ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39a05 |
|---|---|
| Clone Library Name | barley_pub |
>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1029 Score = 45.4 bits (106), Expect = 6e-05 Identities = 17/34 (50%), Positives = 26/34 (76%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + FL+G+SS+Y+E++ AW DP+SV SWD +F Sbjct: 49 EPFLNGSSSIYIEQMYEAWLQDPSSVHTSWDAYF 82
>ODO1_YEAST (P20967) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1014 Score = 44.7 bits (104), Expect = 1e-04 Identities = 16/35 (45%), Positives = 27/35 (77%) Frame = +3 Query: 324 TDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 TD+FL +++ Y++E+ +AW+ DP+SV SWD +F Sbjct: 41 TDNFLSTSNATYIDEMYQAWQKDPSSVHVSWDAYF 75
>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1027 Score = 42.7 bits (99), Expect = 4e-04 Identities = 18/43 (41%), Positives = 29/43 (67%) Frame = +3 Query: 300 RAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 ++V S + FL+G+SSVY+E++ W +P+SV SWD +F Sbjct: 41 QSVAASVKHEPFLNGSSSVYIEQMYETWLENPSSVHTSWDAYF 83
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + FL GTSS Y+EE+ AW +P SV +SWD FF Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFF 80
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + FL GTSS Y+EE+ AW +P SV +SWD FF Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFF 80
>ODO1_MOUSE (Q60597) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1019 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + FL GTSS Y+EE+ AW +P SV +SWD FF Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFF 80
>ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1002 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + FL GTSS Y+EE+ AW +P SV +SWD FF Sbjct: 47 EPFLSGTSSNYVEEMYCAWLENPKSVHKSWDIFF 80
>ODO1_BRUSU (Q8FYF7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 38.9 bits (89), Expect = 0.005 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +3 Query: 270 LPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + ++ AP+ RA + LT SFL G ++ Y+EEL +E DP SVD W +FF Sbjct: 1 MAKQEQAPD-RANDVFALT-SFLYGGNADYIEELYAKYEDDPNSVDPQWRDFF 51
>ODO1_BRUME (Q8YJE4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 38.9 bits (89), Expect = 0.005 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +3 Query: 270 LPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 + ++ AP+ RA + LT SFL G ++ Y+EEL +E DP SVD W +FF Sbjct: 1 MAKQEQAPD-RANDVFALT-SFLYGGNADYIEELYAKYEDDPNSVDPQWRDFF 51
>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 928 Score = 36.6 bits (83), Expect = 0.026 Identities = 14/32 (43%), Positives = 24/32 (75%) Frame = +3 Query: 333 FLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 +L G ++V++EEL + + A+P SVD++W FF Sbjct: 10 YLFGGNAVFVEELYKQYLANPASVDQTWQEFF 41
>ODO1_RICPR (Q9ZDY3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 936 Score = 35.4 bits (80), Expect = 0.058 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = +3 Query: 333 FLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 +L ++V++EEL R + A+P SVD++W FF Sbjct: 10 YLFSGNAVFVEELYRQYLANPNSVDQTWQEFF 41
>ODO1_HAEIN (P45303) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 935 Score = 34.7 bits (78), Expect = 0.098 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +3 Query: 321 LTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L + L G + Y+EEL ++ +DP SV+ESW F Sbjct: 11 LASTALGGANQSYIEELYESYLSDPQSVEESWRKTF 46
>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)| Length = 259 Score = 32.7 bits (73), Expect = 0.37 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +1 Query: 40 LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 141 LAAA W P G+L IG I +A RFG+ G Sbjct: 39 LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72
>ODO1_RALEU (Q59106) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 32.0 bits (71), Expect = 0.64 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +3 Query: 324 TDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 ++S+L G ++ Y+EEL A+ +P SV ++W +F Sbjct: 7 SNSYLFGGNAPYVEELYEAYLQNPASVPDNWRAYF 41
>TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)| Length = 1067 Score = 32.0 bits (71), Expect = 0.64 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = -3 Query: 307 TARGSGAAYRRGSVEWKYRGAGPANGLA---GARDRLLRS 197 TARGS A R G V W +GPA LA G R+RL R+ Sbjct: 300 TARGSAVAVR-GGVHWVTHRSGPARALAATPGVRNRLPRT 338
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 31.6 bits (70), Expect = 0.83 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -1 Query: 204 SAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKK 106 S + PG +P ++ FSD+ P+ D S+RG+K Sbjct: 308 SRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEK 340
