Clone Name | bastl38h10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_468328.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3093 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 230 cgccgccgcgggcaaggagaactcggcgtcgaagctctccaagcc 274 |||||| || || ||||||||||||||||| |||| ||||||||| Sbjct: 114 cgccgctgccgggaaggagaactcggcgtccaagccctccaagcc 158
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Minus Query: 230 cgccgccgcgggcaaggagaactcggcgtcgaagctctccaagcc 274 |||||| || || ||||||||||||||||| |||| ||||||||| Sbjct: 34637103 cgccgctgccgggaaggagaactcggcgtccaagccctccaagcc 34637059 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 catggccgcccgcctcaaggaccgcggc 114 ||||||| ||||| |||||||||||||| Sbjct: 34637217 catggcctcccgcatcaaggaccgcggc 34637190 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcag 131 |||||||||||||| ||||||||| Sbjct: 8410900 ccgcggcggcggcggcggcagcag 8410923
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Minus Query: 230 cgccgccgcgggcaaggagaactcggcgtcgaagctctccaagcc 274 |||||| || || ||||||||||||||||| |||| ||||||||| Sbjct: 103718 cgccgctgccgggaaggagaactcggcgtccaagccctccaagcc 103674 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 catggccgcccgcctcaaggaccgcggc 114 ||||||| ||||| |||||||||||||| Sbjct: 103832 catggcctcccgcatcaaggaccgcggc 103805
>ref|NM_005994.3| Homo sapiens T-box 2 (TBX2), mRNA Length = 3396 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 466 ccgcggcggcggcggcggcagcagcggc 493
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 130646 ccgcggcggcggcggcggcagcagcggc 130673
>gb|BC052566.1| Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 IMAGE:6339405), complete cds Length = 3059 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 466 ccgcggcggcggcggcggcagcagcggc 493
>gb|BC070054.1| Homo sapiens T-box 2, mRNA (cDNA clone IMAGE:30347457) Length = 3360 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 453 ccgcggcggcggcggcggcagcagcggc 480
>emb|AL832900.1|HSM804211 Homo sapiens mRNA; cDNA DKFZp762H2012 (from clone DKFZp762H2012) Length = 2590 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 6 ccgcggcggcggcggcggcagcagcggc 33
>gb|U28049.1|HSU28049 Human TBX2 (TXB2) mRNA, complete cds Length = 2279 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 202 ccgcggcggcggcggcggcagcagcggc 229
>gb|AC008209.5|AC008209 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR06K17, complete sequence Length = 169902 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgt 137 |||||||||||| ||||||||||||||| Sbjct: 129866 gcggcggcggcggcggcagcagcggcgt 129839
>ref|XM_575481.1| PREDICTED: Rattus norvegicus similar to transcription factor HOXA13 (LOC500129), mRNA Length = 2441 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 420 ccgcggcggcggcggcggcagcagcggc 393
>emb|AJ339418.1|HSA339418 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AA23C Length = 626 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 5 ccgcggcggcggcggcggcagcagcggc 32
>emb|AJ339370.1|HSA339370 Homo sapiens genomic sequence surrounding NotI site, clone NL4-AN6C Length = 564 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 5 ccgcggcggcggcggcggcagcagcggc 32
>emb|AJ334959.1|HSA334959 Homo sapiens genomic sequence surrounding NotI site, clone NB1-087C Length = 810 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 5 ccgcggcggcggcggcggcagcagcggc 32
>emb|AJ341965.1|HSA341965 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CB9R Length = 729 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 5 ccgcggcggcggcggcggcagcagcggc 32
>gb|AE003753.3| Drosophila melanogaster chromosome 3R, section 91 of 118 of the complete sequence Length = 226793 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgt 137 |||||||||||| ||||||||||||||| Sbjct: 195651 gcggcggcggcggcggcagcagcggcgt 195624
>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence Length = 189356 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 14571 ccgcggcggcggcggcggcagcagcggc 14544
>emb|AJ342204.1|HSA342204 Homo sapiens genomic sequence surrounding NotI site, clone NL4-DA20C Length = 685 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||||||||| Sbjct: 5 ccgcggcggcggcggcggcagcagcggc 32
>ref|XM_517122.1| PREDICTED: Pan troglodytes similar to transcription factor MLR1 (LOC461135), mRNA Length = 8214 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 62 gcggcggcggcggcggcagcagcggcg 36
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 9262 gcggcggcggcggcggcagcagcggcg 9236
>ref|NM_024496.2| Homo sapiens chromosome 14 open reading frame 4 (C14orf4), mRNA Length = 4166 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 1161 gcggcggcggcggcggcagcagcggcg 1187
>gb|BC065068.1| Mus musculus potassium large conductance calcium-activated channel, subfamily M, alpha member 1, mRNA (cDNA clone IMAGE:6418026), containing frame-shift errors Length = 4445 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 94 gcggcggcggcggcggcagcagcggcg 120
>ref|XM_849884.1| PREDICTED: Canis familiaris similar to Ferritin light chain 1 (Ferritin L subunit 1) (LOC612154), mRNA Length = 2172 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgtgaaggcg 144 |||||||||||| |||| ||||||||| ||||||| Sbjct: 1840 gcggcggcggcggcggcggcagcggcgggaaggcg 1806
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 134866 gcggcggcggcggcggcagcagcggcg 134840 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 134836 gcggcggcggcggcggcagcagcggcg 134810 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 103382 gcggcggcggcggcggcagcagcggcg 103408 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 103352 gcggcggcggcggcggcagcagcggcg 103378
>emb|AJ277365.1|HSA277365 Homo sapiens polyglutamine-containing C14ORF4 gene Length = 4959 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 1269 gcggcggcggcggcggcagcagcggcg 1295
>ref|XM_539462.2| PREDICTED: Canis familiaris similar to Sp4 transcription factor, transcript variant 1 (LOC482345), mRNA Length = 3021 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 231 gcggcggcggcggcggcagcagcggcg 257
>ref|XM_857849.1| PREDICTED: Canis familiaris similar to Sp4 transcription factor, transcript variant 3 (LOC482345), mRNA Length = 2973 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 231 gcggcggcggcggcggcagcagcggcg 257
>gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, complete sequence Length = 201670 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 31023 gcggcggcggcggcggcagcagcggcg 30997
>emb|AL731556.11| Human DNA sequence from clone RP11-428P16 on chromosome 10 Contains the 5' end of the KCNMA1 gene for potassium large conductance calcium-activated channel subfamily M alpha member 1, a novel zinc finger pseudogene (KIAA1629) and two CpG islands, complete sequence Length = 203003 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 79324 gcggcggcggcggcggcagcagcggcg 79298
