ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CVCA_PEA (P13915) Convicilin precursor 30 1.9
2CVCB_PEA (P13919) Convicilin precursor (Fragment) 30 3.2
3GLND_AZOBR (Q8RQD1) [Protein-PII] uridylyltransferase (EC 2.7.7.... 29 5.4
4MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW an... 28 9.2
5K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, compo... 28 9.2
6MAGI1_HUMAN (Q96QZ7) Membrane-associated guanylate kinase, WW an... 28 9.2
7NPY6R_RABIT (P79217) Neuropeptide Y receptor type 6 (NPY6-R) 28 9.2

>CVCA_PEA (P13915) Convicilin precursor|
          Length = 571

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 156 QREGPQRCRGLNGEQRAAATERREWRGGIAEEKSSTGCLFRAPFLF 19
           +RE P+    L   +     +RR  R G  EE+SS     R PFLF
Sbjct: 112 RREDPEERARLRHREERTKRDRRHQREGEEEERSSESQEHRNPFLF 157



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>CVCB_PEA (P13919) Convicilin precursor (Fragment)|
          Length = 386

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 156 QREGPQRCRGLNGEQRAAATERREWRGGIAEEKSSTGCLFRAPFLF 19
           +RE P+    L   +     +RR  R G  EE+SS     R PFLF
Sbjct: 160 RREDPEERARLRHREERTKRDRRHQREGEEEERSSESQERRNPFLF 205



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>GLND_AZOBR (Q8RQD1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 933

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 284 KHSFTALQDTGDRTRLLELMINLDARRPP 198
           KH F   +D GD TR+    +  +++RPP
Sbjct: 347 KHYFLVAKDVGDLTRIFCAALEAESKRPP 375



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>MAGI1_MOUSE (Q6RHR9) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 1 (BAI1-associated protein 1)
            (BAP-1) (Membrane-associated guanylate kinase inverted 1)
            (MAGI-1)
          Length = 1471

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 156  QREGPQRCRGLNGEQRAAATERREWR 79
            QR  P+R RG + E+RA +T+RR  R
Sbjct: 1389 QRRSPERRRGGSPERRAKSTDRRRAR 1414



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>K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, component 8C-1|
           (Low-sulfur keratin)
          Length = 412

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 71  IPPLHSLLSVAAARCSPLSPRHRCGP 148
           I P  S     AA C+P  PR RCGP
Sbjct: 381 ITPCISSPCAPAAPCTPCVPRSRCGP 406



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>MAGI1_HUMAN (Q96QZ7) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 1 (BAI1-associated protein 1)
            (BAP-1) (Membrane-associated guanylate kinase inverted 1)
            (MAGI-1) (Atrophin-1-interacting protein 3) (AIP3) (WW
            domain-containi
          Length = 1491

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 156  QREGPQRCRGLNGEQRAAATERREWR 79
            QR  P+R RG + E+RA +T+RR  R
Sbjct: 1409 QRRSPERRRGGSPERRAKSTDRRRAR 1434



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>NPY6R_RABIT (P79217) Neuropeptide Y receptor type 6 (NPY6-R)|
          Length = 371

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -2

Query: 41  YFVPLSFLFVCFL 3
           YFVPL F+F+C+L
Sbjct: 218 YFVPLGFMFICYL 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,524,858
Number of Sequences: 219361
Number of extensions: 1036314
Number of successful extensions: 3000
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2999
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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