ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479900.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
2ref|NM_192940.1| Oryza sativa (japonica cultivar-group), predic... 42 0.75
3ref|NM_193135.2| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
4ref|NM_193131.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
5dbj|AK076423.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 42 0.75
6ref|NG_001395.1| Mus musculus high mobility group AT-hook 2, pse... 42 0.75
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
10dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
11dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
12dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
13dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
14dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
15dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.75
16dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.75
17gb|AY104443.1| Zea mays PCO095642 mRNA sequence 42 0.75
18gb|L41343.1|MUSHCPB Mus musculus high mobility group I-C (Hmgi-p... 42 0.75
19ref|XM_476374.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.9
20ref|XM_472253.1| Oryza sativa (japonica cultivar-group), predic... 40 2.9
21gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
22ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 2.9
23gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 2.9
24ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage... 40 2.9
25ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage... 40 2.9
26ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage... 40 2.9
27gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 2.9
28emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4,... 40 2.9
29emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4,... 40 2.9
30gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 2.9
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
35emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4,... 40 2.9
36emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chro... 40 2.9
37dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
38dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
39dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
40dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
41dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
42dbj|AK111268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
43dbj|AK068377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
44emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in... 40 2.9
45dbj|AK062807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
46emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in... 40 2.9
47gb|U01158.1|U01158 Rhodospirillum rubrum nicotinamide nucleotide... 40 2.9
48gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
49emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.9
50gb|U05294.1|RRU05294 Rhodospirillum rubrum S1 proton-translocati... 40 2.9 
>ref|XM_479900.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1236

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 73  gccgccgccgccaccatccac 93
           |||||||||||||||||||||
Sbjct: 969 gccgccgccgccaccatccac 949
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>ref|NM_192940.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 70  ccagccgccgccgccaccatc 90
           |||||||||||||||||||||
Sbjct: 525 ccagccgccgccgccaccatc 505
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>ref|NM_193135.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1895

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 74  ccgccgccgccaccatccacc 94
           |||||||||||||||||||||
Sbjct: 209 ccgccgccgccaccatccacc 189
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>ref|NM_193131.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1563

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 73 gccgccgccgccaccatccac 93
          |||||||||||||||||||||
Sbjct: 35 gccgccgccgccaccatccac 15
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>dbj|AK076423.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4831435K15 product:strain Swiss
            Webster/NIH actin-associated protein palladin mRNA, full
            insert sequence
          Length = 3903

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 67   ctgccagccgccgccgccacc 87
            |||||||||||||||||||||
Sbjct: 1490 ctgccagccgccgccgccacc 1510
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>ref|NG_001395.1| Mus musculus high mobility group AT-hook 2, pseudogene 1
          (Hmga2-ps1) on chromosome 1
          Length = 589

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 73 gccgccgccgccaccatccac 93
          |||||||||||||||||||||
Sbjct: 32 gccgccgccgccaccatccac 12
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 73      gccgccgccgccaccatccac 93
               |||||||||||||||||||||
Sbjct: 1538173 gccgccgccgccaccatccac 1538193
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 74       ccgccgccgccaccatccacc 94
                |||||||||||||||||||||
Sbjct: 26329212 ccgccgccgccaccatccacc 26329192



 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 73       gccgccgccgccaccatccac 93
                |||||||||||||||||||||
Sbjct: 26313704 gccgccgccgccaccatccac 26313684



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     cagccgccgccgccaccatc 90
              ||||||||||||||||||||
Sbjct: 305231 cagccgccgccgccaccatc 305250
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 70       ccagccgccgccgccaccatc 90
                |||||||||||||||||||||
Sbjct: 25275229 ccagccgccgccgccaccatc 25275249



 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 73       gccgccgccgccaccatccac 93
                |||||||||||||||||||||
Sbjct: 19819774 gccgccgccgccaccatccac 19819794



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 69       gccagccgccgccgccacca 88
                ||||||||||||||||||||
Sbjct: 25275645 gccagccgccgccgccacca 25275664
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>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1158C05
          Length = 145514

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    ccagccgccgccgccaccatc 90
             |||||||||||||||||||||
Sbjct: 72273 ccagccgccgccgccaccatc 72293



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    gccagccgccgccgccacca 88
             ||||||||||||||||||||
Sbjct: 72689 gccagccgccgccgccacca 72708
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>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0047D12
          Length = 145981