>emb|AL358780.22| Human DNA sequence from clone RP11-418C1 on chromosome 10 Contains two novel genes (FLJ31094), the gene for a novel protein, the 5' end of the MLLT10 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to 10 (AF10), a noel gene (DKFZP761J229) and six CpG islands, complete sequence Length = 112311 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 48606 gcggcggcggcggcggcagcagcggcg 48632
>emb|X61754.1|MMHSF2 M.musculus mRNA for heat shock transcripton factor 2 Length = 1972 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 97 gcggcggcggcggcggcagcagcggcg 71
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.061 Identities = 29/31 (93%) Strand = Plus / Minus Query: 106 gaccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||||| || |||||| Sbjct: 7621 gaccgcggcggcggcgccggcggccgcggcg 7591
>gb|BC037322.1| Homo sapiens transcription factor MLR1, mRNA (cDNA clone MGC:43101 IMAGE:5260413), complete cds Length = 3479 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 69 gcggcggcggcggcggcagcagcggcg 43
>gb|BC062659.1| Homo sapiens potassium large conductance calcium-activated channel, subfamily M, alpha member 1, mRNA (cDNA clone IMAGE:4277048), complete cds Length = 891 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 186 gcggcggcggcggcggcagcagcggcg 212
>gb|BC024965.1| Homo sapiens potassium large conductance calcium-activated channel, subfamily M, alpha member 1, mRNA (cDNA clone IMAGE:4447157), with apparent retained intron Length = 882 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 191 gcggcggcggcggcggcagcagcggcg 217
>gb|BC009695.1| Homo sapiens potassium large conductance calcium-activated channel, subfamily M, alpha member 1, mRNA (cDNA clone IMAGE:3900695), with apparent retained intron Length = 918 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 161 gcggcggcggcggcggcagcagcggcg 187
>emb|CR627384.1| Homo sapiens mRNA; cDNA DKFZp781N1049 (from clone DKFZp781N1049) Length = 1277 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 97 gcggcggcggcggcggcagcagcggcg 123
>dbj|AK096181.1| Homo sapiens cDNA FLJ38862 fis, clone MESAN2012113 Length = 3441 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 47 gcggcggcggcggcggcagcagcggcg 21
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 209625 gcggcggcggcggcggcagcagcggcg 209651
>gb|AC093275.3| Homo sapiens chromosome 5 clone RP11-379A13, complete sequence Length = 170823 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 76884 gcggcggcggcggcggcagcagcggcg 76910
>dbj|AK142894.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930039O12 product:potassium large conductance calcium-activated channel, subfamily M, alpha member 1, full insert sequence Length = 2342 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 38 gcggcggcggcggcggcagcagcggcg 64
>ref|NM_002247.2| Homo sapiens potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), transcript variant 2, mRNA Length = 6103 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 191 gcggcggcggcggcggcagcagcggcg 217
>ref|NM_001014797.1| Homo sapiens potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), transcript variant 1, mRNA Length = 11993 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 191 gcggcggcggcggcggcagcagcggcg 217
>gb|AC079399.5| Homo sapiens BAC clone RP11-414P19 from 4, complete sequence Length = 169035 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 135976 gcggcggcggcggcggcagcagcggcg 136002
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 131551 gcggcggcggcggcggcagcagcggcg 131525
>dbj|AK053976.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230008I10 product:heat shock factor 2, full insert sequence Length = 2696 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 64 gcggcggcggcggcggcagcagcggcg 38
>gb|AF321818.1|AF321818 Oryctolagus cuniculus large conductance calcium-activated potassium channel alpha subunit (KCNMA1) mRNA, complete cds Length = 3962 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 183 gcggcggcggcggcggcagcagcggcg 209
>ref|NM_153686.4| Homo sapiens transcription factor MLR1 (MLR1), mRNA Length = 3479 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 69 gcggcggcggcggcggcagcagcggcg 43
>ref|XM_224521.3| PREDICTED: Rattus norvegicus SRY-box containing gene 21 (predicted) (Sox21_predicted), mRNA Length = 3213 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 3041 gcggcggcggcggcggcagcagcggcg 3015
>gb|DQ119605.1| Anniella pulchra HOXA13 (HOXA13) gene, partial cds Length = 436 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 109 cgcggcggcggcgccggcagcagcggc 135 ||||||||||||| ||||||||||||| Sbjct: 40 cgcggcggcggcggcggcagcagcggc 66
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 40613 gcggcggcggcggcggcagcagcggcg 40639
>gb|AC007686.5|AC007686 Homo sapiens chromosome 14 clones CTD-2289B16, RP11-116N21, RP11-7F17, complete sequence Length = 181386 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 89955 gcggcggcggcggcggcagcagcggcg 89929
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 13284 gcggcggcggcggcggcagcagcggcg 13310
>emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chromosome 14, complete sequence Length = 78271 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 70813 gcggcggcggcggcggcagcagcggcg 70839
>gb|AF045615.1|MM2HSF02 Mus musculus heat shock factor 2 (Hsf2) gene, exon 1 Length = 242 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 88 gcggcggcggcggcggcagcagcggcg 62
>gb|AF105372.1|AF105372 Homo sapiens large-conductance calcium-activated potassium channel alpha subunit gene, partial cds Length = 2022 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 1838 gcggcggcggcggcggcagcagcggcg 1864
>emb|CT025624.11| Mouse DNA sequence from clone RP24-212N20 on chromosome 14, complete sequence Length = 198113 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 66307 gcggcggcggcggcggcagcagcggcg 66333
>gb|BC108292.1| Homo sapiens cDNA clone IMAGE:30338685 Length = 4203 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 1169 gcggcggcggcggcggcagcagcggcg 1195
>gb|U23767.1|HSU23767 Human calcium-activated potassium channel (hSlo) mRNA, complete cds Length = 3537 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 14 gcggcggcggcggcggcagcagcggcg 40
>gb|U13913.1|HSU13913 Human large-conductance calcium-activated potassium channel (hSlo) mRNA, complete cds Length = 4149 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 92 gcggcggcggcggcggcagcagcggcg 118
>gb|U09383.1|MMU09383 Mus musculus calcium-activated potassium channel mRNA, complete cds Length = 5001 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 759 gcggcggcggcggcggcagcagcggcg 785