>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 321 LTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L S+L G + ++E+L + DP SVD +W + F Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTF 45
>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 321 LTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L S+L G + ++E+L + DP SVD +W + F Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTF 45
>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 321 LTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L S+L G + ++E+L + DP SVD +W + F Sbjct: 10 LDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTF 45
>Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2| Length = 263 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 234 FAGPAPRYFHSTLPRRYAAPEPRAVP 311 + GP PR + PRRY+ P PR P Sbjct: 194 YPGPGPRGYPGQGPRRYSCPGPRGYP 219
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 1.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 180 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 91 P G PF+ R P PDA ++ G++ RP+ Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 30.4 bits (67), Expect = 1.9 Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -3 Query: 331 LSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRS-ATRAKPDAARN-SP 158 ++ R + T GS A + RG GP AGAR RS A AARN S Sbjct: 1188 ITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASA 1247 Query: 157 IFRSNSLSRRQ 125 RS SLSRR+ Sbjct: 1248 SPRSQSLSRRE 1258
>RHG09_HUMAN (Q9BRR9) Rho-GTPase-activating protein 9| Length = 750 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = -3 Query: 337 RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKP 179 R + RRE+ T R G+ R +E + G+GPA L+ D S +KP Sbjct: 439 RWVEARREAPTGRDQGSGDRENPLELRLSGSGPAE-LSAGEDEEEESELVSKP 490
>ODO1_AZOVI (P20707) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 943 Score = 30.4 bits (67), Expect = 1.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 336 LDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L G ++ Y+EEL + DP +V E W +F Sbjct: 15 LSGGNAAYVEELYELYLHDPNAVPEEWRTYF 45
>ODO1_BUCBP (Q89AJ7) Oxoglutarate dehydrogenase (EC 1.2.4.2)| Length = 916 Score = 29.6 bits (65), Expect = 3.2 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +3 Query: 315 SRLTDSFLDGTSSVYLEELQRAWEADPTSVDESW 416 + S++ +S Y++ L + DPTS+D SW Sbjct: 4 NEFNSSWMSSFNSSYIDNLYNKFLLDPTSIDNSW 37
>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 817 Score = 29.3 bits (64), Expect = 4.1 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 189 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRN 100 G NP +P T P + P PD +S RG R+ Sbjct: 13 GGNPLQPPTTPSPEPEPEPDGRSRRGGGRS 42
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Frame = -1 Query: 219 RATG---SSAAP--PGLNPTRPGTAPFSDRIPSPDA 127 RA G SSAAP PG P PG P S+ P P A Sbjct: 218 RAVGRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRA 253
>CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 344 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Frame = +2 Query: 107 FFPRLDLASGEGIR-SENGAV--PGRVGFSPGGAAEEPVARS 223 F RLD +SG ++ + +GA+ PG+V +PGGA V RS Sbjct: 198 FAARLDRSSGAKVQEASDGALLEPGKVYVAPGGATHLEVVRS 239
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -1 Query: 225 PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRP 94 PE A S+AA PG P P +AP P + SS RP Sbjct: 1417 PEDAATSAAAAPGEGPAAPSSAP-------PPSNSSSSSAPRRP 1453
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 189 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 85 G P++ AP + +PSP +S G RP+LR Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>ODO1_LEPIN (Q8F6S7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 336 LDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L G + LEEL ++ +P ++D+ W +FF Sbjct: 9 LYGENGALLEELYNQYKLNPETLDKEWKSFF 39
>ODO1_LEPIC (Q72PJ7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 28.9 bits (63), Expect = 5.4 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 336 LDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 L G + LEEL ++ +P ++D+ W +FF Sbjct: 9 LYGENGALLEELYNQYKLNPETLDKEWKSFF 39
>ATL1H_ARATH (Q9C7I1) Putative RING-H2 finger protein ATL1H precursor| Length = 327 Score = 28.9 bits (63), Expect = 5.4 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = -3 Query: 361 RYTLLVPS---RKLSVRRESGTARGSGAAYRRGSVEWKYRGAGPANGLA-GARDRL 206 R+TL +P R+LS + AR S YR GSV + RG G G+ DRL Sbjct: 267 RFTLQLPEEVRRQLSHMKTLPQARSSREGYRSGSVGSERRGKGKEKEFGEGSFDRL 322
