ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38h02 |
|---|---|
| Clone Library Name | barley_pub |
>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)| Length = 1875 Score = 37.0 bits (84), Expect = 0.028 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Frame = +3 Query: 192 VSQEHTDILSDDFAKRNDNVQQDQNQGLLMATDKASDK-----ELNTQNDVMTECGNSES 356 V EH + + F +R D ++ + N L+ +++K ELN +N + EC N Sbjct: 412 VELEHKVPIINSFKERTDMLENELNNAALLLEHTSNEKNAKVKELNAKNQKLVECENDLQ 471 Query: 357 LIDVNVCDICGDVGREYLLAT 419 + D+C + +YLL T Sbjct: 472 TLTKQRLDLCRQI--QYLLIT 490
>NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) (Nuclear pore| protein NUP145) [Contains: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)] Length = 1317 Score = 33.1 bits (74), Expect = 0.41 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +3 Query: 192 VSQEHTDILSDDFAKRNDNVQQDQNQGLLMATDKASDKE--LNTQNDVMTECGNSESLID 365 V++E +I DD +K+ D +Q + +A K SDKE L T T G +S+++ Sbjct: 611 VNEEDAEIDEDDLSKQEDGGEQPLRKVRTLAQSKPSDKEVILKTDGTFGTLSGKDDSIVE 670
>41_XENLA (P11434) Cytoskeletal protein 4.1 (Band 4.1)| Length = 801 Score = 32.3 bits (72), Expect = 0.70 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%) Frame = +3 Query: 147 SSSVELESGARCTRNVSQEHTDILSDDF-AKRNDNVQQDQNQGLLMA----TDKASDKEL 311 S++ E G T+ V HT+ + + A R+D+V DQ G+L+ T + + Sbjct: 679 SNATNGEKGEIPTKEVPLVHTETKTITYEAARSDDVNTDQEPGILLTAHTITSETTSSTT 738 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGD 392 TQ + G SE+LI+ + I GD Sbjct: 739 TTQITKTVKGGISETLIEKRIV-ITGD 764
>FANCM_HUMAN (Q8IYD8) Fanconi anemia group M protein (EC 3.6.1.-) (ATP-dependent| RNA helicase FANCM) (Protein FACM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog) Length = 2048 Score = 32.3 bits (72), Expect = 0.70 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 21/108 (19%) Frame = +3 Query: 102 VTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEH--------------TDILSDDFAKR 239 +T +S I GSSS +ES C V Q H +I D K Sbjct: 810 ITHKKSSFIKNINQGSSSSVIESDEECAEIVKQTHIKPTKIVSLKKKVSKEIKKDQLKKE 869 Query: 240 N-----DNVQQDQNQGL--LMATDKASDKELNTQNDVMTECGNSESLI 362 N D+V D+N + + D +DK + +++ C +E++I Sbjct: 870 NNHGIIDSVDNDRNSTVENIFQEDLPNDKRTSDTDEIAATCTINENVI 917
>NIA_CUCMA (P17569) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 918 Score = 31.6 bits (70), Expect = 1.2 Identities = 26/92 (28%), Positives = 39/92 (42%) Frame = +3 Query: 93 HDMVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQG 272 H V C+ K+ GS S+ + +G CT E D + D AK+ + +D G Sbjct: 565 HGHVYDCTRFLKDH-PGGSDSILINAGTDCT-----EEFDAIHSDKAKK---MLEDYRIG 615 Query: 273 LLMATDKASDKELNTQNDVMTECGNSESLIDV 368 L+ T ASD N+ N+ N L + Sbjct: 616 ELITTGYASDSSSNSPNNSTHGASNFSHLAPI 647
>Y504_TROW8 (P67192) UPF0082 protein TW504| Length = 252 Score = 31.6 bits (70), Expect = 1.2 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Frame = +3 Query: 24 VPNNDID------------HLPGGKLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELE 167 VPN++ID H+ L V D ++ C T NKN+ AG S+ Sbjct: 61 VPNDNIDRAIKRGSGLTGEHINYVSLVYEVKAFDGVALLVECLTDNKNRCAAGIRSIVTR 120 Query: 168 SGARCTRNVSQEHTDILSDDFAKRNDNVQQDQN-QGLLMATDKASDKELNTQNDVMTECG 344 SG S + L+ +F ++ V QD++ G L++ D L + D + G Sbjct: 121 SGC------SMVNPGSLAYNFKRKGIVVLQDRDANGNLLSEDLVLSAVLEAEVDDIVPTG 174 Query: 345 NSESLIDVN------VCDICGDVGREY 407 + I VC+ D G +Y Sbjct: 175 DCGFEIIAEPSNLSAVCNALRDSGIQY 201
