ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 1e-19
2ref|NM_192888.1| Oryza sativa (japonica cultivar-group), predic... 92 5e-16
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
4dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
5emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on ch... 44 0.11
6gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 1.8
7dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 1.8
8gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 6.9
9gb|AY337919.1| Oryza sativa clone sk103 NBS-LRR-like gene, parti... 38 6.9
10gb|AY337918.1| Oryza sativa clone sk102 NBS-LRR-like gene, parti... 38 6.9
11gb|AY337917.1| Oryza sativa clone sk101 NBS-LRR-like gene, parti... 38 6.9
12gb|AY337916.1| Oryza sativa clone sk100 NBS-LRR-like gene, parti... 38 6.9
13gb|AY337913.1| Oryza sativa clone sk97 NBS-LRR-like gene, partia... 38 6.9
14gb|AY337911.1| Oryza sativa clone sk94 NBS-LRR-like gene, partia... 38 6.9
15gb|AY337909.1| Oryza sativa clone sk92 NBS-LRR-like gene, partia... 38 6.9
16gb|AY337907.1| Oryza sativa clone sk90 NBS-LRR-like gene, partia... 38 6.9
17gb|AY337905.1| Oryza sativa clone sk87 NBS-LRR-like gene, partia... 38 6.9
18gb|AY337904.1| Oryza sativa clone sk86 NBS-LRR-like gene, partia... 38 6.9
19gb|AY337903.1| Oryza sativa clone sk85 NBS-LRR-like gene, partia... 38 6.9
20gb|AY337902.1| Oryza sativa clone sk84 NBS-LRR-like gene, partia... 38 6.9
21gb|AY337899.1| Oryza sativa clone sk80 NBS-LRR-like gene, partia... 38 6.9
22gb|AY337897.1| Oryza sativa clone sk78 NBS-LRR-like gene, partia... 38 6.9
23gb|AY337896.1| Oryza sativa clone sk76 NBS-LRR-like gene, partia... 38 6.9
24gb|AY337895.1| Oryza sativa clone sk75 NBS-LRR-like gene, partia... 38 6.9
25gb|AY337893.1| Oryza sativa clone sk72 NBS-LRR-like gene, partia... 38 6.9
26gb|AY337891.1| Oryza sativa clone sk70 NBS-LRR-like gene, partia... 38 6.9
27gb|AY337890.1| Oryza sativa clone sk69 NBS-LRR-like gene, partia... 38 6.9
28gb|AY337889.1| Oryza sativa clone sk66 NBS-LRR-like gene, partia... 38 6.9
29gb|AY337888.1| Oryza sativa clone sk65 NBS-LRR-like gene, partia... 38 6.9
30gb|AY337887.1| Oryza sativa clone sk64 NBS-LRR-like gene, partia... 38 6.9
31gb|AY337886.1| Oryza sativa clone sk62 NBS-LRR-like gene, partia... 38 6.9
32gb|AY337885.1| Oryza sativa clone sk53 NBS-LRR-like gene, partia... 38 6.9
33gb|AY337884.1| Oryza sativa clone sk52 NBS-LRR-like gene, partia... 38 6.9
34gb|AY337883.1| Oryza sativa clone sk51 NBS-LRR-like gene, partia... 38 6.9
35gb|AY337881.1| Oryza sativa clone sk46 NBS-LRR-like gene, partia... 38 6.9
36gb|AY337872.1| Oryza sativa clone sk26 NBS-LRR-like gene, partia... 38 6.9
37gb|AY337866.1| Oryza sativa clone sk10 NBS-LRR-like gene, partia... 38 6.9
38gb|AY337865.1| Oryza sativa clone sk9 NBS-LRR-like gene, partial... 38 6.9
39emb|X63449.1|SCACTI6 S.coelicolor genes actIORF1, actIORF2, actI... 38 6.9
40gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 38 6.9
41gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 38 6.9
42emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment ... 38 6.9
43emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 38 6.9
44emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 38 6.9
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 6.9
46dbj|AK102800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.9
47gb|AF074887.1|AF074887 Oryza sativa clone RGA2 resitance gene an... 38 6.9
48gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 6.9
49gb|DQ275353.1| Glycine max threonine synthase gene, complete cds 38 6.9 
>dbj|AK066892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A19, full
           insert sequence
          Length = 2936

