>PAX8_RAT (P51974) Paired box protein Pax-8|
          Length = 458

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 285 SVSGSEPAVASDPAPPQRILRQPFLDLVMVGSGGSLAPHLP 163
           ++    P ++S  + P  +    FLDL  VGSGG     +P
Sbjct: 308 AIKQETPELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVP 348

>Y066_NPVLD (P30325) Hypothetical protein in POL 5'region (Fragment)|
          Length = 369

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 288 ASVSGSEPAVASDPAPPQRILRQPFLDLVMVGSGGSLA 175
           A ++ SEP  AS P+PP+     P    V + S G  A
Sbjct: 118 APIAPSEPTPASAPSPPKADAPNPIQQNVYINSAGEAA 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,063,655
Number of Sequences: 219361
Number of extensions: 459349
Number of successful extensions: 1307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)