>Y266_TROWT (P67191) UPF0082 protein TWT_266| Length = 252 Score = 31.6 bits (70), Expect = 1.2 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Frame = +3 Query: 24 VPNNDID------------HLPGGKLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELE 167 VPN++ID H+ L V D ++ C T NKN+ AG S+ Sbjct: 61 VPNDNIDRAIKRGSGLTGEHINYVSLVYEVKAFDGVALLVECLTDNKNRCAAGIRSIVTR 120 Query: 168 SGARCTRNVSQEHTDILSDDFAKRNDNVQQDQN-QGLLMATDKASDKELNTQNDVMTECG 344 SG S + L+ +F ++ V QD++ G L++ D L + D + G Sbjct: 121 SGC------SMVNPGSLAYNFKRKGIVVLQDRDANGNLLSEDLVLSAVLEAEVDDIVPTG 174 Query: 345 NSESLIDVN------VCDICGDVGREY 407 + I VC+ D G +Y Sbjct: 175 DCGFEIIAEPSNLSAVCNALRDSGIQY 201
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 30.8 bits (68), Expect = 2.0 Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 9/151 (5%) Frame = +3 Query: 6 QQPYEKVP---NNDIDHLPGGKLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSS-VELESG 173 ++ +E +P N+ +H P S P G+ V S STS + +GSSS V E G Sbjct: 75 ERTHEIIPANVNSSYEHRPA---SHP---GNARGSVLSRSTSTGSAASSGSSSSVSSEQG 128 Query: 174 ----ARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQGLLMATDKASDKELNTQNDVMTE- 338 + TR + R+D V + Q + LL+ KAS KE TQ+ + E Sbjct: 129 LLGRSPPTRPIP-----------GHRSDRVIRTQPKQLLVEDLKASLKEDPTQHKFICEQ 177 Query: 339 CGNSESLIDVNVCDICGDVGREYLLATCTRC 431 CG + CG+ L +C C Sbjct: 178 CGKCK----------CGECTAPRALPSCLAC 198
>SEF1_ASHGO (Q74Z37) Suppressor protein SEF1 homolog| Length = 1051 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 60 KLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELESGARCTR 188 K+S+ G H VTSC+ ++KIK +S S +RC R Sbjct: 75 KVSKQQNGASGHRPVTSCTHCRQHKIKCNASENFPSSCSRCER 117
>LBD2_ARATH (Q9LNB9) Putative LOB domain protein 2| Length = 205 Score = 30.0 bits (66), Expect = 3.5 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +3 Query: 66 SRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRN- 242 ++P+IG D + V + +++NKN + +SS G N + +I++ +A RN Sbjct: 118 NQPLIGWDNNQRVFNNNSNNKNGLAMTNSSG--SGGFSVNNNGVGVNREIVNGGYASRNV 175 Query: 243 ----DNVQQDQNQ 269 +N++ DQ Q Sbjct: 176 QGGWENLKHDQRQ 188
>PARG_DROME (O46043) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)| Length = 768 Score = 30.0 bits (66), Expect = 3.5 Identities = 25/83 (30%), Positives = 40/83 (48%) Frame = +3 Query: 126 KNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQGLLMATDKASDK 305 K++ A SS + AR ++Q+ TD+L ++ N N +D Q LLM +D D+ Sbjct: 620 KSETSAKSSPELNKQPARPQITITQQSTDLLPAQLSQDNSNSSED--QALLMLSD---DE 674 Query: 306 ELNTQNDVMTECGNSESLIDVNV 374 E N M E + E+ V + Sbjct: 675 EAN----AMMEAASLEAKSSVEI 693
>INO80_KLULA (Q6CNY4) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1489 Score = 30.0 bits (66), Expect = 3.5 Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Frame = +3 Query: 45 HLPGGKLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSD 224 H G K+ + G D + ++NKNK+ V+L A NV E D ++ Sbjct: 635 HFIGSKIKTNELEGTMTDDSLTSMSNNKNKV------VDLTKTAASKTNV--ESIDFATE 686 Query: 225 DFAKRNDNVQQDQNQGLLMATDKA--------SDKELNTQN 323 D K Q+ + L DKA D ELN QN Sbjct: 687 DDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQN 727
>BAP29_MOUSE (Q61334) B-cell receptor-associated protein 29 (BCR-associated| protein Bap29) Length = 240 Score = 29.6 bits (65), Expect = 4.5 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 11/98 (11%) Frame = +3 Query: 99 MVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQ------- 257 +VT + K G ++ E+ + + +E+ + RNDN ++ Sbjct: 120 LVTLITQLAKEIANKGVLKIQAENTNKAAKKFMEENEKL---KLGLRNDNAEEHLLEAEN 176 Query: 258 ----DQNQGLLMATDKASDKELNTQNDVMTECGNSESL 359 + + L KASD L QNDVMT SE L Sbjct: 177 KKLIESKENLKTELKKASDALLKAQNDVMTMKIQSERL 214
