Clone Name | bastl38g09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_602219.2| PREDICTED: Bos taurus similar to collagen, type XXVII, alpha 1 (LOC523908), mRNA Length = 3931 Score = 46.1 bits (23), Expect = 0.043 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgcaagg 60 ||||||||||||||||||||||| Sbjct: 410 gcagcggcggcggcggcgcaagg 432
>gb|M99059.1|XANAVIRU Xanthomonas compestris avirulence protein gene, complete cds Length = 2395 Score = 46.1 bits (23), Expect = 0.043 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgcaa 58 ||||||||||||||||||||||| Sbjct: 141 gcgcagcggcggcggcggcgcaa 119
>ref|XM_423706.1| PREDICTED: Gallus gallus similar to VWF-cleaving protease Adamts-13 (LOC426029), partial mRNA Length = 968 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 aagggaaaccagagagaagcaagaag 36 ||||||||||||||||||| |||||| Sbjct: 860 aagggaaaccagagagaaggaagaag 885
>ref|XM_415435.1| PREDICTED: Gallus gallus similar to von Willebrand factor-cleaving protease precursor (LOC417152), mRNA Length = 4689 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 aagggaaaccagagagaagcaagaag 36 ||||||||||||||||||| |||||| Sbjct: 3396 aagggaaaccagagagaaggaagaag 3421
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 cccagcgcgggcgaaatggcgg 180 |||||||||||||||||||||| Sbjct: 1977288 cccagcgcgggcgaaatggcgg 1977267
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 ggagcacgagctcgacggcgcg 80 |||||||||||||||||||||| Sbjct: 259998 ggagcacgagctcgacggcgcg 259977 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 33272124 gaagcgcggcggcggcggcggcgc 33272101 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aagcgcagcggcggcggcgg 53 |||||||||||||||||||| Sbjct: 1882988 aagcgcagcggcggcggcgg 1883007
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 ggagcacgagctcgacggcgcg 80 |||||||||||||||||||||| Sbjct: 97065 ggagcacgagctcgacggcgcg 97044
>emb|CR391130.1| Gallus gallus finished cDNA, clone ChEST201m24 Length = 965 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 11 aagggaaaccagagagaagcaagaag 36 ||||||||||||||||||| |||||| Sbjct: 417 aagggaaaccagagagaaggaagaag 442
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 ggagcacgagctcgacggcgcg 80 |||||||||||||||||||||| Sbjct: 259998 ggagcacgagctcgacggcgcg 259977 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 33362634 gaagcgcggcggcggcggcggcgc 33362611 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aagcgcagcggcggcggcgg 53 |||||||||||||||||||| Sbjct: 1882986 aagcgcagcggcggcggcgg 1883005
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ggagcacgagctcgacggcgcg 80 |||||||||||||||||||||| Sbjct: 2618 ggagcacgagctcgacggcgcg 2639
>emb|AJ337739.1|HSA337739 Homo sapiens genomic sequence surrounding NotI site, clone NR1-PB10R Length = 857 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 cagcggcggcggcggcgcaagg 60 |||||||||||||||||||||| Sbjct: 311 cagcggcggcggcggcgcaagg 332
>gb|AC145448.3| Dasypus novemcinctus clone VMRC5-267J9, complete sequence Length = 149428 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 gaaaccagagagaagcaagaa 35 ||||||||||||||||||||| Sbjct: 111408 gaaaccagagagaagcaagaa 111428
>ref|XM_464577.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3360 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 3250 gcgcagcggcggcggcggcgc 3230
>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0059C14, complete sequence Length = 142138 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagga 61 ||||||||||||||||||||| Sbjct: 26566 gcggcggcggcggcgcaagga 26546
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 cccacctctcccttcgctcct 157 ||||||||||||||||||||| Sbjct: 35739 cccacctctcccttcgctcct 35719
>ref|XM_593664.2| PREDICTED: Bos taurus similar to Zinc finger CCCH-type domain containing protein 3 (LOC515615), mRNA Length = 2565 Score = 42.1 bits (21), Expect = 0.68 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgcaaggag 62 |||||||||||||||||| |||||| Sbjct: 2055 gcagcggcggcggcggcggaaggag 2079
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 agcgcagcggcggcggcggcg 55 ||||||||||||||||||||| Sbjct: 357588 agcgcagcggcggcggcggcg 357608
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 7785052 gcgcagcggcggcggcggcgc 7785032 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcggcggcggcgcaaggagc 63 |||||||||||||||||||| Sbjct: 26939927 gcggcggcggcgcaaggagc 26939908
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagga 61 ||||||||||||||||||||| Sbjct: 8727795 gcggcggcggcggcgcaagga 8727775
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 agcgcagcggcggcggcggcg 55 ||||||||||||||||||||| Sbjct: 19447562 agcgcagcggcggcggcggcg 19447542
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 6088311 gcgcagcggcggcggcggcgc 6088291 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 29815674 gcggcggcggcggcgcaagg 29815655 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 15711671 gcagcggcggcggcggcgca 15711652
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 agcgcagcggcggcggcggcg 55 ||||||||||||||||||||| Sbjct: 137100 agcgcagcggcggcggcggcg 137080
