Clone Name | bastl38f12 |
---|---|
Clone Library Name | barley_pub |
>I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 Score = 34.7 bits (78), Expect = 0.059 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +2 Query: 254 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVN 358 RPG G G PI+L+ NHF+V + D +HY V+ Sbjct: 18 RPGLGTVGKPIRLLANHFQVQIPKID--VYHYDVD 50
>I2C4_HUMAN (Q9HCK5) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) Length = 861 Score = 34.7 bits (78), Expect = 0.059 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +2 Query: 254 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVN 358 RPG G G PI+L+ NHF+V + D +HY V+ Sbjct: 18 RPGLGTVGKPIRLLANHFQVQIPKID--VYHYDVD 50
>I2C1_MOUSE (Q8CJG1) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Piwi/argonaute family protein meIF2C1) Length = 857 Score = 32.7 bits (73), Expect = 0.22 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 254 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVN 358 RPG G G PI+L+ N+F+V + D +HY V+ Sbjct: 26 RPGIGTVGKPIKLLANYFEVDIPKID--VYHYEVD 58
>I2C1_HUMAN (Q9UL18) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99) Length = 857 Score = 32.7 bits (73), Expect = 0.22 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 254 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVN 358 RPG G G PI+L+ N+F+V + D +HY V+ Sbjct: 26 RPGIGTVGKPIKLLANYFEVDIPKID--VYHYEVD 58
>I2C3_HUMAN (Q9H9G7) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) Length = 860 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 227 SKPRRALIARPGFGKRGNPIQLVTNHFKVSLKTTDEFFH 343 ++P + RPG+G G PI+L+ N F+V + D + + Sbjct: 11 AQPLLMVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLY 49
>I2C3_MOUSE (Q8CJF9) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) (Piwi/argonaute family protein meIF2C3) Length = 860 Score = 31.6 bits (70), Expect = 0.50 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 254 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFH 343 RPG+G G PI+L+ N F+V + D + + Sbjct: 20 RPGYGTMGKPIKLLANCFQVEIPKIDVYLY 49
>YO43_CAEEL (P34681) Hypothetical protein ZK757.3| Length = 1040 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 239 RALIARPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYV 355 R ++ARPG G G I + +N F + LK Y+V Sbjct: 84 REVVARPGLGTIGRQIPVKSNFFAMDLKNPKMVVIQYHV 122
>CRTI_SYNP7 (P26294) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 474 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -3 Query: 342 WKNSSVVFNETLK*LVTSCIGFPLLPKPGRAIRALL 235 WK+ S++FN+ K S FP +P P + A+L Sbjct: 79 WKSHSMIFNQPTKPGTYSRFDFPDIPAPINGVAAIL 114
>Y1775_BACSK (Q5WH45) Hypothetical protein ABC1775| Length = 374 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -1 Query: 137 LVGEVVAVAGHHPQQHATPFGETGNSPEEQNR*TSLESMGTEMQ 6 L+G+++ +AG +P+G G +PEE R +M T+M+ Sbjct: 275 LLGKLLRMAGADAVLFPSPYGRIGINPEEAQRVKDQLTMTTQMK 318 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,790,674 Number of Sequences: 219361 Number of extensions: 792940 Number of successful extensions: 2213 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2213 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)