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 28.9 bits (63), Expect = 5.4 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 19/111 (17%) Frame = -3 Query: 415 QDSSTEVGSASHARCSSSRYTLLVPS--RKLSVRRES----------GTARGSGAAYRRG 272 +D + +A RC + PS + R E+ G A G+G RRG Sbjct: 18 EDQALAAAAAEGGRCPDPALSAAAPSGGNGGAAREEAPCEAPPGPLPGRAGGTGRRRRRG 77 Query: 271 SVEWKYRGAGP-------ANGLAGARDRLLRSATRAKPDAARNSPIFRSNS 140 + + GA P AN L R RL R+ + A ++ +SP S++ Sbjct: 78 APQPAAGGAAPVPAAGGGANSLLLKRGRLKRNLSAAAAASSSSSPSSASSA 128
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +3 Query: 231 PFAGPAPRYFHSTLPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWE 386 P PAP HS+ +P P + PL R+T F+ G++ LQR E Sbjct: 278 PEGPPAPPKQHSS-----TSPFPTSTPLRRITKKFVKGSTEKNKLRLQRDQE 324
>ODO1_COXBU (P51056) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 327 DSFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 +S+L ++ Y+E L + DP SV+E W ++F Sbjct: 12 NSYLADNNAGYIETLYENFLKDPHSVNEEWRSYF 45
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 5.4 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 6/60 (10%) Frame = -2 Query: 191 PG*TRRGPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAG------STHDAAARGRG 30 PG RGP P P P AA + P GG PG G S D GRG Sbjct: 284 PGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRG 343
>ODO1_BUCAP (Q8K9N3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 923 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +3 Query: 330 SFLDGTSSVYLEELQRAWEADPTSVDESWDNFF 428 S+L G + Y+E++ ++ +P SVD +W + F Sbjct: 13 SWLSGNNQNYIEKIYESYLINPKSVDITWQDKF 45
>EXO84_YARLI (Q6C238) Exocyst complex component EXO84| Length = 657 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -2 Query: 167 EQPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 42 ++P+ Q L PN+ + RE V F R+PG G +DAAA Sbjct: 29 QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75
>CABP4_HUMAN (P57796) Calcium-binding protein 4 (CaBP4)| Length = 275 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = -1 Query: 213 TGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 91 TG A NP G P SP SSR R+RPD Sbjct: 62 TGPEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPD 102
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -1 Query: 180 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 85 P++ AP + +PSP +S G RP+LR Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = -1 Query: 225 PERATGSSAAPPGLNPTRPGTA---PFSDRIPSPDAKSSRG 112 P G+ AA PG TRPGT P + P A + RG Sbjct: 192 PAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRG 232
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 319 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 215 R + +RG GAA RG + RG G A G+ GAR Sbjct: 414 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 449
>ERF2_SCHPO (O74718) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 662 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 243 PAPRYFHSTLPRRYAAPEPRAVPLSRLTDSFLDGTSSVYLEELQRAWE-ADPTSVDE 410 PAP+ + + AAP P+ P ++ D+ L T S L++A E A+P +V E Sbjct: 161 PAPKVTSESTKKETAAPPPQETP-TKSADAELAKTPSAPAAALKKAAEAAEPATVTE 216
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 319 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 215 R + +RG GAA RG + RG G A G+ GAR Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 319 RESGTARGSGAAYRRGSVEWKYRGA-GPANGLAGAR 215 R + +RG GAA RG + RG G A G+ GAR Sbjct: 504 RGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGAR 539
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 28.1 bits (61), Expect = 9.2 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 Query: 204 SAAPPGLNPTRPGTAPFSDRIPSP 133 SA+ PG +P RPG+A S + SP Sbjct: 32 SASTPGPSPDRPGSATMSSPLSSP 55
>TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)| Length = 749 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 110 FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 226 FP +DL G E+ A GR+G+ P G + VA G Sbjct: 190 FPTVDLLYDYGKFFESCAADGRIGYFPEGVTKPKVAIIG 228
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = -3 Query: 310 GTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLS 134 G A G+G RRG+ + GA P G G + LL R K + + + S+S S Sbjct: 85 GRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAASSSSSS 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,357,720 Number of Sequences: 219361 Number of extensions: 1106721 Number of successful extensions: 5358 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5349 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