>emb|AJ001217.1|HSCGG10P5 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate P5-5 (Chr.10) Length = 5365 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 3560 gcggcggcggcggcggcagcagcggcg 3534
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 7679 gcggcggcggcggcggcagcagcggcg 7653 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcg 136 |||||||||||| |||||||||||||| Sbjct: 7649 gcggcggcggcggcggcagcagcggcg 7623
>gb|BC051905.1| Homo sapiens zinc finger protein 281, mRNA (cDNA clone MGC:60368 IMAGE:6165292), complete cds Length = 3047 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 102 gcggcggcggcggcggcagcagcggc 127
>gb|DQ213421.1| Taeniopygia guttata clone 0065P0014H03 MGC46341-like mRNA, complete sequence Length = 1135 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 66 gcggcggcggcggcggcagcagcggc 91
>ref|NM_197100.1| Oryza sativa (japonica cultivar-group) putative c-myc binding protein (OSJNBb0049A16.4), mRNA Length = 718 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 24 cggcggcggcggcggcagcagcggcg 49
>ref|XM_517830.1| PREDICTED: Pan troglodytes similar to golgi phosphoprotein 3; golgi peripheral membrane protein 1, 34 kDa; golgi protein; coat-protein; golgi-associated protein (LOC461946), mRNA Length = 1026 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 148 ggcggcggcgccggcagcagcg 169
>gb|BC027756.1| Mus musculus Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae), mRNA (cDNA clone MGC:29274 IMAGE:5067496), complete cds Length = 2545 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcg 133 |||||||||||||| ||||||||||| Sbjct: 124 ccgcggcggcggcggcggcagcagcg 149
>gb|BC031127.1| Mus musculus Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae), mRNA (cDNA clone MGC:36559 IMAGE:4972826), complete cds Length = 2692 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcg 133 |||||||||||||| ||||||||||| Sbjct: 23 ccgcggcggcggcggcggcagcagcg 48
>gb|AY731528.1| Arachis hypogaea clone PM708 microsatellite sequence Length = 404 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 187 gcggcggcggcggcggcagcagcggc 212
>gb|BC012123.1| Homo sapiens golgi phosphoprotein 3 (coat-protein), mRNA (cDNA clone MGC:20187 IMAGE:4558305), complete cds Length = 2655 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 328 ggcggcggcgccggcagcagcg 349
>gb|BC063586.1| Homo sapiens golgi phosphoprotein 3 (coat-protein), mRNA (cDNA clone MGC:74684 IMAGE:4428707), complete cds Length = 2654 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 297 ggcggcggcgccggcagcagcg 318
>gb|BC033725.1| Homo sapiens golgi phosphoprotein 3 (coat-protein), mRNA (cDNA clone MGC:44986 IMAGE:4999629), complete cds Length = 2694 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 365 ggcggcggcgccggcagcagcg 386
>ref|NM_012482.3| Homo sapiens zinc finger protein 281 (ZNF281), mRNA Length = 3535 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 193 gcggcggcggcggcggcagcagcggc 218
>ref|NM_022130.3| Homo sapiens golgi phosphoprotein 3 (coat-protein) (GOLPH3), mRNA Length = 2676 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 373 ggcggcggcgccggcagcagcg 394
>gb|AC107733.14| Mus musculus chromosome 5, clone RP23-410E2, complete sequence Length = 200403 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 117434 gcggcggcggcggcggcagcagcggc 117409
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 cggcagcagcggcgtgaaggcg 144 |||||||||||||||||||||| Sbjct: 882514 cggcagcagcggcgtgaaggcg 882493
>gb|AC132576.3| Mus musculus BAC clone RP24-444F2 from chromosome 16, complete sequence Length = 135862 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 99238 gcggcggcggcggcggcagcagcggc 99213
>gb|AF029308.1|HTCRBCHR9 Homo sapiens chromosome 9 duplication of the T cell receptor beta locus and trypsinogen gene families Length = 216293 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgt 137 |||||| ||||||||||||||| ||||||| Sbjct: 70928 ccgcgggggcggcgccggcagcggcggcgt 70899
>emb|AL356489.14| Human DNA sequence from clone RP11-384P7 on chromosome 9 Contains the TRBV25OR9-2 gene for T cell receptor beta variable 25/OR9-2, the PTENP1 gene for phosphatase and tensin homolog (mutated in multiple advanced cancers 1) pseudogene 1 (PTH2, PTEN2, PSIPTEN), a T-cell receptor beta chain V region protein pseudogene, two novel genes, the 5' end of the PRSS3 gene for serine protease 3 (mesotrypsin) and two CpG islands, complete sequence Length = 130639 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgt 137 |||||| ||||||||||||||| ||||||| Sbjct: 22280 ccgcgggggcggcgccggcagcggcggcgt 22251
>emb|Y11321.1|RNTTF2PRT R.norvegicus mRNA for fork head protein TTF-2 Length = 2807 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 1113 gcggcggcggcggcggcagcagcggc 1088
>gb|BC060820.1| Homo sapiens zinc finger protein 281, mRNA (cDNA clone MGC:71675 IMAGE:30344180), complete cds Length = 3535 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 193 gcggcggcggcggcggcagcagcggc 218
>emb|AJ132592.1|HSA132592 Homo sapiens mRNA for zinc finger protein, 3115 BP Length = 3115 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 193 gcggcggcggcggcggcagcagcggc 218
>emb|AJ001641.1|RNBRAIN1 Rattus norvegicus mRNA for Brain-1 (Brn-1) protein Length = 3050 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 1712 gcggcggcggcggcggcagcagcggc 1687
>gb|AC151616.2| Emiliania huxleyi clone JGIACCU-13M1, complete sequence Length = 36906 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 14454 cggcggcggcggcggcagcagcggcg 14429
>ref|NG_001337.1| Homo sapiens T cell receptor beta variable orphans on chromosome 9 (TRBVOR9@) on chromosome 9 Length = 194564 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgt 137 |||||| ||||||||||||||| ||||||| Sbjct: 70880 ccgcgggggcggcgccggcagcggcggcgt 70851
>dbj|AB244281.1| Oryza sativa (japonica cultivar-group) OML6 mRNA for MEI2-like RNA binding protein, complete cds Length = 972 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcgtgaag 141 |||||||||||||| |||| |||||| ||||||| Sbjct: 609 ccgcggcggcggcggcggccgcagcgtcgtgaag 642
>ref|NM_031828.1| Rattus norvegicus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (Kcnma1), mRNA Length = 5453 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 509 gcggcggcggcggcggcagcagcggc 534
>dbj|AK094701.1| Homo sapiens cDNA FLJ37382 fis, clone BRAMY2026091, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 2932 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 152 gcggcggcggcggcggcagcagcggc 177
>dbj|AK075156.1| Homo sapiens cDNA FLJ90675 fis, clone PLACE1005669 Length = 2676 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 373 ggcggcggcgccggcagcagcg 394