>PSO2_YEAST (P30620) DNA cross-link repair protein PSO2/SNM1 (EC 3.1.-.-)| Length = 661 Score = 29.3 bits (64), Expect = 5.9 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = +3 Query: 108 SCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQGLLMAT 287 SCSTSNKN + V + +H I +D AK + D+ + + + Sbjct: 69 SCSTSNKN-----TEPVIIN---------DDDHNSICLEDTAKVEITIDTDEEELVSLHD 114 Query: 288 DKASDKELNTQNDVMTECG---NSESLIDVNVCDIC 386 ++ S E T++ ++TE N + +V C IC Sbjct: 115 NEVSAIENRTEDRIVTELEEQVNVKVSTEVIQCPIC 150
>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 679 Score = 29.3 bits (64), Expect = 5.9 Identities = 15/54 (27%), Positives = 28/54 (51%) Frame = +3 Query: 108 SCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQ 269 S S S+ + S E ESG++ ++ S E +S D + ++ ++ +QNQ Sbjct: 68 SDSDSDSSSESESESEPESESGSQDSKKSSSESDSAMSSDTEEASEEIEGNQNQ 121
>RORG_MOUSE (P51450) Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma)| (Thymus orphan receptor) (TOR) Length = 516 Score = 29.3 bits (64), Expect = 5.9 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +3 Query: 288 DKASDKELNTQNDVMTECGNSESLIDVNVCDICGD--VGREYLLATCTRCLEGAEHTY*C 461 D+A + T +++ S I+V C ICGD G Y + TC C + C Sbjct: 2 DRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQC 61 Query: 462 E*SWTSSR 485 +++ +R Sbjct: 62 NVAYSCTR 69
>ERR3_RAT (P62510) Estrogen-related receptor gamma (Estrogen receptor-related| protein 3) Length = 458 Score = 26.6 bits (57), Expect(2) = 7.6 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 324 DVMTECGNSESLIDVNVCDICGDV--GREYLLATCTRC 431 D T+C + + +C +CGD+ G Y +A+C C Sbjct: 111 DPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEAC 148 Score = 20.8 bits (42), Expect(2) = 7.6 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 149 IISGTGKWRPLHEECQS 199 I+ G+G R L+++C S Sbjct: 90 ILGGSGPVRKLYDDCSS 106
>ERR3_MOUSE (P62509) Estrogen-related receptor gamma (Estrogen receptor-related| protein 3) Length = 458 Score = 26.6 bits (57), Expect(2) = 7.6 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 324 DVMTECGNSESLIDVNVCDICGDV--GREYLLATCTRC 431 D T+C + + +C +CGD+ G Y +A+C C Sbjct: 111 DPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEAC 148 Score = 20.8 bits (42), Expect(2) = 7.6 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 149 IISGTGKWRPLHEECQS 199 I+ G+G R L+++C S Sbjct: 90 ILGGSGPVRKLYDDCSS 106
>ERR3_HUMAN (P62508) Estrogen-related receptor gamma (Estrogen receptor-related| protein 3) (ERR gamma-2) Length = 458 Score = 26.6 bits (57), Expect(2) = 7.6 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 324 DVMTECGNSESLIDVNVCDICGDV--GREYLLATCTRC 431 D T+C + + +C +CGD+ G Y +A+C C Sbjct: 111 DPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEAC 148 Score = 20.8 bits (42), Expect(2) = 7.6 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 149 IISGTGKWRPLHEECQS 199 I+ G+G R L+++C S Sbjct: 90 ILGGSGPVRKLYDDCSS 106
>ERR3_PONPY (Q5RAM2) Estrogen-related receptor gamma (Estrogen receptor-related| protein 3) Length = 435 Score = 26.6 bits (57), Expect(2) = 7.6 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 324 DVMTECGNSESLIDVNVCDICGDV--GREYLLATCTRC 431 D T+C + + +C +CGD+ G Y +A+C C Sbjct: 88 DPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEAC 125 Score = 20.8 bits (42), Expect(2) = 7.6 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 149 IISGTGKWRPLHEECQS 199 I+ G+G R L+++C S Sbjct: 67 ILGGSGPVRKLYDDCSS 83