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    gccgccgccgccaccatccac 93
             |||||||||||||||||||||
Sbjct: 42732 gccgccgccgccaccatccac 42752
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>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    gccgccgccgccaccatccac 93
             |||||||||||||||||||||
Sbjct: 88332 gccgccgccgccaccatccac 88312
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>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1332_C12
          Length = 67349

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    ccgccgccgccaccatccacc 94
             |||||||||||||||||||||
Sbjct: 48790 ccgccgccgccaccatccacc 48770



 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    gccgccgccgccaccatccac 93
             |||||||||||||||||||||
Sbjct: 33282 gccgccgccgccaccatccac 33262
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1163_G08
          Length = 150676

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    gccgccgccgccaccatccac 93
             |||||||||||||||||||||
Sbjct: 65661 gccgccgccgccaccatccac 65681
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>dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083C10, full
           insert sequence
          Length = 1914

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 74  ccgccgccgccaccatccacc 94
           |||||||||||||||||||||
Sbjct: 210 ccgccgccgccaccatccacc 190
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>dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A08, full
           insert sequence
          Length = 1895

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 74  ccgccgccgccaccatccacc 94
           |||||||||||||||||||||
Sbjct: 209 ccgccgccgccaccatccacc 189
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>gb|AY104443.1| Zea mays PCO095642 mRNA sequence
          Length = 1246

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 60 tagggttctgccagccgccgccgcc 84
          |||||||||||| ||||||||||||
Sbjct: 71 tagggttctgcccgccgccgccgcc 95
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>gb|L41343.1|MUSHCPB Mus musculus high mobility group I-C (Hmgi-ps) pseudogene,
          partial sequence
          Length = 589

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 73 gccgccgccgccaccatccac 93
          |||||||||||||||||||||
Sbjct: 32 gccgccgccgccaccatccac 12
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>ref|XM_476374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  cagccgccgccgccaccatc 90
           ||||||||||||||||||||
Sbjct: 180 cagccgccgccgccaccatc 199
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>ref|XM_472253.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 405

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 67  ctgccagccgccgccgccaccatc 90
           ||||| ||||||||||||||||||
Sbjct: 227 ctgcctgccgccgccgccaccatc 204
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>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    gccagccgccgccgccacca 88
             ||||||||||||||||||||
Sbjct: 40727 gccagccgccgccgccacca 40746
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>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA
          Length = 3165

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  ctggccgtccgccctggtcc 169
            ||||||||||||||||||||
Sbjct: 2580 ctggccgtccgccctggtcc 2599
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      gccagccgccgccgccacca 88
               ||||||||||||||||||||
Sbjct: 1284939 gccagccgccgccgccacca 1284920
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>ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation
           specificity factor, 73 kDa subunit (CPSF 73 kDa
           subunit), transcript variant 3 (LOC482962), mRNA
          Length = 2121

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  cgcgccgcctgctcctcacc 33
           ||||||||||||||||||||
Sbjct: 86  cgcgccgcctgctcctcacc 105
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>ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation
           specificity factor, 73 kDa subunit (CPSF 73 kDa
           subunit), transcript variant 2 (LOC482962), mRNA
          Length = 1891

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  cgcgccgcctgctcctcacc 33
           ||||||||||||||||||||
Sbjct: 86  cgcgccgcctgctcctcacc 105
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>ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation
           specificity factor, 73 kDa subunit (CPSF 73 kDa
           subunit), transcript variant 1 (LOC482962), mRNA
          Length = 2269

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 14  cgcgccgcctgctcctcacc 33
           ||||||||||||||||||||
Sbjct: 86  cgcgccgcctgctcctcacc 105
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      gccagccgccgccgccacca 88
               ||||||||||||||||||||
Sbjct: 2226634 gccagccgccgccgccacca 2226615
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>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21,
             complete sequence
          Length = 143093

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    ctgccagccgccgccgccaccatc 90
             ||||| ||||||||||||||||||
Sbjct: 13452 ctgcctgccgccgccgccaccatc 13429
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>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11,
              complete sequence
          Length = 132394

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     gccgccgccgccaccatcca 92
              ||||||||||||||||||||
Sbjct: 103129 gccgccgccgccaccatcca 103110
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 63      ggttctgccagccgccgccgccac 86
               ||||||||| ||||||||||||||
Sbjct: 2534579 ggttctgccggccgccgccgccac 2534556
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 67       ctgccagccgccgccgccaccatc 90
                ||||| ||||||||||||||||||
Sbjct: 18797542 ctgcctgccgccgccgccaccatc 18797519