 Score =  103 bits (52), Expect = 1e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                       
Query: 66  tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 125
           |||||||||||||| ||||||||  || ||||||||||||||||||||||||| ||||||
Sbjct: 57  tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 116

                               
Query: 126 ggcaagagcgaggtgtcgga 145
           || |||||||||||| ||||
Sbjct: 117 gggaagagcgaggtggcgga 136
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>ref|NM_192888.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2541

 Score = 91.7 bits (46), Expect = 5e-16
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 72  atggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatccggcaag 131
           |||||||| ||||||||  || ||||||||||||||||||||||||| |||||||| |||
Sbjct: 1   atggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatccgggaag 60

                         
Query: 132 agcgaggtgtcgga 145
           ||||||||| ||||
Sbjct: 61  agcgaggtggcgga 74
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                            
Query: 66       tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 125
                |||||||||||||| ||||||||  || ||||||||||||||||||||||||| ||||||
Sbjct: 24990909 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 24990968

                  
Query: 126      gg 127
                ||
Sbjct: 24990969 gg 24990970
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>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0006C01
          Length = 153865

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 66    tccgccatggctcccacggcgccttcgccggcgaagtccgcctccccgtcccaaccatcc 125
             |||||||||||||| ||||||||  || ||||||||||||||||||||||||| ||||||
Sbjct: 63432 tccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatcc 63491

               
Query: 126   gg 127
             ||
Sbjct: 63492 gg 63493
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>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the
             gene for a novel protein (FLJ31208), three novel genes, a
             novel pseudogene and three CpG islands, complete sequence
          Length = 178850

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 12    ggacaaaaccaccacttgcagt 33
             ||||||||||||||||||||||
Sbjct: 79833 ggacaaaaccaccacttgcagt 79854
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     acggcgccttcgccggcgaa 100
              ||||||||||||||||||||
Sbjct: 600917 acggcgccttcgccggcgaa 600936
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     ccggcaagagcgaggtgtcg 143
               ||||||||||||||||||||
Sbjct: 7495757 ccggcaagagcgaggtgtcg 7495776
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 10      ccggacaaaaccaccactt 28
               |||||||||||||||||||
Sbjct: 5860449 ccggacaaaaccaccactt 5860467
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>gb|AY337919.1| Oryza sativa clone sk103 NBS-LRR-like gene, partial sequence
          Length = 324

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337918.1| Oryza sativa clone sk102 NBS-LRR-like gene, partial sequence
          Length = 324

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337917.1| Oryza sativa clone sk101 NBS-LRR-like gene, partial sequence
          Length = 556

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337916.1| Oryza sativa clone sk100 NBS-LRR-like gene, partial sequence
          Length = 555

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337913.1| Oryza sativa clone sk97 NBS-LRR-like gene, partial sequence
          Length = 562

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337911.1| Oryza sativa clone sk94 NBS-LRR-like gene, partial sequence
          Length = 554

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337909.1| Oryza sativa clone sk92 NBS-LRR-like gene, partial sequence
          Length = 322

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337907.1| Oryza sativa clone sk90 NBS-LRR-like gene, partial sequence
          Length = 324

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337905.1| Oryza sativa clone sk87 NBS-LRR-like gene, partial sequence
          Length = 329

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337904.1| Oryza sativa clone sk86 NBS-LRR-like gene, partial sequence
          Length = 558

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 46 ttgcagtcgtcttccccac 28
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>gb|AY337903.1| Oryza sativa clone sk85 NBS-LRR-like gene, partial sequence
          Length = 552

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337902.1| Oryza sativa clone sk84 NBS-LRR-like gene, partial sequence
          Length = 562

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337899.1| Oryza sativa clone sk80 NBS-LRR-like gene, partial sequence
          Length = 324

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337897.1| Oryza sativa clone sk78 NBS-LRR-like gene, partial sequence
          Length = 324

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337896.1| Oryza sativa clone sk76 NBS-LRR-like gene, partial sequence
          Length = 556

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337895.1| Oryza sativa clone sk75 NBS-LRR-like gene, partial sequence
          Length = 559

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337893.1| Oryza sativa clone sk72 NBS-LRR-like gene, partial sequence
          Length = 325

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337891.1| Oryza sativa clone sk70 NBS-LRR-like gene, partial sequence
          Length = 326

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337890.1| Oryza sativa clone sk69 NBS-LRR-like gene, partial sequence
          Length = 326

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337889.1| Oryza sativa clone sk66 NBS-LRR-like gene, partial sequence
          Length = 325