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||||| |||||||||||| Sbjct: 9389 cggcggcggcgccagcagcagcggcg 9364
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||||| |||||||||||| Sbjct: 156904 cggcggcggcgccagcagcagcggcg 156879 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcggcggcgccggcagcagcggcg 136 ||||||||| |||||||||||||| Sbjct: 84862 gcggcggcggcggcagcagcggcg 84885
>dbj|AK055939.1| Homo sapiens cDNA FLJ31377 fis, clone NESOP1000087 Length = 1881 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 557 ggcggcggcgccggcagcagcg 536
>dbj|AK027284.1| Homo sapiens cDNA FLJ14378 fis, clone HEMBA1001804, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 1738 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 211 gcggcggcggcggcggcagcagcggc 236
>emb|CR593710.1| full-length cDNA clone CS0DC006YH07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 873 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgt 137 |||||| ||||||||||||||| ||||||| Sbjct: 73 ccgcgggggcggcgccggcagcggcggcgt 44
>dbj|AK022916.1| Homo sapiens cDNA FLJ12854 fis, clone NT2RP2003480, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 3046 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 144 gcggcggcggcggcggcagcagcggc 169
>gb|AC025178.8| Homo sapiens chromosome 5 clone CTD-2152M20, complete sequence Length = 134995 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 5254 ggcggcggcgccggcagcagcg 5275
>gb|AC022444.7| Homo sapiens chromosome 5 clone RP11-422J14, complete sequence Length = 45141 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 29446 ggcggcggcgccggcagcagcg 29467
>gb|AC104461.2| Homo sapiens chromosome 1 clone RP11-469A15, complete sequence Length = 165496 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 96435 gcggcggcggcggcggcagcagcggc 96410
>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete sequence Length = 129585 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 101108 cggcggcggcggcggcagcagcggcg 101083
>gb|AC152165.2| Mus musculus BAC clone RP24-159A20 from chromosome 5, complete sequence Length = 194519 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 38758 gcggcggcggcggcggcagcagcggc 38783
>dbj|AK080861.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330003C09 product:C1ORF28 homolog [Homo sapiens], full insert sequence Length = 2534 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcg 133 |||||||||||||| ||||||||||| Sbjct: 155 ccgcggcggcggcggcggcagcagcg 180
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 17959925 cggcggcggcggcggcagcagcggcg 17959950
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgtgaag 141 |||||||||||||| |||| |||||| ||||||| Sbjct: 20510995 ccgcggcggcggcggcggccgcagcgtcgtgaag 20510962 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 16384829 ccgcggcggcggcggcggcggcagcggcg 16384801
>dbj|AB104439.1| Mus musculus DNA, clone:pINS_hur170, insertion mutant Length = 2747 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 29 gcggcggcggcggcggcagcagcggc 4
>ref|NM_138909.1| Rattus norvegicus forkhead box E1 (thyroid transcription factor 2) (Foxe1), mRNA Length = 2807 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 1113 gcggcggcggcggcggcagcagcggc 1088
>ref|NM_138837.1| Rattus norvegicus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA Length = 3050 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 1712 gcggcggcggcggcggcagcagcggc 1687
>ref|NM_145991.1| Mus musculus Vcell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Cdc73), mRNA Length = 2692 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcg 133 |||||||||||||| ||||||||||| Sbjct: 23 ccgcggcggcggcggcggcagcagcg 48
>ref|XM_344284.2| PREDICTED: Rattus norvegicus similar to KCNMA1 protein (LOC498438), mRNA Length = 1441 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 189 gcggcggcggcggcggcagcagcggc 214
>gb|AC025181.8| Homo sapiens chromosome 5 clone CTD-2186M15, complete sequence Length = 96399 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 9739 ggcggcggcgccggcagcagcg 9718
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcgtgaag 141 |||||||||||||| |||| |||||| ||||||| Sbjct: 28642 ccgcggcggcggcggcggccgcagcgtcgtgaag 28609
>gb|AF135265.1|AF135265 Rattus norvegicus large-conductance calcium-activated potassium channel (slo) mRNA, complete cds Length = 4266 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 363 gcggcggcggcggcggcagcagcggc 388
>emb|AJ296152.1|HSA296152 Homo sapiens mRNA for Golgi protein (GPP34 gene) Length = 2524 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcg 133 |||||||||||||||||||||| Sbjct: 194 ggcggcggcgccggcagcagcg 215
>emb|Z58277.1|HS34A12F H.sapiens CpG island DNA genomic Mse1 fragment, clone 34a12, forward read cpg34a12.ft1a Length = 248 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 185 cggcggcggcggcggcagcagcggcg 160
>gb|AF125158.1|AF125158 Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA, complete cds Length = 3029 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 109 gcggcggcggcggcggcagcagcggc 134
>dbj|AK064107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E10, full insert sequence Length = 1488 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcgtgaag 141 |||||||||||||| |||| |||||| ||||||| Sbjct: 657 ccgcggcggcggcggcggccgcagcgtcgtgaag 690
>dbj|AK064048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D11, full insert sequence Length = 919 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 65 cggcggcggcggcggcagcagcggcg 90
>gb|AY344965.2| Rattus norvegicus large-conductance calcium-activated potassium ion channel truncated isoform S0-S6 (Kcnma1) mRNA, complete cds, alternatively spliced Length = 4064 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 341 gcggcggcggcggcggcagcagcggc 366
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcg 136 ||||||||||| |||||||||||||| Sbjct: 17969178 cggcggcggcggcggcagcagcggcg 17969203
>gb|U40603.1|RNU40603 Rattus norvegicus rat-slowpoke-alpha mRNA, complete cds Length = 5453 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggc 135 |||||||||||| ||||||||||||| Sbjct: 509 gcggcggcggcggcggcagcagcggc 534
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete sequence Length = 165527 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcg 133 |||||||||||||| ||||||||||| Sbjct: 11458 ccgcggcggcggcggcggcagcagcg 11433
>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027 biosynthetic gene cluster, complete sequence Length = 85163 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 aggaccgcggcggcggcgccgg 125 |||||||||||||||||||||| Sbjct: 57560 aggaccgcggcggcggcgccgg 57539
>gb|BC108281.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone MGC:111427 IMAGE:3869494), complete cds Length = 2837 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 53 ggcggcggcggcggcagcagcggcg 29
