ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104964.12| Homo sapiens chromosome 8, clone RP11-981G7, complete sequence Length = 212226 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 gctggcgctgctgctgcctgcat 110 ||||||||||||||||||||||| Sbjct: 158031 gctggcgctgctgctgcctgcat 158053
>emb|CR598413.1| full-length cDNA clone CS0DF032YJ23 of Fetal brain of Homo sapiens (human) Length = 2628 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 gctggcgctgctgctgcctgcat 110 ||||||||||||||||||||||| Sbjct: 1699 gctggcgctgctgctgcctgcat 1677
>dbj|AK055360.1| Homo sapiens cDNA FLJ30798 fis, clone FEBRA2001161 Length = 2174 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 gctggcgctgctgctgcctgcat 110 ||||||||||||||||||||||| Sbjct: 1205 gctggcgctgctgctgcctgcat 1183
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence Length = 237281 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 catctctatgccctgccctgc 128 ||||||||||||||||||||| Sbjct: 78618 catctctatgccctgccctgc 78638
>ref|XM_533120.2| PREDICTED: Canis familiaris hematological and neurological expressed 1, transcript variant 1 (HN1), mRNA Length = 697 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgc 382 |||||||||||||| |||||||||| Sbjct: 104 gccgaggagcgaggtaggcaggcgc 80
>ref|XM_844577.1| PREDICTED: Canis familiaris hematological and neurological expressed 1, transcript variant 2 (HN1), mRNA Length = 1448 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgc 382 |||||||||||||| |||||||||| Sbjct: 104 gccgaggagcgaggtaggcaggcgc 80
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 ctgcctgcatctctatgccct 121 ||||||||||||||||||||| Sbjct: 404430 ctgcctgcatctctatgccct 404450
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 ggcgacgacctcgcgccgggc 437 ||||||||||||||||||||| Sbjct: 3853784 ggcgacgacctcgcgccgggc 3853764
>tpg|BK001558.1| TPA: TPA_inf: Canis familiaris HN1 mRNA, complete cds Length = 598 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgc 382 |||||||||||||| |||||||||| Sbjct: 106 gccgaggagcgaggtaggcaggcgc 82
>gb|AY952935.1| Expression vector pFNK-101, complete sequence Length = 4099 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggca 212 ||||||||||||||||||||| Sbjct: 1500 gcgagggcgagggcgacggca 1520
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 ggcgacgacctcgcgccgggc 437 ||||||||||||||||||||| Sbjct: 3854457 ggcgacgacctcgcgccgggc 3854437
>gb|DQ305103.1| RNAi cloning and transformation vector pFRiPE, complete sequence Length = 15857 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggca 212 ||||||||||||||||||||| Sbjct: 1880 gcgagggcgagggcgacggca 1900
>gb|U16803.1|HSU16803 Human unidentified genomic sequence Length = 1881 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ggagcgaggcaggcaggcgcc 383 ||||||||||||||||||||| Sbjct: 1802 ggagcgaggcaggcaggcgcc 1822
>ref|XM_512008.1| PREDICTED: Pan troglodytes similar to hematological and neurological expressed 1 isoform 1; androgen-regulated protein 2 (LOC455274), mRNA Length = 443 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 110 gccgaggagcgaggtaggctggcgccgg 83
>ref|NM_001003351.1| Canis familiaris laminin, gamma 2 (LAMC2), mRNA Length = 3974 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctggcgctgctgctgcctgc 108 |||||||||||||||||||| Sbjct: 169 ctggcgctgctgctgcctgc 188
>ref|NM_197067.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0012L23.61), mRNA Length = 684 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 368 gcgagggcgagggcgacggc 387
>gb|AF266847.1| Homo sapiens androgen-regulated protein 2 (ARM2) gene, complete cds Length = 19296 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 152 gccgaggagcgaggtaggctggcgccgg 125
>gb|AF266846.1| Homo sapiens androgen-regulated protein 2 (ARM2) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 112 gccgaggagcgaggtaggctggcgccgg 85
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 106459 gcgagggcgagggcgacggc 106478
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 145686 gcgagggcgagggcgacggc 145705
>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence Length = 190608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 acggcatctctctatatagc 226 |||||||||||||||||||| Sbjct: 57776 acggcatctctctatatagc 57795
>gb|BC001420.2| Homo sapiens hematological and neurological expressed 1, mRNA (cDNA clone MGC:696 IMAGE:3140086), complete cds Length = 704 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 101 gccgaggagcgaggtaggctggcgccgg 74
>gb|AF086910.2| Homo sapiens Hn1 mRNA, complete cds Length = 1621 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 283 gccgaggagcgaggtaggctggcgccgg 256
>emb|AJ251914.1|SSC251914 Sus scrofa MHC class I SLA genes, haplotype H01, clone BAC 493A6 Length = 158063 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tgccctgccctgctgccgcttctt 139 ||||||||||| |||||||||||| Sbjct: 132193 tgccctgcccttctgccgcttctt 132170
>gb|AF236864.2| Canis familiaris laminin-5 gamma 2 mRNA, complete cds Length = 3974 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctggcgctgctgctgcctgc 108 |||||||||||||||||||| Sbjct: 169 ctggcgctgctgctgcctgc 188