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 53793 gcgcagcggcggcggcggcgc 53773
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 109150 gcgcagcggcggcggcggcgc 109130
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cgcagcggcggcggcggcgca 57 ||||||||||||||||||||| Sbjct: 776338 cgcagcggcggcggcggcgca 776358
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Minus Query: 74 cggcgcgaggagctccaactcgacggcgc 102 |||||||||||||| || ||||||||||| Sbjct: 2512112 cggcgcgaggagctgcacctcgacggcgc 2512084
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagga 61 ||||||||||||||||||||| Sbjct: 8798558 gcggcggcggcggcgcaagga 8798538
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 7784933 gcgcagcggcggcggcggcgc 7784913 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcggcggcggcgcaaggagc 63 |||||||||||||||||||| Sbjct: 26868097 gcggcggcggcgcaaggagc 26868078
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcgc 56 ||||||||||||||||||||| Sbjct: 84043 gcgcagcggcggcggcggcgc 84023
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aagcgcagcggcggcggcgg 53 |||||||||||||||||||| Sbjct: 107850 aagcgcagcggcggcggcgg 107869
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 2.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 28 agcaagaagcgcagcggcggcggcggcg 55 ||||||||| |||||||||||||||||| Sbjct: 1687 agcaagaag-gcagcggcggcggcggcg 1661
>ref|XM_469998.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1514 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 38 gaagcgcggcggcggcggcggcgc 61
>ref|NM_196272.1| Oryza sativa (japonica cultivar-group) Red chlorophyll catabolite reductase (OSJNBa0094J09.24), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 392 cgcagcggcggcggcggcgc 411
>ref|NM_190638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2910 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 1824 gcgcagcggcggcggcggcg 1843
>ref|NM_193617.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 102 cgcagcggcggcggcggcgc 83
>ref|XM_515409.1| PREDICTED: Pan troglodytes LOC459155 (LOC459155), mRNA Length = 1294 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 120 gcagcggcggcggcggcgca 139
>ref|NM_019842.2| Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 5 (KCNQ5), mRNA Length = 3325 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 145 gcgcagcggcggcggcggcg 164
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 39582 gcggcggcggcggcgcaagg 39601
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 gcaagaagcgcagcggcggcggcg 52 |||||||||||||||||| ||||| Sbjct: 1319214 gcaagaagcgcagcggcgccggcg 1319237
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 96474 gcggcggcggcggcgcaagg 96455
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 139946 cgcagcggcggcggcggcgc 139965
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 163385 cgcagcggcggcggcggcgc 163366
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 3187763 gcgcagcggcggcggcggcg 3187744
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 146354 gcggcggcggcggcgcaagg 146373
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcggcggcggcgcaaggagc 63 |||||||||||||||||||| Sbjct: 64894 gcggcggcggcgcaaggagc 64875
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 633097 gcggcggcggcggcgcaagg 633116
>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence Length = 153520 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 38442 gcgcagcggcggcggcggcg 38461
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 40.1 bits (20), Expect = 2.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 28 agcaagaagcgcagcggcggcggcggcg 55 ||||||||| |||||||||||||||||| Sbjct: 65649 agcaagaag-gcagcggcggcggcggcg 65623
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 51270 gcggcggcggcggcgcaagg 51251
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aagcgcagcggcggcggcgg 53 |||||||||||||||||||| Sbjct: 3758780 aagcgcagcggcggcggcgg 3758799
>ref|NM_053024.3| Homo sapiens profilin 2 (PFN2), transcript variant 1, mRNA Length = 2117 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 54 gcgcagcggcggcggcggcg 35
>ref|NM_002628.4| Homo sapiens profilin 2 (PFN2), transcript variant 2, mRNA Length = 1795 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 54 gcgcagcggcggcggcggcg 35
>ref|NM_001012376.1| Danio rerio isthmin 1 (ism1), mRNA Length = 2776 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 663 gcagcggcggcggcggcgca 682
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 28640 gaagcgcggcggcggcggcggcgc 28617
>ref|XM_916631.2| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2889 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 257 gcagcggcggcggcggcgca 238
>ref|XM_355952.4| PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 293 gcagcggcggcggcggcgca 274
>gb|AY203946.1| Homo sapiens LP7097 mRNA, complete cds Length = 2141 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 184 gcgcagcggcggcggcggcg 203
>ref|XM_756391.1| Ustilago maydis 521 hypothetical protein (UM05337.1) partial mRNA Length = 3624 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgcaaggagcacgagc 69 |||||||||||||||||| ||||||| |||| Sbjct: 938 gcagcggcggcggcggcgggaggagcaggagc 907