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 73       gccgccgccgccaccatcca 92
                ||||||||||||||||||||
Sbjct: 16442563 gccgccgccgccaccatcca 16442544
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      gccgccgccgccaccatcca 92
               ||||||||||||||||||||
Sbjct: 8497014 gccgccgccgccaccatcca 8496995
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      agccgccgccgccaccatcc 91
               ||||||||||||||||||||
Sbjct: 5265051 agccgccgccgccaccatcc 5265032
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 69       gccagccgccgccgccacca 88
                ||||||||||||||||||||
Sbjct: 22451320 gccagccgccgccgccacca 22451339
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>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21,
              complete sequence
          Length = 160456

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     ctgccagccgccgccgccaccatc 90
              ||||| ||||||||||||||||||
Sbjct: 146705 ctgcctgccgccgccgccaccatc 146682
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>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete
              sequence
          Length = 187610

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 36     caagtcaaagccaagagctaggga 59
              |||||||||||| |||||||||||
Sbjct: 109716 caagtcaaagcctagagctaggga 109739
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>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0015B15
          Length = 123083

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   agccgccgccgccaccatcc 91
            ||||||||||||||||||||
Sbjct: 6563 agccgccgccgccaccatcc 6544
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     agccgccgccgccaccatcc 91
              ||||||||||||||||||||
Sbjct: 131773 agccgccgccgccaccatcc 131754
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446F04
          Length = 175390

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     cagccgccgccgccaccatc 90
              ||||||||||||||||||||
Sbjct: 140095 cagccgccgccgccaccatc 140114
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>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1317D11
          Length = 135043

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cagccgccgccgccaccatc 90
             ||||||||||||||||||||
Sbjct: 29469 cagccgccgccgccaccatc 29488
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>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cagccgccgccgccaccatc 90
             ||||||||||||||||||||
Sbjct: 57230 cagccgccgccgccaccatc 57249
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>dbj|AK111268.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-F09,
          full insert sequence
          Length = 724

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 69 gccagccgccgccgccacca 88
          ||||||||||||||||||||
Sbjct: 38 gccagccgccgccgccacca 57
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>dbj|AK068377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148M09, full
           insert sequence
          Length = 791

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  cagccgccgccgccaccatc 90
           ||||||||||||||||||||
Sbjct: 180 cagccgccgccgccaccatc 199
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>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22,
             complete sequence
          Length = 76145

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tcacagcgcgccgcctgctc 27
             ||||||||||||||||||||
Sbjct: 28184 tcacagcgcgccgcctgctc 28203
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>dbj|AK062807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D07, full
           insert sequence
          Length = 788

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 67  ctgccagccgccgccgccaccatc 90
           ||||| ||||||||||||||||||
Sbjct: 250 ctgcctgccgccgccgccaccatc 227
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>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22,
             complete sequence
          Length = 183103

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tcacagcgcgccgcctgctc 27
             ||||||||||||||||||||
Sbjct: 18290 tcacagcgcgccgcctgctc 18271
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>gb|U01158.1|U01158 Rhodospirillum rubrum nicotinamide nucleotide transhydrogenase
            subunits  alpha 1 (nntA1) alpha 2 (nntA2) and beta (nntB)
            genes, complete cds
          Length = 3671

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 63   ggttctgccagccgccgccgccac 86
            ||||||||| ||||||||||||||
Sbjct: 1609 ggttctgccggccgccgccgccac 1632
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      gccgccgccgccaccatcca 92
               ||||||||||||||||||||
Sbjct: 8496897 gccgccgccgccaccatcca 8496878
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>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146444

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     gccgccgccgccaccatcca 92
              ||||||||||||||||||||
Sbjct: 103677 gccgccgccgccaccatcca 103658
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>gb|U05294.1|RRU05294 Rhodospirillum rubrum S1 proton-translocating nicotinamide nucleotide
             transhydrogenase subunit PntAA (pntAA), PntAB (pntAB),
            and PntB  (pntB) genes, complete cds
          Length = 3160

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 63   ggttctgccagccgccgccgccac 86
            ||||||||| ||||||||||||||
Sbjct: 1366 ggttctgccggccgccgccgccac 1389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,130,750
Number of Sequences: 3902068
Number of extensions: 2130750
Number of successful extensions: 74262
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72894
Number of HSP's gapped (non-prelim): 1368
length of query: 230
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 208
effective length of database: 17,147,199,772
effective search space: 3566617552576
effective search space used: 3566617552576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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