>gb|AC161571.11| Mus musculus chromosome 7, clone RP23-403M22, complete sequence
          Length = 211052

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   gaggttttcttgggggaagaaagg 159
             ||||||||||||||| ||||||||
Sbjct: 37585 gaggttttcttggggaaagaaagg 37562

>ref|XM_898640.2| PREDICTED: Mus musculus TAO kinase 3, transcript variant 2 (Taok3),
           mRNA
          Length = 838

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 gttttcttgggggaagaaag 158
           ||||||||||||||||||||
Sbjct: 97  gttttcttgggggaagaaag 116

>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    gttttcttgggggaagaaag 158
              ||||||||||||||||||||
Sbjct: 102588 gttttcttgggggaagaaag 102569

>emb|X63841.1|ACNTRYXA A.caulinodans NtrY/NtrX DNA sequence
          Length = 6881

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  ggccgtcgaggcggctgccc 125
            ||||||||||||||||||||
Sbjct: 5253 ggccgtcgaggcggctgccc 5234

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     ggccgtcgaggcggctgccc 125
               ||||||||||||||||||||
Sbjct: 2401949 ggccgtcgaggcggctgccc 2401968

>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence
          Length = 185807

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 136   gaggttttcttgggggaag 154
             |||||||||||||||||||
Sbjct: 58778 gaggttttcttgggggaag 58760

>gb|AY572455.1| Mus musculus transcriptional intermediary factor 1 delta short
            isoform (Tif1d) mRNA, complete cds, alternatively spliced
          Length = 4374

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  tcttgggggaagaaaggtc 161
            |||||||||||||||||||
Sbjct: 3276 tcttgggggaagaaaggtc 3294

>gb|AY572454.1| Mus musculus transcriptional intermediary factor 1 delta (Tif1d)
            mRNA, complete cds, alternatively spliced
          Length = 4437

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  tcttgggggaagaaaggtc 161
            |||||||||||||||||||
Sbjct: 3339 tcttgggggaagaaaggtc 3357

>gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0079P23, complete sequence
          Length = 125090

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 147   gggggaagaaaggtcggggtttt 169
             ||||||||||||| |||||||||
Sbjct: 15576 gggggaagaaaggccggggtttt 15554

>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence
          Length = 82435

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 140  ttttcttgggggaagaaag 158
            |||||||||||||||||||
Sbjct: 6175 ttttcttgggggaagaaag 6193

>gb|AC124457.4| Mus musculus BAC clone RP24-134O20 from chromosome 7, complete sequence
          Length = 166862

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 143   tcttgggggaagaaaggtc 161
             |||||||||||||||||||
Sbjct: 64377 tcttgggggaagaaaggtc 64359

>gb|AC144760.27| Medicago truncatula clone mth2-8p15, complete sequence
          Length = 108569

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 137 aggttttcttgggggaaga 155
           |||||||||||||||||||
Sbjct: 917 aggttttcttgggggaaga 935

>emb|AL136306.11| Human DNA sequence from clone RP3-334F4 on chromosome 6 Contains a
             LAMR1 (laminin receptor 1, ribosomal protein SA)
             pseudogene and an RPL10 (ribosomal protein L10)
             pseudogene, complete sequence
          Length = 101765

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 142   ttcttgggggaagaaaggt 160
             |||||||||||||||||||
Sbjct: 98884 ttcttgggggaagaaaggt 98866

>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete
             sequence
          Length = 219717

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 140   ttttcttgggggaagaaag 158
             |||||||||||||||||||
Sbjct: 54135 ttttcttgggggaagaaag 54153

>emb|AJ307670.1|MMU307670 Mus musculus St5 gene, L27a gene and Kiaa0298 gene
          Length = 202748

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    tcttgggggaagaaaggtc 161
              |||||||||||||||||||
Sbjct: 191507 tcttgggggaagaaaggtc 191525

>dbj|AK128056.1| Homo sapiens cDNA FLJ46176 fis, clone TESTI4003733
          Length = 4166

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 105  cggccgtcgaggcggctgc 123
            |||||||||||||||||||
Sbjct: 2281 cggccgtcgaggcggctgc 2263

>gb|AE005699.1| Caulobacter crescentus CB15 section 25 of 359 of the complete genome
          Length = 10791

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  cccggccgtcgaggcggct 121
            |||||||||||||||||||
Sbjct: 1457 cccggccgtcgaggcggct 1439

>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence
          Length = 218652

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    aggttttcttgggggaaga 155
              |||||||||||||||||||
Sbjct: 101556 aggttttcttgggggaaga 101538

>dbj|AK147559.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1079C19
            product:Hypothetical protein KIAA0298 homolog [Mus
            musculus], full insert sequence
          Length = 9251

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  tcttgggggaagaaaggtc 161
            |||||||||||||||||||
Sbjct: 3378 tcttgggggaagaaaggtc 3396

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 147      gggggaagaaaggtcggggtttt 169
                ||||||||||||| |||||||||
Sbjct: 25076541 gggggaagaaaggccggggtttt 25076519

>gb|AC125611.4| Homo sapiens 12 BAC RP11-161H23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194578

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    cggccgtcgaggcggctgc 123
              |||||||||||||||||||
Sbjct: 151782 cggccgtcgaggcggctgc 151764

>gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complete sequence
          Length = 124950

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    gttttcttgggggaagaaa 157
              |||||||||||||||||||
Sbjct: 100102 gttttcttgggggaagaaa 100120

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 140     ttttcttgggggaagaaag 158
               |||||||||||||||||||
Sbjct: 2072540 ttttcttgggggaagaaag 2072522

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 147      gggggaagaaaggtcggggtttt 169
                ||||||||||||| |||||||||
Sbjct: 25388131 gggggaagaaaggccggggtttt 25388109

>ref|NM_181853.2| Mus musculus tripartite motif-containing 66 (Trim66), mRNA
          Length = 9229

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  tcttgggggaagaaaggtc 161
            |||||||||||||||||||
Sbjct: 3378 tcttgggggaagaaaggtc 3396

>dbj|AP004905.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06B17, TM0064a,
           complete sequence
          Length = 14870

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 133 ggggaggttttcttgggggaaga 155
           |||||||||||||| ||||||||
Sbjct: 765 ggggaggttttctttggggaaga 787


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 577,232
Number of Sequences: 3902068
Number of extensions: 577232
Number of successful extensions: 43915
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43812
Number of HSP's gapped (non-prelim): 103
length of query: 178
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 156
effective length of database: 17,147,199,772
effective search space: 2674963164432
effective search space used: 2674963164432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)