>ref|NM_001035305.1| Bos taurus similar to RPB5-mediating protein isoform a (MGC128688), mRNA Length = 2583 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 75 ccgcggcggcggcggcggctgcagcggcg 103
>ref|NM_032246.3| Homo sapiens ring finger and KH domain containing 3 (RKHD3), mRNA Length = 3398 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 359 gcggcggcggcggcggcagcagcgg 383
>ref|XM_525278.1| PREDICTED: Pan troglodytes similar to thyroid transcription factor-1 (LOC469893), mRNA Length = 1488 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 428 ccgcggcggcggcggcggcagctgcggcg 456
>ref|XM_480882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 264 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 76 ccgcggcggcggcgccggccgccgcggcg 48
>ref|XM_480883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 982 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 91 ccgcggcggcggcgccggccgccgcggcg 63
>ref|NM_185093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 434 ccgcggcggcggcggcggcggcagcggcg 406
>gb|DQ214000.1| Taeniopygia guttata clone 0064P0015B05 transcription factor IIIA variant 1-like mRNA, complete sequence Length = 653 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 59 gcggcggcggcggcggcagcagcgg 83
>ref|NM_001009745.1| Ovis aries activator protein 2 (AP2), mRNA Length = 3532 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 2642 cggcggcggcggcggcagcagcggc 2618
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 cgcggcggcggcgccggcagcagcg 133 ||||||||||||| ||||||||||| Sbjct: 497073 cgcggcggcggcgacggcagcagcg 497049
>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0061D06, complete sequence Length = 172126 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 93387 ccgcggcggcggcgccggccgccgcggcg 93415
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 cggcagcagcggcgtgaaggc 143 ||||||||||||||||||||| Sbjct: 940433 cggcagcagcggcgtgaaggc 940413
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 79855 ggcggcggcggcggcagcagcggcg 79831
>ref|NM_145690.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (YWHAZ), transcript variant 2, mRNA Length = 2876 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 64 ggcggcggcggcggcagcagcggcg 40
>ref|XM_324150.1| Neurospora crassa OR74A predicted protein (NCU04794.1) partial mRNA Length = 1113 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 810 ggcggcggcggcggcagcagcggcg 834
>ref|XM_955327.1| Neurospora crassa OR74A hypothetical protein (NCU04794.1) partial mRNA Length = 1113 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 810 ggcggcggcggcggcagcagcggcg 834
>gb|AC139023.14| Mus musculus chromosome 1, clone RP23-430G15, complete sequence Length = 207067 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcgtg 138 |||||||||||| |||| ||||||||||| Sbjct: 73634 gcggcggcggcggcggccgcagcggcgtg 73662
>gb|BC072413.1| Homo sapiens eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:6165611), partial cds Length = 5764 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 165 gcggcggcggcggcggcagcagcgg 189
>gb|BC111584.1| Homo sapiens SRY (sex determining region Y)-box 21, mRNA (cDNA clone MGC:133419 IMAGE:40080556), complete cds, with stop codon, in Gateway system Length = 885 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 529 ccgcggcggcggcggcggcggcagcggcg 501
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 cggcagcagcggcgtgaaggc 143 ||||||||||||||||||||| Sbjct: 1983143 cggcagcagcggcgtgaaggc 1983123
>gb|AC090033.2| Felis catus clone RP86-523H23, complete sequence Length = 125267 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 accgcggcggcggcgccggcagcagcggc 135 ||||||||||||||| |||| |||||||| Sbjct: 20554 accgcggcggcggcggcggcggcagcggc 20526
>gb|AC087731.2| Felis catus clone RP86-459O8, complete sequence Length = 125661 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 accgcggcggcggcgccggcagcagcggc 135 ||||||||||||||| |||| |||||||| Sbjct: 114871 accgcggcggcggcggcggcggcagcggc 114843
>ref|NM_007084.2| Homo sapiens SRY (sex determining region Y)-box 21 (SOX21), mRNA Length = 2537 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 585 ccgcggcggcggcggcggcggcagcggcg 557
>gb|AC104542.10| Mus musculus chromosome 1, clone RP23-165D11, complete sequence Length = 211537 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcgtg 138 |||||||||||| |||| ||||||||||| Sbjct: 38314 gcggcggcggcggcggccgcagcggcgtg 38342
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 34570091 ccgcggcggcggcggcggcggcagcggcg 34570119 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcggcggcgccggcagcagcggcg 136 ||||||||||||||| |||||||| Sbjct: 7737024 gcggcggcgccggcatcagcggcg 7737047
>gb|AF525691.2| Chlamydomonas reinhardtii RNA polymerase sigma factor (RpoD) gene, complete cds; nuclear gene for chloroplast product Length = 5013 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 3925 gcggcggcggcggcggcagcagcgg 3901
>ref|XM_991698.1| PREDICTED: Mus musculus growth differentiation factor 11 (Gdf11), mRNA Length = 1771 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 83 ccgcggcggcggcggcggcagcggcggcg 111
>ref|XM_125935.6| PREDICTED: Mus musculus growth differentiation factor 11 (Gdf11), mRNA Length = 1778 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 83 ccgcggcggcggcggcggcagcggcggcg 111
>ref|XM_838123.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1039) partial mRNA Length = 1524 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 cgcggcggcggcgccggcagcagcg 133 ||||||||||||| ||||||||||| Sbjct: 518 cgcggcggcggcgacggcagcagcg 494
>ref|XM_857738.1| PREDICTED: Canis familiaris similar to spastin isoform 1, transcript variant 2 (LOC608582), mRNA Length = 1959 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 39 cggcggcggcggcggcagcagcggc 63
>ref|XM_845880.1| PREDICTED: Canis familiaris similar to spastin isoform 1, transcript variant 1 (LOC608582), mRNA Length = 2055 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 39 cggcggcggcggcggcagcagcggc 63
>ref|XM_857687.1| PREDICTED: Canis familiaris similar to twist gene homolog 1, transcript variant 3 (LOC609156), mRNA Length = 1188 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 ||||||||||| ||||||||||||| Sbjct: 139 ggcggcggcgcgggcagcagcggcg 163
>emb|CR713406.2|CNS0GDEY Tetraodon nigroviridis full-length cDNA Length = 784 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 437 gcggcggcggcggcggcagcagcgg 413
>gb|BC099904.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone MGC:104542 IMAGE:5298373), complete cds Length = 1878 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 65 ggcggcggcggcggcagcagcggcg 41
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 4312 gcggcggcggcggcggcagcagcgg 4288