>ref|XM_385771.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05595.1) partial mRNA Length = 1446 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 450 cgcagcggcggcggcggcgc 431
>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence Length = 152908 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 66786 gcagcggcggcggcggcgca 66767
>gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosome 18, complete sequence Length = 161461 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 33636 gcgcagcggcggcggcggcg 33655
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cctctcccttcgctccttcc 160 |||||||||||||||||||| Sbjct: 143114 cctctcccttcgctccttcc 143133
>gb|AF067214.1| Caenorhabditis elegans cosmid F56C3, complete sequence Length = 38090 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cagcggcggcggcggcgcaa 58 |||||||||||||||||||| Sbjct: 27605 cagcggcggcggcggcgcaa 27586
>gb|AC006604.2| Caenorhabditis elegans cosmid C07F11, complete sequence Length = 41061 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gctcgacggcgcgaggagctccaa 91 |||||||||| ||||||||||||| Sbjct: 34949 gctcgacggctcgaggagctccaa 34926
>ref|NM_199141.1| Homo sapiens coactivator-associated arginine methyltransferase 1 (CARM1), mRNA Length = 2968 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 86 gcgcagcggcggcggcggcg 105
>emb|AL445705.8| Human DNA sequence from clone RP5-996C2 on chromosome 20 Contains part of a novel gene (KIAA0964), complete sequence Length = 57930 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ggagaagggaaaccagagag 26 |||||||||||||||||||| Sbjct: 11330 ggagaagggaaaccagagag 11349
>emb|AL445569.1| Human DNA sequence from clone RP11-135M8 on chromosome 6 Contains the 5' end of the KCNQ5 gene for potassium voltage-gated channel, KQT-like subfamily member 5, the 5' parts of two novel genes and a CpG island, complete sequence Length = 47057 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 4377 gcgcagcggcggcggcggcg 4396
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gcggcggcggcgcaaggagc 63 |||||||||||||||||||| Sbjct: 3630 gcggcggcggcgcaaggagc 3649
>emb|AL121789.38|HSJ493H23 Human DNA sequence from clone RP3-493H23 on chromosome 6q26-27 Contains the 5' end of the PDE10A gene for phosphodiesterase 10A and a CpG island, complete sequence Length = 74227 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 67736 gcgcagcggcggcggcggcg 67717
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 48803 gaagcgcggcggcggcggcggcgc 48826
>emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on chromosome Xq22.1-23 Contains a pseudogene similar to part of keratin 18 (K18, CYK18) (KRT18), a novel gene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 146358 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 45816 gcgcagcggcggcggcggcg 45797
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aagcgcagcggcggcggcgg 53 |||||||||||||||||||| Sbjct: 92423 aagcgcagcggcggcggcgg 92404
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 602028 gcgcagcggcggcggcggcg 602047
>gb|BC043646.1| Homo sapiens profilin 2, transcript variant 1, mRNA (cDNA clone MGC:43904 IMAGE:5274799), complete cds Length = 2276 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 211 gcgcagcggcggcggcggcg 192
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 gcaagaagcgcagcggcggcggcg 52 ||||| |||||||||||||||||| Sbjct: 235104 gcaagcagcgcagcggcggcggcg 235081
>gb|BC018049.1| Homo sapiens profilin 2, transcript variant 1, mRNA (cDNA clone MGC:26377 IMAGE:4796198), complete cds Length = 2087 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 22 gcgcagcggcggcggcggcg 3
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 67298 gcggcggcggcggcgcaagg 67317
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccactgccgtcccc 139 |||||||||||||||||||| Sbjct: 59005 ccgccgccactgccgtcccc 58986
>emb|AJ720596.1| Gallus gallus mRNA for hypothetical protein, clone 20p3 Length = 981 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcg 52 |||||||||||||||||||| Sbjct: 51 gaagcgcagcggcggcggcg 70
>ref|NM_001006183.1| Gallus gallus RAN binding protein 1 (RANBP1), mRNA Length = 981 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcg 52 |||||||||||||||||||| Sbjct: 51 gaagcgcagcggcggcggcg 70
>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 107540 gcgcagcggcggcggcggcg 107559
>ref|NM_001038063.1| Bos taurus transmembrane and coiled-coil domain family 3 (TMCC3), mRNA Length = 2711 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 51 gcagcggcggcggcggcgca 70
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 3350211 gcgcagcggcggcggcggcg 3350230
>dbj|AB232152.2| Chlamydomonas reinhardtii DHC9 mRNA for dynein heavy chain 9, complete cds Length = 13205 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 663 gcgcagcggcggcggcggcg 682
>emb|CR601974.1| full-length cDNA clone CS0DE004YH21 of Placenta of Homo sapiens (human) Length = 1726 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 27 gcgcagcggcggcggcggcg 8