>gb|AY082802.1| Equus caballus laminin 5 gamma 2 subunit mRNA, complete cds Length = 3991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctggcgctgctgctgcctgc 108 |||||||||||||||||||| Sbjct: 233 ctggcgctgctgctgcctgc 252
>ref|NM_001002032.1| Homo sapiens hematological and neurological expressed 1 (HN1), transcript variant 2, mRNA Length = 1582 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 279 gccgaggagcgaggtaggctggcgccgg 252
>ref|NM_001002033.1| Homo sapiens hematological and neurological expressed 1 (HN1), transcript variant 3, mRNA Length = 1696 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 279 gccgaggagcgaggtaggctggcgccgg 252
>ref|NM_016185.2| Homo sapiens hematological and neurological expressed 1 (HN1), transcript variant 1, mRNA Length = 1602 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 280 gccgaggagcgaggtaggctggcgccgg 253
>emb|BX293535.3| Human DNA sequence from clone RP4-752I6 on chromosome 1 Contains the 5' end of the WASF2 gene for WAS protein family, member 2 and a novel gene, complete sequence Length = 71971 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 68654 gcgagggcgagggcgacggc 68635
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ccgctggcgctgctgctgcc 105 |||||||||||||||||||| Sbjct: 1579701 ccgctggcgctgctgctgcc 1579720
>emb|AL158038.10| Human DNA sequence from clone RP11-298H15 on chromosome 13q21.1-21.3, complete sequence Length = 160015 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggcctcctgagctggatgca 29 |||||||||||||||||||| Sbjct: 52912 ggcctcctgagctggatgca 52931
>gb|AY322170.1| Homo sapiens hematological and neurological expressed protein 1C (HN1) mRNA, complete cds; alternatively spliced Length = 1633 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 275 gccgaggagcgaggtaggctggcgccgg 248
>gb|AY322169.1| Homo sapiens hematological and neurological expressed protein 1B (HN1) mRNA, complete cds; alternatively spliced Length = 1519 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 275 gccgaggagcgaggtaggctggcgccgg 248
>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete sequence Length = 193444 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 ccgaggagcgaggcaggcaggcgccggg 386 |||||| || |||||||||||||||||| Sbjct: 2315 ccgaggggccaggcaggcaggcgccggg 2342
>gb|AF348672.2| Homo sapiens hematological and neurological expressed gene 1-like protein (HN1A) gene, complete cds; alternatively spliced Length = 19394 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 200 gccgaggagcgaggtaggctggcgccgg 173
>emb|AL034417.14|HS215D11 Human DNA sequence from clone CTA-215D11 on chromosome 1p36.12-36.33 Contains the PARK7 gene for Parkinson disease (autosomal recessive, early onset) 7, a novel gene, gene 33/Mig-6 (MIG-6), a ribosomal protein L7a (RPL7A) pseudogene, the 5' end of a novel gene (FLJ26758) and two CpG islands, complete sequence Length = 122279 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ccgcgcccccgctggcgctg 97 |||||||||||||||||||| Sbjct: 10659 ccgcgcccccgctggcgctg 10640
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 12265 gcgagggcgagggcgacggc 12246
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ctagcaccaccaccgctcgt 279 |||||||||||||||||||| Sbjct: 105538 ctagcaccaccaccgctcgt 105519
>emb|AL389891.1|NCB7F18 Neurospora crassa DNA linkage group I BAC clone B7F18 Length = 71088 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 30688 cccgctggcgctgctgctgc 30669
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 145590 gcgagggcgagggcgacggc 145609
>emb|CR626175.1| full-length cDNA clone CS0DI056YL13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1377 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 80 gccgaggagcgaggtaggctggcgccgg 53
>emb|CR625805.1| full-length cDNA clone CS0DI027YD06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1403 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR624118.1| full-length cDNA clone CS0DL003YE23 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1382 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 95 gccgaggagcgaggtaggctggcgccgg 68
>emb|CR623069.1| full-length cDNA clone CS0DI018YG02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1402 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR620568.1| full-length cDNA clone CS0DF007YD20 of Fetal brain of Homo sapiens (human) Length = 1417 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 95 gccgaggagcgaggtaggctggcgccgg 68
>emb|CR615505.1| full-length cDNA clone CS0DC025YH06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1397 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 100 gccgaggagcgaggtaggctggcgccgg 73
>emb|CR615283.1| full-length cDNA clone CS0DC013YH07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1402 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR613024.1| full-length cDNA clone CS0DF015YA24 of Fetal brain of Homo sapiens (human) Length = 959 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 106 gccgaggagcgaggtaggctggcgccgg 79
>emb|CR610842.1| full-length cDNA clone CS0DL009YF05 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 87 gccgaggagcgaggtaggctggcgccgg 60