>gb|BC111545.1| Homo sapiens ring finger and KH domain containing 3, mRNA (cDNA clone MGC:117199 IMAGE:5742971), complete cds Length = 2411 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 458 gcggcggcggcggcggcagcagcgg 482
>emb|AL357395.13| Human DNA sequence from clone RP11-31L23 on chromosome 10 Contains the TLX1 gene for T-cell leukemia homeobox 1, the 5' end of a novel gene, the C10orf1 gene for chromosome 10 open reading frame 1 and four CpG islands, complete sequence Length = 51099 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 35619 ggcggcggcggcggcagcagcggcg 35643
>emb|AL353782.23| Human DNA sequence from clone RP11-207C11 on chromosome 9 Contains the 5' end of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2), the 3' end of a novel gene (FLJ36928), a CDC10 cell division cycle 10 homolog (S. cerevisiae) (SEPT7) pseudogene and a CpG island, complete sequence Length = 165358 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 114642 ccgcggcggcggcggcggcagcggcggcg 114670
>emb|AL157718.10| Human DNA sequence from clone RP11-23O13 on chromosome 20 Contains a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 84216 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 7407 gcggcggcggcggcggcagcagcgg 7383
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 75002 ccgcggcggcggcggcggcggcagcggcg 75030
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 27808 ccgcggcggcggcggcggcggcagcggcg 27836
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cggcagcagcggcgtgaaggc 143 ||||||||||||||||||||| Sbjct: 2393826 cggcagcagcggcgtgaaggc 2393846
>gb|BC068456.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone MGC:87045 IMAGE:4793291), complete cds Length = 2846 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 64 ggcggcggcggcggcagcagcggcg 40
>emb|AJ627180.1| Chlamydomonas reinhardtii sig1 gene for sigma-like transcription factor, exons 1-4 Length = 6047 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 5188 gcggcggcggcggcggcagcagcgg 5164
>emb|AJ009794.1|HSA9794 Homo sapiens hox11 proto-oncogene, exons 1 to 3 and hug-1 gene Length = 20074 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 12957 ggcggcggcggcggcagcagcggcg 12981
>emb|AJ720594.1| Gallus gallus mRNA for hypothetical protein, clone 20o23 Length = 3085 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 cgcggcggcggcgccggcagcagcg 133 ||||||||||||| ||||||||||| Sbjct: 17 cgcggcggcggcggcggcagcagcg 41
>gb|BC036211.1| Homo sapiens ring finger and KH domain containing 3, mRNA (cDNA clone MGC:39639 IMAGE:5266259), complete cds Length = 2840 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 480 gcggcggcggcggcggcagcagcgg 504
>gb|BC107540.1| Bos taurus similar to RPB5-mediating protein isoform a, mRNA (cDNA clone MGC:128688 IMAGE:7987387), complete cds Length = 2583 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 75 ccgcggcggcggcggcggctgcagcggcg 103
>dbj|AK131424.1| Homo sapiens cDNA FLJ16544 fis, clone OCBBF3003761 Length = 3398 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 359 gcggcggcggcggcggcagcagcgg 383
>emb|CR624253.1| full-length cDNA clone CS0DG005YN09 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1821 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 27 ggcggcggcggcggcagcagcggcg 3
>emb|CR623456.1| full-length cDNA clone CS0DF007YJ11 of Fetal brain of Homo sapiens (human) Length = 1562 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 63 ggcggcggcggcggcagcagcggcg 39
>gb|AC018781.9| Homo sapiens chromosome 8, clone RP11-302J23, complete sequence Length = 190984 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 162401 ggcggcggcggcggcagcagcggcg 162377
>ref|NM_165585.1| Drosophila melanogaster CG12769-RB, transcript variant B (CG12769), mRNA Length = 2958 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 648 ggcggcggcggcggcagcagcggcg 672
>ref|NM_136503.2| Drosophila melanogaster CG12769-RA, transcript variant A (CG12769), mRNA Length = 3866 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 1556 ggcggcggcggcggcagcagcggcg 1580
>gb|AY049085.1| Mus musculus ETS-domain transcription factor mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgtg 138 |||||||||||| |||| ||||||||||| Sbjct: 663 gcggcggcggcggcggccgcagcggcgtg 635
>gb|AY049086.1| Mus musculus ETS-domain transcription factor gene, complete cds Length = 4956 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgtg 138 |||||||||||| |||| ||||||||||| Sbjct: 4130 gcggcggcggcggcggccgcagcggcgtg 4102
>gb|AY070889.1| Drosophila melanogaster LD46223 full length cDNA Length = 3902 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 1550 ggcggcggcggcggcagcagcggcg 1574
>gb|BC072426.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone MGC:87788 IMAGE:6315583), complete cds Length = 2885 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 45 ggcggcggcggcggcagcagcggcg 21
>gb|BC003623.2| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone MGC:2153 IMAGE:2988020), complete cds Length = 1864 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 43 ggcggcggcggcggcagcagcggcg 19
>gb|S38742.1| HOX11=HOX11 homeodomain {homeobox} [human, mRNA, 1988 nt] Length = 1988 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 438 ggcggcggcggcggcagcagcggcg 462
>gb|AF054611.1|AF054611 Mus musculus JNK interacting protein-1b (JIP-1b) mRNA, complete cds Length = 2931 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 86 gcggcggcggcggcggcagcagcgg 62
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagca 130 ||||||||||||||||||||| Sbjct: 3456065 gcggcggcggcgccggcagca 3456085
>gb|AF260570.1|AF260570 Ovis aries activator protein 2 alpha variant 4 mRNA, complete cds Length = 3532 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 2642 cggcggcggcggcggcagcagcggc 2618
>gb|AF260569.1|AF260569 Ovis aries activator protein 2 alpha variant 7 mRNA, complete cds Length = 2813 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 1923 cggcggcggcggcggcagcagcggc 1899
>gb|AF260568.1|AF260568 Ovis aries activator protein 2 alpha variant 6 mRNA, complete cds Length = 1934 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggc 135 ||||||||||| ||||||||||||| Sbjct: 1522 cggcggcggcggcggcagcagcggc 1498
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 9656290 ccgcggcggcggcgccggccgccgcggcg 9656262 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcggcgtgaagg 142 ||||||||||| |||| || |||||||||||| Sbjct: 18134566 cggcggcggcggcggcggcggcggcgtgaagg 18134535 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcgccggcagcagcggcg 136 |||||||||||||||||||| Sbjct: 7185072 cggcgccggcagcagcggcg 7185091 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcg 133 |||||||||||| ||||||||||| Sbjct: 3130887 gcggcggcggcggcggcagcagcg 3130864
