>GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)|
          Length = 2238

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 467 QSLAD*VAGNSTCTIXQMMDQRVHCQLQLDETCTLLTGSHRQACA 333
           + + + V G ++    +M+ QRV  Q  L + C    GSH++ CA
Sbjct: 286 EGVGEPVGGGTSAKTLEMLQQRVKRQENLLQRCKETIGSHKEQCA 330

>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD|
           epsilon) (PLDalpha3)
          Length = 762

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 342 SLRFKHKGLDSCGNAIV*LGSYTNRWRNTNNPNMVHNLQVSLHFDHT 202
           S     + +D C +  + +G Y     NTNN N +   ++SL ++HT
Sbjct: 630 SANINQRSMDGCRDTEIAIGCYQT---NTNNTNEIQAYRLSLWYEHT 673

>YBBA_SHIFL (P0A9U0) Hypothetical ABC transporter ATP-binding protein ybbA|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 417 DDGSEGPLSTTTRRDLHSFDRQSSASLRFKHKG 319
           DDGS G +S   +  LH+ D ++ A LR KH G
Sbjct: 60  DDGSSGEVSLVGQ-PLHNMDEEARAKLRAKHVG 91

>YBBA_ECOLI (P0A9T8) Hypothetical ABC transporter ATP-binding protein ybbA|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 417 DDGSEGPLSTTTRRDLHSFDRQSSASLRFKHKG 319
           DDGS G +S   +  LH+ D ++ A LR KH G
Sbjct: 60  DDGSSGEVSLVGQ-PLHNMDEEARAKLRAKHVG 91

>YBBA_ECO57 (P0A9T9) Hypothetical ABC transporter ATP-binding protein ybbA|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 417 DDGSEGPLSTTTRRDLHSFDRQSSASLRFKHKG 319
           DDGS G +S   +  LH+ D ++ A LR KH G
Sbjct: 60  DDGSSGEVSLVGQ-PLHNMDEEARAKLRAKHVG 91

>I17RB_MOUSE (Q9JIP3) Interleukin-17 receptor B precursor (IL-17 receptor B)|
           (IL-17RB) (Interleukin-17B receptor) (IL-17B receptor)
           (IL-17 receptor homolog 1) (IL-17Rh1) (IL17Rh1)
           (IL-17ER)
          Length = 499

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = +3

Query: 183 SDHSLPLCGQNEGRPVNCVPY*GYSYFSICSCTNQARQWRCHKNPNPCA*SASL---PMT 353
           S H++P    NE  P   V       F+   C N   +++       C  + SL    +T
Sbjct: 137 SAHNIPNANMNEDSPSLSVN------FTSPGCLNHVMKYK-----KQCTEAGSLWDPDIT 185

Query: 354 ACQKSASLVEL*LTMDPL 407
           AC+K+  +VE+  T +PL
Sbjct: 186 ACKKNEKMVEVNFTTNPL 203

>VIT6_OSCBR (Q94637) Vitellogenin 6 precursor|
          Length = 1660

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -1

Query: 431  CTIXQMMDQRVH-CQLQLDETCTLLTGSHRQACASSTRVWILVATP--LSSLVRTRTDGE 261
            C I  + D+RV  C+L LD + + + G  RQ    S+  W+    P  +  ++ +R +  
Sbjct: 1134 CEIRALCDERVRFCRLNLDASRSPIQGESRQWQLKSSAEWLYPEVPSTMKKMLESRREWN 1193

Query: 260  IRITLIW 240
               T  W
Sbjct: 1194 AMWTGKW 1200

>HST3_ECOLI (P07965) Heat-stable enterotoxin A3/A4 precursor (STA3/STA4)|
           (ST-IB) (ST-H)
          Length = 72

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +2

Query: 251 LFVFLHLFVYEPS*TMALPQESKPLCLKRKLADDCLSKECKSRRVVVDNGPSDPSSGXWC 430
           LF+FL +  + P    A P ES     K K+  +  SK+C   +    +GP   +S  +C
Sbjct: 6   LFIFLSVLSFSPFAQDAKPVESS----KEKITLE--SKKCNIAKKSNKSGPESMNSSNYC 59

Query: 431 KCCCLRP 451
              C  P
Sbjct: 60  CELCCNP 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,808,499
Number of Sequences: 219361
Number of extensions: 1448241
Number of successful extensions: 3272
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)