>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
           complete cds
          Length = 3054

 Score =  476 bits (240), Expect = e-131
 Identities = 243/244 (99%)
 Strand = Plus / Plus

                                                                       
Query: 38  tgccaggtcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcaaccttc 97
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgccagggcagggttgcacagtctagctaggtcgaaaccaaccaagacggtgcaaccttc 60

                                                                       
Query: 98  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgacggcgacc 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgccccatcgcgtagcgcaatagccaacaccgtagcgtacccacgatgctgacggcgacc 120

                                                                       
Query: 158 aagccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagccgctagtcgggggcgcgtgtgccgcgccgtcgtcgtcggcccggcggaggacgttc 180

                                                                       
Query: 218 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccagtgtctccaaggtg 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggtgcccgaggctcgccggaaaccaggcaatggccgccgcaccagtgtctccaaggtg 240

               
Query: 278 ggca 281
           ||||
Sbjct: 241 ggca 244



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 320 ttgtccgccgactccaatggggcggccgttggcacggtaaccc 362
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtccgccgactccaatggggcggccgttggcacggtaaccc 325

>ref|NM_102798.1| Arabidopsis thaliana EMB2279 AT1G30610 (EMB2279) mRNA, complete cds
          Length = 3021

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 11   cttccatcacctcttcctttcctgatctgc 40
            ||||||||||||| |||||||||| |||||
Sbjct: 2689 cttccatcacctcctcctttcctgctctgc 2660

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 171    ggggcgcgtgtgccgcgccgtcgtcgtcg 199
              |||||||||||||||||||| || |||||
Sbjct: 996213 ggggcgcgtgtgccgcgccggcgccgtcg 996241

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 183      ccgcgccgtcgtcgtcggccc 203
                |||||||||||||||||||||
Sbjct: 11464690 ccgcgccgtcgtcgtcggccc 11464670

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 171     ggggcgcgtgtgccgcgccgtcgtcgtcg 199
               |||||||||||||||||||| || |||||
Sbjct: 2313682 ggggcgcgtgtgccgcgccggcgccgtcg 2313710

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   ccgcgccgtcgtcgtcggccc 203
             |||||||||||||||||||||
Sbjct: 15262 ccgcgccgtcgtcgtcggccc 15242

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 171     ggggcgcgtgtgccgcgccgtcgtcgtcg 199
               |||||||||||||||||||| || |||||
Sbjct: 1861233 ggggcgcgtgtgccgcgccggcgccgtcg 1861261

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 183      ccgcgccgtcgtcgtcggccc 203
                |||||||||||||||||||||
Sbjct: 11461453 ccgcgccgtcgtcgtcggccc 11461433

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 182    gccgcgccgtcgtcgtcggcc 202
              |||||||||||||||||||||
Sbjct: 293702 gccgcgccgtcgtcgtcggcc 293682

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 182     gccgcgccgtcgtcgtcggcc 202
               |||||||||||||||||||||
Sbjct: 2096821 gccgcgccgtcgtcgtcggcc 2096841



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     ccgcgccgtcgtcgtcggcc 202
               ||||||||||||||||||||
Sbjct: 4599530 ccgcgccgtcgtcgtcggcc 4599549

>gb|DQ396394.1| HIV-1 isolate 04ZAPS177MB1 from South Africa, complete genome
          Length = 9055

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   ctgatctgccaggtcagggt 51
            ||||||||||||||||||||
Sbjct: 4787 ctgatctgccaggtcagggt 4768

>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    cagtgtctccaaggtgggca 281
              ||||||||||||||||||||
Sbjct: 120647 cagtgtctccaaggtgggca 120628

>gb|DQ351226.1| HIV-1 isolate 03ZAPS025MB1 from South Africa, complete genome
          Length = 9081

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   ctgatctgccaggtcagggt 51
            ||||||||||||||||||||
Sbjct: 4766 ctgatctgccaggtcagggt 4747

>gb|DQ351222.1| HIV-1 isolate 02ZAPS013MB1 from South Africa, complete genome
          Length = 9022

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   ctgatctgccaggtcagggt 51
            ||||||||||||||||||||
Sbjct: 4768 ctgatctgccaggtcagggt 4749

>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
            hypothetical protein, putative NAM protein, putative
            cis-zeatin O-glucosyltransferases, putative small nuclear
            ribonucleoprotein, putative cis-zeatin
            O-glucosyltransferase, putative glutathione peroxidase,
            putative copper-exporting ATPases, putative
            serine/threonine dehydratase, and putative actin
            depolymerizing factor genes, complete cds; and
            hypothetical protein gene, partial cds
          Length = 157237

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  gtgccgcgccgtcgtcgtcg 199
            ||||||||||||||||||||
Sbjct: 4453 gtgccgcgccgtcgtcgtcg 4472

>gb|U90140.1|CBU90140 Citrobacter braakii TyrR (tyrR) gene, complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gatccttccatcacctcttc 26
            ||||||||||||||||||||
Sbjct: 1761 gatccttccatcacctcttc 1742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,883,433
Number of Sequences: 3902068
Number of extensions: 1883433
Number of successful extensions: 44757
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44341
Number of HSP's gapped (non-prelim): 416
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)