>EWG_DROME (Q24312) DNA-binding protein Ewg (Protein erect wing)| Length = 733 Score = 28.9 bits (63), Expect = 7.7 Identities = 23/109 (21%), Positives = 41/109 (37%) Frame = +3 Query: 45 HLPGGKLSRPVIGGDKHDMVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSD 224 HLP +PV GG + + ++ +++ + + + SQ H S Sbjct: 457 HLPNAVHIQPVAGGQPQTIQLTTASGTATATAVQTTAAAVSAAQAHAHSQSQAH----SQ 512 Query: 225 DFAKRNDNVQQDQNQGLLMATDKASDKELNTQNDVMTECGNSESLIDVN 371 A + QQ N + + SD + TQ + + SLI V+ Sbjct: 513 SSANQTVTAQQIANAQVCIEPITLSDVDYTTQTVLSQNADGTVSLIQVD 561
>IMA2_MOUSE (P52293) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| (SRP1-alpha) (RAG cohort protein 1) (Pendulin) (Pore targeting complex 58 kDa subunit) (PTAC58) (Importin alpha P1) Length = 529 Score = 28.9 bits (63), Expect = 7.7 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Frame = +3 Query: 96 DMVTSCSTSNKNKIKAGSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQGL 275 ++VT + I AG+ +V N+ +E T +S+ A R D +QQ N GL Sbjct: 319 NIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL 378 Query: 276 -------LMATDKASDKELNTQNDVMTECGNSESLIDVNVCDI 383 L D + KE T G E ++ + C I Sbjct: 379 VPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGI 421
>NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)| Length = 881 Score = 28.9 bits (63), Expect = 7.7 Identities = 22/71 (30%), Positives = 31/71 (43%) Frame = +3 Query: 144 GSSSVELESGARCTRNVSQEHTDILSDDFAKRNDNVQQDQNQGLLMATDKASDKELNTQN 323 G S+ L +G CT H+D + + +D G LM TD SD ++ N Sbjct: 553 GEDSILLNAGTDCTEEFEAIHSD--------KAKKMLEDYRIGELMTTDYTSDSS-SSNN 603 Query: 324 DVMTECGNSES 356 V GNSE+ Sbjct: 604 SVH---GNSET 611
>RPO2_VACCA (O57230) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1156 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1060 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1098
>RPO2_VACCV (Q76ZP7) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1164 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1068 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1106
>RPO2_VACCT (Q9JF79) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1164 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1068 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1106
>RPO2_VACCC (P68694) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1164 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1068 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1106
>RPO2_RABPU (Q6RZF8) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1164 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1068 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1106
>RPO2_CWPXB (P17474) DNA-directed RNA polymerase 132 kDa polypeptide (EC 2.7.7.6)| Length = 1164 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 312 NTQNDVMTECGNSESLIDVNVCDICGDVGREYL-LATCTRC 431 NT +V+ + + E DV VC+ CGD+ + + TC RC Sbjct: 1068 NTITEVLKD--SEEDYQDVYVCENCGDIAAQIKGINTCLRC 1106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,785,832 Number of Sequences: 219361 Number of extensions: 1293981 Number of successful extensions: 3862 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3766 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3861 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