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337888.1| Oryza sativa clone sk65 NBS-LRR-like gene, partial sequence
          Length = 548

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337887.1| Oryza sativa clone sk64 NBS-LRR-like gene, partial sequence
          Length = 554

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337886.1| Oryza sativa clone sk62 NBS-LRR-like gene, partial sequence
          Length = 554

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337885.1| Oryza sativa clone sk53 NBS-LRR-like gene, partial sequence
          Length = 562

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337884.1| Oryza sativa clone sk52 NBS-LRR-like gene, partial sequence
          Length = 586

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337883.1| Oryza sativa clone sk51 NBS-LRR-like gene, partial sequence
          Length = 561

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337881.1| Oryza sativa clone sk46 NBS-LRR-like gene, partial sequence
          Length = 617

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 43 ttgcagtcgtcttccccac 25
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>gb|AY337872.1| Oryza sativa clone sk26 NBS-LRR-like gene, partial sequence
          Length = 613

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 97 ttgcagtcgtcttccccac 79
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>gb|AY337866.1| Oryza sativa clone sk10 NBS-LRR-like gene, partial sequence
          Length = 561

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 45 ttgcagtcgtcttccccac 27
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>gb|AY337865.1| Oryza sativa clone sk9 NBS-LRR-like gene, partial sequence
          Length = 565

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 46 ttgcagtcgtcttccccac 28
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>emb|X63449.1|SCACTI6 S.coelicolor genes actIORF1, actIORF2, actIORF3, actVII, actIV and
            actVB for beta-ketoacyl synthase/acyl transferase, acyl
            carrier protein, cyclase/dehydrase, dehydrase and
            dimerase
          Length = 5286

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   cccacgcgcgcccagatcc 59
            |||||||||||||||||||
Sbjct: 3064 cccacgcgcgcccagatcc 3046
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     agtgcccaccggacaaaac 20
             |||||||||||||||||||
Sbjct: 45467 agtgcccaccggacaaaac 45449
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     agtgcccaccggacaaaac 20
             |||||||||||||||||||
Sbjct: 26983 agtgcccaccggacaaaac 27001
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>emb|BX294154.1| Pirellula sp. strain 1 complete genome; segment 22/24
          Length = 299050

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 118    aaccatccggcaagagcga 136
              |||||||||||||||||||
Sbjct: 232384 aaccatccggcaagagcga 232402
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     cccacgcgcgcccagatcc 59
              |||||||||||||||||||
Sbjct: 162887 cccacgcgcgcccagatcc 162869
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 124   ccggcaagagcgaggtgtc 142
             |||||||||||||||||||
Sbjct: 29959 ccggcaagagcgaggtgtc 29941
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      cgccttcgccggcgaagtc 103
               |||||||||||||||||||
Sbjct: 2846550 cgccttcgccggcgaagtc 2846532



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      cgccttcgccggcgaagtc 103
               |||||||||||||||||||
Sbjct: 2846274 cgccttcgccggcgaagtc 2846256



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      cgccttcgccggcgaagtc 103
               |||||||||||||||||||
Sbjct: 2845998 cgccttcgccggcgaagtc 2845980
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>dbj|AK102800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108E06,
          full insert sequence
          Length = 2017

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 76 ctcccacggcgccttcgccggcg 98
          ||||||| |||||||||||||||
Sbjct: 57 ctcccactgcgccttcgccggcg 79
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>gb|AF074887.1|AF074887 Oryza sativa clone RGA2 resitance gene analog sequence
          Length = 524

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 27 ttgcagtcgtcttccccac 45
          |||||||||||||||||||
Sbjct: 25 ttgcagtcgtcttccccac 7
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 86      gccttcgccggcgaagtcc 104
               |||||||||||||||||||
Sbjct: 2100921 gccttcgccggcgaagtcc 2100939
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>gb|DQ275353.1| Glycine max threonine synthase gene, complete cds
          Length = 3166

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   gtcgtcttccccacgcgcg 50
            |||||||||||||||||||
Sbjct: 1007 gtcgtcttccccacgcgcg 989


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 720,951
Number of Sequences: 3902068
Number of extensions: 720951
Number of successful extensions: 51589
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51122
Number of HSP's gapped (non-prelim): 467
length of query: 145
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 124
effective length of database: 17,151,101,840
effective search space: 2126736628160
effective search space used: 2126736628160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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