13 product:EDAR (ectodysplasin-A receptor)-associated death domain, full insert sequence Length = 2321 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 171 ggaggaggaggagcagcagcagc 193
>dbj|AK152165.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830053D05 product:transcription factor 20, full insert sequence Length = 2594 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 743 ggaggaggaggagcagcagcagc 765
>gb|AC160059.7| Mus musculus 6 BAC RP23-172L21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 212292 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 111499 ggaggaggaggagcagcagcagc 111521
>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene Length = 24391 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 8560 ggaggaggaggagcagcagcagc 8582
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 118698 ggaggaggaggagcagcagcagc 118676
>gb|AC154473.2| Mus musculus BAC clone RP24-120O11 from chromosome 16, complete sequence Length = 190965 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 165526 ggaggaggaggagcagcagcagc 165504 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tggaggaggaggagcagcagcagc 47 |||||||||||||| ||||||||| Sbjct: 165530 tggaggaggaggaggagcagcagc 165507
>gb|AC154732.3| Mus musculus BAC clone RP24-380F18 from chromosome 12, complete sequence Length = 172458 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 135621 ggaggaggaggagcagcagcagc 135599
>gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosome 12, complete sequence Length = 177570 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 167881 ggaggaggaggagcagcagcagc 167859
>dbj|AK052070.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230041N05 product:unclassifiable, full insert sequence Length = 1811 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 1211 ggaggaggaggagcagcagcagc 1233
>gb|AC152959.2| Mus musculus 6 BAC RP23-78B5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206857 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 40744 ggaggaggaggagcagcagcagc 40722
>gb|AC018994.7|AC018994 Homo sapiens chromosome 18, clone RP11-619L19, complete sequence Length = 166451 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 139722 ggaggaggaggagcagcagcagc 139744
>dbj|AK042414.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089O21 product:Ectodysplasia A receptor associated death domain, full insert sequence Length = 1696 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 312 ggaggaggaggagcagcagcagc 334
>dbj|AK042128.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630061D19 product:EDAR-ASSOCIATED DEATH DOMAIN PROTEIN homolog [Mus musculus], full insert sequence Length = 1564 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 7 ggaggaggaggagcagcagcagc 29
>gb|AC153473.2| Homo sapiens chromosome 17 clone WI2-2840F4, complete sequence Length = 40815 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 27104 ggaggaggaggagcagcagcagc 27082
>dbj|AK041545.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630020E19 product:EDAR-ASSOCIATED DEATH DOMAIN PROTEIN homolog [Mus musculus], full insert sequence Length = 1660 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 283 ggaggaggaggagcagcagcagc 305
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 147033 ggaggaggaggagcagcagcagc 147011
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence Length = 175021 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 143106 ggaggaggaggagcagcagcagc 143128 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 28722 ggaggaggaggagcagcagcagc 28700
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 24778013 ggaggaggaggagcagcagcagc 24778035 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcag 46 |||||||||||||||||||||| Sbjct: 26994561 ggaggaggaggagcagcagcag 26994582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agcagcagcagcggcggcat 55 |||||||||||||||||||| Sbjct: 17212576 agcagcagcagcggcggcat 17212595
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 18 gaggagtggaggaggaggagcagcagc 44 |||||| |||||||||||||||||||| Sbjct: 13585799 gaggagaggaggaggaggagcagcagc 13585773 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 9599555 ggaggaggaggagcagcagcagc 9599577 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 agaggagtggaggaggaggag 37 ||||||||||||||||||||| Sbjct: 5337747 agaggagtggaggaggaggag 5337727 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagca 45 ||||||||||||||||||||| Sbjct: 853745 ggaggaggaggagcagcagca 853725
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 405 cgccttcccggtctgccgccctt 427 ||||||||||||||||||||||| Sbjct: 2092873 cgccttcccggtctgccgccctt 2092895
>gb|AC009350.4|AC009350 Drosophila melanogaster, chromosome 3R, region 85D-85E, BAC clone BACR19N07, complete sequence Length = 176933 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 92203 ggaggaggaggagcagcagcagc 92225
>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159299 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 90427 ggaggaggaggagcagcagcagc 90405
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 126325 ggaggaggaggagcagcagcagc 126347
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 37554 ggaggaggaggagcagcagcagc 37576
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 36731 ggaggaggaggagcagcagcagc 36709
>gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185708 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 59385 ggaggaggaggagcagcagcagc 59407