>emb|CR608874.1| full-length cDNA clone CS0DI019YD21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR608252.1| full-length cDNA clone CS0DF005YG09 of Fetal brain of Homo sapiens (human) Length = 1416 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR604677.1| full-length cDNA clone CS0DC027YJ20 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1396 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 98 gccgaggagcgaggtaggctggcgccgg 71
>emb|CR605958.1| full-length cDNA clone CS0DI018YH02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1399 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 104 gccgaggagcgaggtaggctggcgccgg 77
>emb|CR605404.1| full-length cDNA clone CS0DF006YO14 of Fetal brain of Homo sapiens (human) Length = 1396 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 85 gccgaggagcgaggtaggctggcgccgg 58
>emb|CR605576.1| full-length cDNA clone CS0DK003YF24 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1426 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 100 gccgaggagcgaggtaggctggcgccgg 73
>emb|CR602662.1| full-length cDNA clone CS0DF001YG03 of Fetal brain of Homo sapiens (human) Length = 1112 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 95 gccgaggagcgaggtaggctggcgccgg 68
>emb|CR601210.1| full-length cDNA clone CS0DE013YF10 of Placenta of Homo sapiens (human) Length = 844 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 283 gccgaggagcgaggtaggctggcgccgg 256
>emb|CR596640.1| full-length cDNA clone CS0DL005YJ11 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1322 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 29 gccgaggagcgaggtaggctggcgccgg 2
>emb|CR594573.1| full-length cDNA clone CS0DH003YJ12 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1404 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 80 gccgaggagcgaggtaggctggcgccgg 53
>emb|CR594240.1| full-length cDNA clone CS0DI082YL19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1396 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 95 gccgaggagcgaggtaggctggcgccgg 68
>emb|CR594206.1| full-length cDNA clone CS0DF028YI07 of Fetal brain of Homo sapiens (human) Length = 1406 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 101 gccgaggagcgaggtaggctggcgccgg 74
>emb|CR592678.1| full-length cDNA clone CS0DD007YH16 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1500 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 98 gccgaggagcgaggtaggctggcgccgg 71
>emb|CR592277.1| full-length cDNA clone CS0DI037YO20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1396 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 98 gccgaggagcgaggtaggctggcgccgg 71
>emb|CR590585.1| full-length cDNA clone CS0DL006YA21 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1388 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 98 gccgaggagcgaggtaggctggcgccgg 71
>ref|NM_135320.2| Drosophila melanogaster CG7093-RA (CG7093), mRNA Length = 3336 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2479 cccgctggcgctgctgctgc 2460
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 141571 gcgagggcgagggcgacggc 141552
>tpg|BK001554.1| TPA: TPA_inf: Pan troglodytes HN1 mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 110 gccgaggagcgaggtaggctggcgccgg 83
>gb|AY051636.1| Drosophila melanogaster GH28569 full length cDNA Length = 1657 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 800 cccgctggcgctgctgctgc 781
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 44062 gccgaggagcgaggtaggctggcgccgg 44089
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ctagcaccaccaccgctcgt 279 |||||||||||||||||||| Sbjct: 31008165 ctagcaccaccaccgctcgt 31008146 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tgccctgccctgctgccgct 135 |||||||||||||||||||| Sbjct: 21826798 tgccctgccctgctgccgct 21826779
>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone BACR31D05, complete sequence Length = 172633 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 102751 cccgctggcgctgctgctgc 102770
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 17790470 gcgagggcgagggcgacggc 17790489
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 21552603 gcgagggcgagggcgacggc 21552622
>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone BACR27M04, complete sequence Length = 169689 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gggattgggatttgggattg 318 |||||||||||||||||||| Sbjct: 87980 gggattgggatttgggattg 87961
>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone BACR06D02, complete sequence Length = 172791 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gggattgggatttgggattg 318 |||||||||||||||||||| Sbjct: 156398 gggattgggatttgggattg 156379
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tgccctgccctgctgccgct 135 |||||||||||||||||||| Sbjct: 11399 tgccctgccctgctgccgct 11380
>gb|AC093915.2| Homo sapiens BAC clone RP11-785G17 from 2, complete sequence Length = 120416 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gctgctgctgcctgcatctc 113 |||||||||||||||||||| Sbjct: 16216 gctgctgctgcctgcatctc 16197
