ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHR_THET2 (P61496) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.... 31 0.99
2PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.... 30 2.9
3MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4... 29 3.7
4WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 pr... 29 4.9
5EOMES_HUMAN (O95936) Eomesodermin homolog 29 4.9
6AHR_MUSSP (Q8R4S2) Aryl hydrocarbon receptor precursor (Ah recep... 28 8.3
7AHR_MUSSI (Q8R4S4) Aryl hydrocarbon receptor precursor (Ah recep... 28 8.3
8EFG2_PSEHT (Q3IJW9) Elongation factor G 2 (EF-G 2) 28 8.3
9AHR_MUSMM (Q8R4S5) Aryl hydrocarbon receptor precursor (Ah recep... 28 8.3
10AHR_MUSMC (Q8R4S6) Aryl hydrocarbon receptor precursor (Ah recep... 28 8.3
11AHR_MOUSE (P30561) Aryl hydrocarbon receptor precursor (Ah recep... 28 8.3

>PHR_THET2 (P61496) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 420

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 27/87 (31%), Positives = 34/87 (39%)
 Frame = +1

Query: 7   SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186
           +L S T   R   AK++ EA PV     P     PP    A+                 P
Sbjct: 93  ALTSYTPYGRYRDAKVQ-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFARRFLGVEAPLP 151

Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267
            +P  L  G E GEI   + GLP+P P
Sbjct: 152 -APEALPKGPEEGEIPREDPGLPLPEP 177



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>PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 420

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 26/87 (29%), Positives = 32/87 (36%)
 Frame = +1

Query: 7   SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186
           +L S T   R    ++R EA PV     P     PP    A+                 P
Sbjct: 93  ALTSHTPYGRYRDGRVR-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLP 151

Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267
             P  L  G E GEI   + GLP+P P
Sbjct: 152 -PPEALPKGPEEGEIPREDPGLPLPEP 177



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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
           zinc finger protein-related factor) (Histone
           acetyltransferas
          Length = 2073

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
 Frame = +1

Query: 91  PPSDRCPPSPLTAHSPXXXXXXXXXXX----XXXXPCSPSTLLPGMENGEIEAAEDGL 252
           PPS   PP+P++  SP                    CS  +L     N +++A  DGL
Sbjct: 490 PPSSLPPPTPISGQSPSSQKSSTATSSPSPQSSSSQCSVPSLSSLTTNSQLKALFDGL 547



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>WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 precursor|
           (Prostate stromal protein ps20) (ps20 growth inhibitor)
          Length = 220

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 19  KTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLT 126
           + L AR+      +EA       QP +DRCPP P T
Sbjct: 37  RALPARLAEKSRAEEAGAPGGPRQPRADRCPPPPRT 72



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>EOMES_HUMAN (O95936) Eomesodermin homolog|
          Length = 686

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 190 SPSTLLPGMENGEIEAAEDGLPVPAPPNGRRYRPVGSDD 306
           +P+ +L   + G+  A+   +  P PP+GR+  P G ++
Sbjct: 75  APAAMLSDTDAGDAFASAAAVAKPGPPDGRKGSPCGEEE 113



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>AHR_MUSSP (Q8R4S2) Aryl hydrocarbon receptor precursor (Ah receptor) (AhR)|
          Length = 854

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 17  QRLCRPGCPAQK*GTKQTQ----FRSFSNPPPTVAHLPR 121
           Q+LC+  CP Q  G K TQ    F S++  PP   + P+
Sbjct: 636 QQLCQMVCPQQDLGPKHTQINGTFASWNPTPPVSFNCPQ 674



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>AHR_MUSSI (Q8R4S4) Aryl hydrocarbon receptor precursor (Ah receptor) (AhR)|
          Length = 854

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 17  QRLCRPGCPAQK*GTKQTQ----FRSFSNPPPTVAHLPR 121
           Q+LC+  CP Q  G K TQ    F S++  PP   + P+
Sbjct: 636 QQLCQMVCPQQDLGPKHTQINGTFASWNPTPPVSFNCPQ 674



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>EFG2_PSEHT (Q3IJW9) Elongation factor G 2 (EF-G 2)|
          Length = 694

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 413 GLRFLGGWGVMASWPVTEVEVEPGLGSMEVIWMTALSSE 297
           G + + G GV+A +PV +VEVE   G    +  +A++ E
Sbjct: 541 GFKSMMGTGVLAGFPVLDVEVELFDGGFHAVDSSAIAFE 579



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>AHR_MUSMM (Q8R4S5) Aryl hydrocarbon receptor precursor (Ah receptor) (AhR)|
          Length = 883

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 17  QRLCRPGCPAQK*GTKQTQ----FRSFSNPPPTVAHLPR 121
           Q+LC+  CP Q  G K TQ    F S++  PP   + P+
Sbjct: 630 QQLCQMVCPQQDLGPKHTQINGTFASWNPTPPVSFNCPQ 668



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>AHR_MUSMC (Q8R4S6) Aryl hydrocarbon receptor precursor (Ah receptor) (AhR)|
          Length = 848

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 17  QRLCRPGCPAQK*GTKQTQ----FRSFSNPPPTVAHLPR 121
           Q+LC+  CP Q  G K TQ    F S++  PP   + P+
Sbjct: 630 QQLCQMVCPQQDLGPKHTQINGTFASWNPTPPVSFNCPQ 668



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>AHR_MOUSE (P30561) Aryl hydrocarbon receptor precursor (Ah receptor) (AhR)|
          Length = 848

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 17  QRLCRPGCPAQK*GTKQTQ----FRSFSNPPPTVAHLPR 121
           Q+LC+  CP Q  G K TQ    F S++  PP   + P+
Sbjct: 630 QQLCQMVCPQQDLGPKHTQINGTFASWNPTPPVSFNCPQ 668


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.133    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,956,984
Number of Sequences: 219361
Number of extensions: 799019
Number of successful extensions: 1946
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1943
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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