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence Length = 209970 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 208424 ggaggaggaggagcagcagcagc 208446 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tggaggaggaggagcagcagcagc 47 |||||||||||||| ||||||||| Sbjct: 208420 tggaggaggaggaggagcagcagc 208443
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 139742 ggaggaggaggagcagcagcagc 139720
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 198759 ggaggaggaggagcagcagcagc 198737
>gb|AC156831.2| Mus musculus BAC clone RP24-276N6 from chromosome 9, complete sequence Length = 152361 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 57726 ggaggaggaggagcagcagcagc 57704
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 177190 ggaggaggaggagcagcagcagc 177168
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 41284 ggaggaggaggagcagcagcagc 41262
>gb|AY007594.1| Mus musculus stromelysin-1 PDGF-responsive element binding protein (Spbp) mRNA, complete cds Length = 6212 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 5564 ggaggaggaggagcagcagcagc 5586
>gb|AC010092.4| Homo sapiens BAC clone RP11-306M1 from 2, complete sequence Length = 140226 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 65965 ggaggaggaggagcagcagcagc 65987
>gb|AC129569.17| Mus musculus chromosome 5, clone RP23-121M13, complete sequence Length = 199799 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 58042 ggaggaggaggagcagcagcagc 58020
>gb|AC083809.21| Homo sapiens 12 BAC RP11-785D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136607 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 129222 ggaggaggaggagcagcagcagc 129244
>gb|AC106870.4| Homo sapiens BAC clone RP11-223F18 from 2, complete sequence Length = 143441 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 129652 ggaggaggaggagcagcagcagc 129674
>gb|AY119788.1| Mus musculus SMAD4 (Smad4) gene, complete cds Length = 58218 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 37269 ggaggaggaggagcagcagcagc 37247
>gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) mRNA, complete cds Length = 3452 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 394 tgcaatgagtgcgccttcccggtctgccgcccttgctatgagtatga 440 ||||||||||||| || ||||| || || ||||||||||||||||| Sbjct: 199 tgcaatgagtgcggatttccggtttgtcggccttgctatgagtatga 245
>ref|XM_345861.2| PREDICTED: Rattus norvegicus transcription factor 20 (Tcf20), mRNA Length = 7348 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 5575 ggaggaggaggagcagcagcagc 5597
>gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, complete sequence Length = 170211 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 97054 ggaggaggaggagcagcagcagc 97032
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 91267 ggaggaggaggagcagcagcagc 91245
>gb|BC080855.1| Mus musculus transcription factor 20, mRNA (cDNA clone IMAGE:6855247), partial cds Length = 4367 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 2690 ggaggaggaggagcagcagcagc 2712
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 18 gaggagtggaggaggaggagcagcagc 44 |||||| |||||||||||||||||||| Sbjct: 23215 gaggagaggaggaggaggagcagcagc 23189
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 18 gaggagtggaggaggaggagcagcagc 44 |||||| |||||||||||||||||||| Sbjct: 33785 gaggagaggaggaggaggagcagcagc 33759
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 39652 ggaggaggaggagcagcagcagc 39674
>gb|AF198569.1|AF198569 Orconectes punctimanus strain KC517/5 internal transcribed spacer 1, partial sequence Length = 623 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 378 ggaggaggaggagcagcagcagc 356
>gb|AF198568.1|AF198568 Orconectes punctimanus strain KC517/4 internal transcribed spacer 1, partial sequence Length = 684 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 393 ggaggaggaggagcagcagcagc 371
>gb|AF198567.1|AF198567 Orconectes punctimanus strain KC517/3 internal transcribed spacer 1, partial sequence Length = 682 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 393 ggaggaggaggagcagcagcagc 371
>gb|AF198566.1|AF198566 Orconectes punctimanus strain KC517/2 internal transcribed spacer 1, partial sequence Length = 684 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 393 ggaggaggaggagcagcagcagc 371
>gb|AF198565.1|AF198565 Orconectes punctimanus strain KC517/1 internal transcribed spacer 1, partial sequence Length = 686 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 396 ggaggaggaggagcagcagcagc 374
>gb|AF198552.1|AF198552 Orconectes luteus strain KC112/3 internal transcribed spacer 1, partial sequence Length = 670 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 385 ggaggaggaggagcagcagcagc 363
>gb|AF198551.1|AF198551 Orconectes luteus strain KC112/2 internal transcribed spacer 1, partial sequence Length = 603 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ggaggaggaggagcagcagcagc 47 ||||||||||||||||||||||| Sbjct: 371 ggaggaggaggagcagcagcagc 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,362,747 Number of Sequences: 3902068 Number of extensions: 4362747 Number of successful extensions: 150424 Number of sequences better than 10.0: 970 Number of HSP's better than 10.0 without gapping: 988 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 141848 Number of HSP's gapped (non-prelim): 8508 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