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 8405801 ccgcggcggcggcgccggccgccgcggcg 8405773 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 gcgccggcagcagcggcgtgaaggcggc 146 ||||||| ||||||||||||| |||||| Sbjct: 24351070 gcgccgggagcagcggcgtgacggcggc 24351043 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gaactcggcgtcgaagctct 267 |||||||||||||||||||| Sbjct: 17618326 gaactcggcgtcgaagctct 17618307 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcg 133 ||||||||||||||| |||||||| Sbjct: 9174898 gcggcggcggcgccgccagcagcg 9174921
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 34660163 ccgcggcggcggcggcggcggcagcggcg 34660191 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcggcggcgccggcagcagcggcg 136 ||||||||||||||| |||||||| Sbjct: 7734859 gcggcggcgccggcatcagcggcg 7734882
>ref|NM_022636.1| Rattus norvegicus ventral anterior homeobox 1 (Vax1), mRNA Length = 1011 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 699 ggcggcggcggcggcagcagcggcg 675
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 73242 ccgcggcggcggcggcggcggcagcggcg 73214
>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence Length = 215520 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 103029 gcggcggcggcggcggcagcagcgg 103005
>ref|NM_153111.1| Mus musculus FEV (ETS oncogene family) (Fev), mRNA Length = 1491 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgtg 138 |||||||||||| |||| ||||||||||| Sbjct: 665 gcggcggcggcggcggccgcagcggcgtg 637
>gb|AC091582.17| Homo sapiens chromosome 15, clone RP11-483O19, complete sequence Length = 90065 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 23848 ccgcggcggcggcggcggcggcagcggcg 23876
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 21518 ccgcggcggcggcgccggccgccgcggcg 21490
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 73376 ccgcggcggcggcggcggcggcagcggcg 73348
>dbj|AB180436.1| Plutella xylostella mRNA for 60S acidic ribosomal protein P1, complete cds Length = 482 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cgcggcggcggcgccggcagc 129 ||||||||||||||||||||| Sbjct: 315 cgcggcggcggcgccggcagc 295
>dbj|AK109671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B02, full insert sequence Length = 1093 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 346 ggcggcggcggcggcagcagcggcg 370
>gb|AF113515.1|AF113515 Rattus norvegicus ventral anterior homeobox 1 (Vax1) mRNA, complete cds Length = 1011 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 699 ggcggcggcggcggcagcagcggcg 675
>emb|AJ335196.1|HSA335196 Homo sapiens genomic sequence surrounding NotI site, clone NR5-CA19C Length = 623 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 154 ggcggcggcggcggcagcagcggcg 178
>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 79 ccgcggcggcggcgccggccgccgcggcg 51
>gb|AF028335.1|MMGDF11S01 Mus musculus growth/differentiation factor-11 (Gdf11) gene, exon 1 Length = 439 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 83 ccgcggcggcggcggcggcagcggcggcg 111
>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full insert sequence Length = 896 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 94 ccgcggcggcggcgccggccgccgcggcg 66
>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full insert sequence Length = 954 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 83 ccgcggcggcggcgccggccgccgcggcg 55
>dbj|AK059758.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E06, full insert sequence Length = 980 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 91 ccgcggcggcggcgccggccgccgcggcg 63
>gb|AY105672.1| Zea mays PCO122536 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 365 gcggcggcggcggcggcagcagcgg 341
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 14430 ggcggcggcggcggcagcagcggcg 14406
>gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, region 44A3-44A4, P1 clone DS02142, complete sequence Length = 76743 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 54494 ggcggcggcggcggcagcagcggcg 54518
>gb|AF107044.1|AF107044 Homo sapiens clone pCL4 DNA-binding protein SOX21 (SOX21) gene, complete cds Length = 8372 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| |||| ||||||||| Sbjct: 1665 ccgcggcggcggcggcggcggcagcggcg 1637
>ref|NM_011162.2| Mus musculus mitogen activated protein kinase 8 interacting protein 1 (Mapk8ip1), mRNA Length = 2931 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 86 gcggcggcggcggcggcagcagcgg 62
>gb|AF100904.1|MMBMPG1 Mus musculus bone morphogenetic factor 11 (Bmp11) gene, exon 1 Length = 439 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 83 ccgcggcggcggcggcggcagcggcggcg 111
>dbj|AB095929.1| Homo sapiens mRNA for KIAA2009 protein Length = 4333 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 458 gcggcggcggcggcggcagcagcgg 482
>gb|U28964.1|HSU28964 Homo sapiens 14-3-3 protein mRNA, complete cds Length = 1030 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 64 ggcggcggcggcggcagcagcggcg 40
>ref|NM_005521.2| Homo sapiens T-cell leukemia homeobox 1 (TLX1), mRNA Length = 2898 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 1358 ggcggcggcggcggcagcagcggcg 1382
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 ||||||||||||||||||| || |||||| Sbjct: 9727987 ccgcggcggcggcgccggccgccgcggcg 9727959 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcgtgaagg 142 ||||||||||| |||| || |||||||||||| Sbjct: 18268805 cggcggcggcggcggcggcggcggcgtgaagg 18268836 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcgccggcagcagcggcg 136 |||||||||||||||||||| Sbjct: 7250966 cggcgccggcagcagcggcg 7250985 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcg 133 |||||||||||| ||||||||||| Sbjct: 3139918 gcggcggcggcggcggcagcagcg 3139895
>gb|AC122380.4| Mus musculus BAC clone RP23-476C23 from 10, complete sequence Length = 210627 Score = 42.1 bits (21), Expect = 0.96 Identities = 27/29 (93%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggcg 136 |||||||||||||| ||||||| |||||| Sbjct: 49239 ccgcggcggcggcggcggcagcggcggcg 49211
>gb|BC013265.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, transcript variant 2, mRNA (cDNA clone IMAGE:3873977) Length = 2833 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 41 ggcggcggcggcggcagcagcggcg 17
>gb|BC083508.1| Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide, mRNA (cDNA clone MGC:87787 IMAGE:5563061), complete cds Length = 2901 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 43 ggcggcggcggcggcagcagcggcg 19
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 172723 ggcggcggcggcggcagcagcggcg 172699
>gb|AF003115.1|MMAF003115 Mus musculus JIP-1 (JIP-1) mRNA, complete cds Length = 2790 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 86 gcggcggcggcggcggcagcagcgg 62