>ref|NM_004472.2| Homo sapiens forkhead box D1 (FOXD1), mRNA Length = 2272 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 313 gcgcagcggcggcggcggcg 332
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05, complete sequence Length = 175061 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 5444 gcggcggcggcggcgcaagg 5425
>dbj|AK141632.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630047J12 product:hypothetical protein, full insert sequence Length = 3424 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 67 gcgcagcggcggcggcggcg 48
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 106908 gcgcagcggcggcggcggcg 106889
>gb|AF348166.1|AF348166 Caenorhabditis elegans Toll-like receptor TOL-1 mRNA, complete cds Length = 4077 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gctcgacggcgcgaggagctccaa 91 |||||||||| ||||||||||||| Sbjct: 1232 gctcgacggctcgaggagctccaa 1209
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 cggcggcgcaaggagcacgagctc 71 ||||||||||||||||| |||||| Sbjct: 213182 cggcggcgcaaggagcaggagctc 213205
>gb|BC111266.1| Bos taurus cDNA clone MGC:134558 IMAGE:8061715, complete cds Length = 2711 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 51 gcagcggcggcggcggcgca 70
>ref|NM_001025812.1| Caenorhabditis elegans TOLl (Drosophila) family member (tol-1) (tol-1) mRNA, complete cds Length = 4062 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gctcgacggcgcgaggagctccaa 91 |||||||||| ||||||||||||| Sbjct: 1210 gctcgacggctcgaggagctccaa 1187
>tpg|BK000307.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M29, complete sequence Length = 1222 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 499 gcgcagcggcggcggcggcg 518
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 33295037 gcggcggcggcggcgcaagg 33295056 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccactgccgtcccc 139 |||||||||||||||||||| Sbjct: 15872440 ccgccgccactgccgtcccc 15872421
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 12364229 cgcagcggcggcggcggcgc 12364210 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 3233599 gcggcggcggcggcgcaagg 3233580 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 3018486 gcgcagcggcggcggcggcg 3018467
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 2.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 28 agcaagaagcgcagcggcggcggcggcg 55 ||||||||| |||||||||||||||||| Sbjct: 19282433 agcaagaag-gcagcggcggcggcggcg 19282407
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 6499036 gcggcggcggcggcgcaagg 6499017 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 1956557 gcggcggcggcggcgcaagg 1956576
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 24855030 gcggcggcggcggcgcaagg 24855011
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 13367807 gcggcggcggcggcgcaagg 13367788 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 3052338 gcggcggcggcggcgcaagg 3052357
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 41204192 gaagcgccgcggcggcggcggcgc 41204215 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 36690399 gcgcagcggcggcggcggcg 36690380 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 22142747 cgcagcggcggcggcggcgc 22142728
>gb|AC020658.6|AC020658 Homo sapiens chromosome 15 clone RP11-133K1 map 15q14, complete sequence Length = 159007 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 120407 cgcagcggcggcggcggcgc 120426
>dbj|AB041798.2| Homo sapiens HSPDE10A gene for phosphodiesterase 10A1 (PDE10A1), phosphodiesterase 10A7 (PDE10A7), partial cds Length = 19594 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 432 gcgcagcggcggcggcggcg 451
>gb|AC099522.3| Homo sapiens chromosome 5 clone RP11-79P5, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 71964 gcgcagcggcggcggcggcg 71983
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 21107 gaagcgccgcggcggcggcggcgc 21130
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 101247 gaagcgccgcggcggcggcggcgc 101270
>gb|AF249278.1|AF249278 Homo sapiens voltage-gated potassium channel (KCNQ5) mRNA, complete cds Length = 3074 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 171 gcgcagcggcggcggcggcg 190
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 163665 gcgcagcggcggcggcggcg 163646
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 16714 gcgcagcggcggcggcggcg 16695
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 72019 gcggcggcggcggcgcaagg 72000
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 38233 cgcagcggcggcggcggcgc 38214
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 66113 gcggcggcggcggcgcaagg 66094
>dbj|AP005514.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0035A24 Length = 176446 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 120358 gcagcggcggcggcggcgca 120339
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 81755 gcggcggcggcggcgcaagg 81774
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0509D04 Length = 140666 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 105592 gcggcggcggcggcgcaagg 105611