>gb|AC145899.4| Pan troglodytes BAC clone RP43-19O5 from chromosome 7, complete sequence Length = 176118 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cctgcatctctatgccctgc 123 |||||||||||||||||||| Sbjct: 37903 cctgcatctctatgccctgc 37922
>dbj|AK223321.1| Homo sapiens mRNA for hematological and neurological expressed 1 isoform 1 variant, clone: TMS07112 Length = 1447 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 112 gccgaggagcgaggtaggctggcgccgg 85
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcatagcaggcgccacgcga 195 |||||||||||||||||||| Sbjct: 4894068 gcatagcaggcgccacgcga 4894087
>dbj|AK120898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I02, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ctagcaccaccaccgctcgt 279 |||||||||||||||||||| Sbjct: 91 ctagcaccaccaccgctcgt 72
>dbj|AK119567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A06, full insert sequence Length = 2871 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttgggatttgggattgcgcg 322 |||||||||||||||||||| Sbjct: 99 ttgggatttgggattgcgcg 80
>dbj|AK060634.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B10, full insert sequence Length = 1380 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tgccctgccctgctgccgct 135 |||||||||||||||||||| Sbjct: 1106 tgccctgccctgctgccgct 1125
>gb|AF177862.1|AF177862 Homo sapiens HN1 protein mRNA, complete cds Length = 704 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 358 gccgaggagcgaggcaggcaggcgccgg 385 |||||||||||||| |||| |||||||| Sbjct: 100 gccgaggagcgaggtaggctggcgccgg 73
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 801586 gcgagggcgagggcgacggc 801605
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 73141 cccgctggcgctgctgctgc 73160
>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete sequence Length = 254438 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gggattgggatttgggattg 318 |||||||||||||||||||| Sbjct: 192254 gggattgggatttgggattg 192235
>emb|CR974422.14| Mouse DNA sequence from clone RP23-123G8 on chromosome 17, complete sequence Length = 189049 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctgctgctgcctgcatctct 114 |||||||||||||||||||| Sbjct: 126563 ctgctgctgcctgcatctct 126544
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagggcgagggcgacggc 211 |||||||||||||||||||| Sbjct: 17799723 gcgagggcgagggcgacggc 17799742
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete sequence Length = 223547 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 acggcatctctctatatagc 226 |||||||||||||||||||| Sbjct: 62008 acggcatctctctatatagc 61989
>gb|U65939.1|AVU65939 Azotobacter vinelandii GTPase (ftsA) gene, partial cds, and ATP binding protein (ftsZ) gene, complete cds Length = 1645 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 1325 cccgctggcgctgctgctgc 1344
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tgccctgccctgctgccgct 135 |||||||||||||||||||| Sbjct: 138415 tgccctgccctgctgccgct 138396
>gb|AF027865.1|MMMMH461 Mus musculus Major Histocompatibility Locus class II region Length = 138187 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctgctgctgcctgcatctct 114 |||||||||||||||||||| Sbjct: 94297 ctgctgctgcctgcatctct 94278
>emb|Z69638.1|HSL174G8A Human DNA sequence from clone LA04NC01-174G8 on chromosome 4, complete sequence Length = 27974 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 ccgaggagcgaggcaggcaggcgccggg 386 |||||| || |||||||||||||||||| Sbjct: 18472 ccgaggggccaggcaggcaggcgccggg 18499
>gb|DQ138817.1| Drosophila erecta voucher stock #14021-0224.0 CG7093 gene, partial cds Length = 2625 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2440 cccgctggcgctgctgctgc 2421
>gb|DQ138816.1| Drosophila yakuba strain T33 CG7093 gene, partial cds Length = 2640 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2476 cccgctggcgctgctgctgc 2457
>gb|DQ138815.1| Drosophila yakuba strain Tai18 CG7093 gene, partial cds Length = 2637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2473 cccgctggcgctgctgctgc 2454
>gb|DQ138814.1| Drosophila simulans strain Ky-b CG7093 gene, partial cds Length = 2595 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2434 cccgctggcgctgctgctgc 2415
>gb|DQ138813.1| Drosophila simulans strain Ky-a CG7093 gene, partial cds Length = 2592 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2431 cccgctggcgctgctgctgc 2412
>gb|DQ138812.1| Drosophila melanogaster strain Ral1 CG7093 gene, partial cds Length = 2598 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cccgctggcgctgctgctgc 104 |||||||||||||||||||| Sbjct: 2437 cccgctggcgctgctgctgc 2418
>dbj|AB045294.1| Homo sapiens DJ-1 gene, promoter and 5'UTR Length = 2119 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ccgcgcccccgctggcgctg 97 |||||||||||||||||||| Sbjct: 1130 ccgcgcccccgctggcgctg 1111 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,921,279 Number of Sequences: 3902068 Number of extensions: 3921279 Number of successful extensions: 79718 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79043 Number of HSP's gapped (non-prelim): 675 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