>dbj|AB209119.1| Homo sapiens mRNA for eukaryotic translation initiation factor 4 gamma, 3 variant protein Length = 6193 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 168 gcggcggcggcggcggcagcagcgg 192
>gb|M75952.1|HUMHOX H.sapiens homeobox protein (HOX-11) mRNA, complete cds Length = 1872 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 352 ggcggcggcggcggcagcagcggcg 376
>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete sequence Length = 211034 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcgg 134 |||||||||||| |||||||||||| Sbjct: 182956 gcggcggcggcggcggcagcagcgg 182980
>gb|M62626.1|HUMTCL3 Human T lymphocyte homeobox protein mRNA, partial cds Length = 2898 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 1358 ggcggcggcggcggcagcagcggcg 1382
>dbj|AP004293.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1630B3 Length = 125644 Score = 42.1 bits (21), Expect = 0.96 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 ggcggcggcgccggcagcagcggcg 136 |||||||||| |||||||||||||| Sbjct: 120873 ggcggcggcggcggcagcagcggcg 120897
>ref|NM_189622.1| Oryza sativa (japonica cultivar-group), mRNA Length = 753 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagc 129 |||||||||||||||||||| Sbjct: 281 gcggcggcggcgccggcagc 262
>gb|AY665467.1| Homo sapiens clone D11-G10 basic helix-loop-helix protein 3 isoform 1 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3220 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 cgcggcggcggcgccggcagcagcggcg 136 ||||||||||||| ||||||| |||||| Sbjct: 1334 cgcggcggcggcggcggcagcggcggcg 1307
>gb|AY665466.1| Homo sapiens clone A10-B11 basic helix-loop-helix protein 3 isoform 2 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3098 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 cgcggcggcggcgccggcagcagcggcg 136 ||||||||||||| ||||||| |||||| Sbjct: 1058 cgcggcggcggcggcggcagcggcggcg 1031
>ref|XM_483115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 gcgccggcagcagcggcgtgaaggcggc 146 ||||||| ||||||||||||| |||||| Sbjct: 712 gcgccgggagcagcggcgtgacggcggc 685
>ref|XM_482078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gaactcggcgtcgaagctct 267 |||||||||||||||||||| Sbjct: 294 gaactcggcgtcgaagctct 275
>ref|XM_481004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcg 133 ||||||||||||||| |||||||| Sbjct: 413 gcggcggcggcgccgccagcagcg 390
>ref|XM_464828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 534 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcag 131 |||||||||||||| ||||||||| Sbjct: 167 ccgcggcggcggcggcggcagcag 144
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcgtg 138 ||||||||||| |||| ||||||||||| Sbjct: 3175228 cggcggcggcggcggcggcagcggcgtg 3175255
>ref|NM_005333.2| Homo sapiens holocytochrome c synthase (cytochrome c heme-lyase) (HCCS), mRNA Length = 2331 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 110 gcggcggcggcgccggcagcagcggcgtgaag 141 |||||||||||| |||| || ||||||||||| Sbjct: 26 gcggcggcggcggcggcggcggcggcgtgaag 57
>ref|NM_192865.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 306 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcggcggcgccggcagcagc 132 |||||||||||||||||||| Sbjct: 111 gcggcggcgccggcagcagc 130
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||| ||||| Sbjct: 202352 ccgcggcggcggcggcggcagctgcggc 202379
>ref|XM_479557.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2768 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcg 133 |||||||||||| ||||||||||| Sbjct: 256 gcggcggcggcggcggcagcagcg 233
>ref|NM_022384.1| Rattus norvegicus achaete-scute complex homolog-like 1 (Drosophila) (Ascl1), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| |||| |||||||| Sbjct: 841 ccgcggcggcggcggcggcggcagcggc 868
>ref|NM_186291.1| Oryza sativa (japonica cultivar-group), mRNA Length = 495 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gaactcggcgtcgaagctct 267 |||||||||||||||||||| Sbjct: 282 gaactcggcgtcgaagctct 263
>ref|NM_186284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gaactcggcgtcgaagctct 267 |||||||||||||||||||| Sbjct: 261 gaactcggcgtcgaagctct 242
>ref|XM_472809.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 cgcggcggcggcgccggcagcagcggcg 136 ||||||||||||| |||| ||||||||| Sbjct: 337 cgcggcggcggcggcggcggcagcggcg 364
>ref|NM_004670.3| Homo sapiens 3'-phosphoadenosine 5'-phosphosulfate synthase 2 (PAPSS2), transcript variant 1, mRNA Length = 3859 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ggaccgcggcggcggcgccggcagcagc 132 |||| |||||||||||| |||||||||| Sbjct: 209 ggacggcggcggcggcggcggcagcagc 182
>ref|NM_001015880.1| Homo sapiens 3'-phosphoadenosine 5'-phosphosulfate synthase 2 (PAPSS2), transcript variant 2, mRNA Length = 3874 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ggaccgcggcggcggcgccggcagcagc 132 |||| |||||||||||| |||||||||| Sbjct: 209 ggacggcggcggcggcggcggcagcagc 182
>gb|AF064848.1| Homo sapiens map 20q12; 3.87cR from WI-7121 repeat region, complete sequence Length = 345 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcggcgt 137 |||||||||||| |||| |||||||||| Sbjct: 221 gcggcggcggcggcggcggcagcggcgt 194
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 gcggcggcggcgccggcagcagcg 133 |||||||||||| ||||||||||| Sbjct: 136257 gcggcggcggcggcggcagcagcg 136234
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcgccggcagcagcggcg 136 |||||||||||||||||||| Sbjct: 98215 cggcgccggcagcagcggcg 98234
>ref|NM_172947.1| Mus musculus RIKEN cDNA 2600001B17 gene (2600001B17Rik), mRNA Length = 1226 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 cggcggcggcgccggcagcagcgg 134 ||||||||||| |||||||||||| Sbjct: 32 cggcggcggcggcggcagcagcgg 9
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 ccgcggcggcggcgccggcagcagcggc 135 |||||||||||||| ||||||| ||||| Sbjct: 101736 ccgcggcggcggcggcggcagctgcggc 101709
>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0001I22, complete sequence Length = 162413 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 cggcggcggcgccggcagcagcggcgtgaagg 142 ||||||||||| |||| || |||||||||||| Sbjct: 104062 cggcggcggcggcggcggcggcggcgtgaagg 104093 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,005,130 Number of Sequences: 3902068 Number of extensions: 2005130 Number of successful extensions: 82724 Number of sequences better than 10.0: 514 Number of HSP's better than 10.0 without gapping: 529 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75649 Number of HSP's gapped (non-prelim): 7023 length of query: 290 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 268 effective length of database: 17,147,199,772 effective search space: 4595449538896 effective search space used: 4595449538896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)