>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence Length = 29585 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 14801 gcggcggcggcggcgcaagg 14782
>dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086M15 Length = 153491 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 80511 gcggcggcggcggcgcaagg 80492
>dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K11, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcggcggcggcgcaaggagc 63 |||||||||||||||||||| Sbjct: 63 gcggcggcggcgcaaggagc 44
>emb|AJ427979.1|OSA427979 Oryza sativa HAK10 gene for putative potasium transporter, exons 1-9 Length = 5051 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 4212 gcggcggcggcggcgcaagg 4231
>emb|AJ427972.1|OSA427972 Oryza sativa mRNA for putative potasium transporter (HAK10 gene) Length = 2532 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 2189 gcggcggcggcggcgcaagg 2208
>emb|X15289.1|HVDHN9 Barley mRNA for dehydrin (dhn9) Length = 683 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 184 cgcagcggcggcggcggcgc 165
>dbj|AK107132.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C06, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 1214 gcggcggcggcggcgcaagg 1233
>dbj|AK106099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C04, full insert sequence Length = 1513 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 38 gaagcgcggcggcggcggcggcgc 61
>dbj|AK105284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-E05, full insert sequence Length = 2274 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 58 gcggcggcggcggcgcaagg 77
>dbj|AK104353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G12, full insert sequence Length = 1513 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 38 gaagcgcggcggcggcggcggcgc 61
>dbj|AK071125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082K03, full insert sequence Length = 1114 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 55 gcggcggcggcggcgcaagg 36
>ref|NM_207819.1| Eremothecium gossypii AAL076Wp (AAL076W), mRNA Length = 345 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 cggcggcgcaaggagcacgagctc 71 ||||||||||||||||| |||||| Sbjct: 139 cggcggcgcaaggagcaggagctc 162
>dbj|AK067295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106J21, full insert sequence Length = 1548 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gaagcgcagcggcggcggcggcgc 56 ||||||| |||||||||||||||| Sbjct: 67 gaagcgcggcggcggcggcggcgc 90
>dbj|AK064858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H13, full insert sequence Length = 2441 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgcaagg 60 ||||||||||||||||||| |||| Sbjct: 157 cgcagcggcggcggcggcggaagg 134
>gb|AF160731.1|AF160731 Oryza officinalis repetitive sequence Length = 879 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 279 cgcagcggcggcggcggcgc 298
>gb|AC007565.1|AC007565 Homo sapiens chromosome 19, cosmid R27656, complete sequence Length = 42030 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 30908 gcgcagcggcggcggcggcg 30927
>gb|AF043088.1|AF043088 Hordeum vulgare dehydrin 2 (dhn2) gene, complete cds Length = 1849 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 790 cgcagcggcggcggcggcgc 771
>gb|AY884208.1| Danio rerio isthmin mRNA, complete cds Length = 2776 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gcagcggcggcggcggcgca 57 |||||||||||||||||||| Sbjct: 663 gcagcggcggcggcggcgca 682
>gb|U59832.1|HSU59832 Human transcription factor, forkhead related activator 4 (FREAC-4) mRNA, complete cds Length = 2272 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 313 gcgcagcggcggcggcggcg 332
>gb|U59831.1|HSU59831 Human transcription factor, forkhead related activator 4 (FREAC-4) gene, complete cds Length = 5181 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 2833 gcgcagcggcggcggcggcg 2852
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cgcagcggcggcggcggcgc 56 |||||||||||||||||||| Sbjct: 12371569 cgcagcggcggcggcggcgc 12371550 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gcggcggcggcggcgcaagg 60 |||||||||||||||||||| Sbjct: 3233520 gcggcggcggcggcgcaagg 3233501 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 3018407 gcgcagcggcggcggcggcg 3018388
>gb|BC050689.1| Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 5, mRNA (cDNA clone IMAGE:6137109), complete cds Length = 1508 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcgcagcggcggcggcggcg 55 |||||||||||||||||||| Sbjct: 146 gcgcagcggcggcggcggcg 165 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,284,169 Number of Sequences: 3902068 Number of extensions: 2284169 Number of successful extensions: 444932 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 417840 Number of HSP's gapped (non-prelim): 26942 length of query: 211 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 189 effective length of database: 17,147,199,772 effective search space: 3240820756908 effective search space used: 3240820756908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)