ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 333 bits (168), Expect = 3e-88 Identities = 210/224 (93%) Strand = Plus / Minus Query: 189 agaagcccgagcccgtcaccatccacggggagacgtggcacgacagctacgcctggatgg 248 ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 16969409 agaagcccgagccggtctccatccacggggagacgtggcacgacagctacgcgtggatgg 16969350 Query: 249 gctcgctctccgacgccgccgccatgcgccacatggacatccacatggaggccgaggaga 308 || | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 16969349 gcgccctctccgacgccgccgccatgcgccacatggacgtgcacatggaggccgaggaga 16969290 Query: 309 agtacgccgaggcctgcctcgccgccgccggcgctgaccggctcgcccgcaagctccagc 368 ||||||||||||||||||||||||| || ||||| ||||| ||||| || |||||||||| Sbjct: 16969289 agtacgccgaggcctgcctcgccgcggcgggcgccgaccgcctcgcgcggaagctccagc 16969230 Query: 369 tcgagatggcctcccgccttgcctccgacgcctgcacgccgccc 412 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 16969229 tcgagatggcctcccgcctcgcctccgacgcctgcacgccgccc 16969186 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 51 cgccaccgccgacggcgaccatgcgccgtcatctcgacctgctcccccgcctcctcctcc 110 |||| ||| |||| ||||||||||||| || | | ||| ||| ||||||||||||||| Sbjct: 16969547 cgccgccggcgaccgcgaccatgcgccaccaggtaggccttctctcccgcctcctcctcc 16969488 Query: 111 gtcgccacgtccaccgccgc 130 | |||||||| ||||||||| Sbjct: 16969487 ggcgccacgtacaccgccgc 16969468 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 gcctcgccgccgccggcgctg 344 ||||||||||||||||||||| Sbjct: 19454758 gcctcgccgccgccggcgctg 19454778 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 6511709 gccgccaccgccgacggcgac 6511689
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 333 bits (168), Expect = 3e-88 Identities = 210/224 (93%) Strand = Plus / Minus Query: 189 agaagcccgagcccgtcaccatccacggggagacgtggcacgacagctacgcctggatgg 248 ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99222 agaagcccgagccggtctccatccacggggagacgtggcacgacagctacgcgtggatgg 99163 Query: 249 gctcgctctccgacgccgccgccatgcgccacatggacatccacatggaggccgaggaga 308 || | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 99162 gcgccctctccgacgccgccgccatgcgccacatggacgtgcacatggaggccgaggaga 99103 Query: 309 agtacgccgaggcctgcctcgccgccgccggcgctgaccggctcgcccgcaagctccagc 368 ||||||||||||||||||||||||| || ||||| ||||| ||||| || |||||||||| Sbjct: 99102 agtacgccgaggcctgcctcgccgcggcgggcgccgaccgcctcgcgcggaagctccagc 99043 Query: 369 tcgagatggcctcccgccttgcctccgacgcctgcacgccgccc 412 ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 99042 tcgagatggcctcccgcctcgcctccgacgcctgcacgccgccc 98999 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 51 cgccaccgccgacggcgaccatgcgccgtcatctcgacctgctcccccgcctcctcctcc 110 |||| ||| |||| ||||||||||||| || | | ||| ||| ||||||||||||||| Sbjct: 99360 cgccgccggcgaccgcgaccatgcgccaccaggtaggccttctctcccgcctcctcctcc 99301 Query: 111 gtcgccacgtccaccgccgc 130 | |||||||| ||||||||| Sbjct: 99300 ggcgccacgtacaccgccgc 99281
>ref|XM_364070.1| Magnaporthe grisea 70-15 hypothetical protein (MG08915.4) partial mRNA Length = 2520 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Plus Query: 374 atggcctcccgccttgcctccgacgcc 400 |||||||||||||||||| |||||||| Sbjct: 1975 atggcctcccgccttgccaccgacgcc 2001
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgacca 71 ||||||||||||||||||||||| Sbjct: 2833810 gccgccaccgccgacggcgacca 2833788
>gb|BT023936.1| Drosophila melanogaster RE06859 full insert cDNA Length = 3998 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 627 ccgcctcctcctccgccgccgcctccaccgccgc 594
>ref|XM_479565.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2039 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 gctcccccgcctcctcctccgtcgcc 116 ||||||||||||||||||||| |||| Sbjct: 470 gctcccccgcctcctcctccgccgcc 495
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 ggctcgctctccgacgccgccg 269 |||||||||||||||||||||| Sbjct: 45613 ggctcgctctccgacgccgccg 45592 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccg 269 |||||||||||||||||||||| Sbjct: 18639 ggctcgctctccgacgccgccg 18660
>gb|DQ017435.1| Drosophila melanogaster strain Oregon R CG10002 gene, promoter region and partial cds Length = 2013 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 1968 ccgcctcctcctccgccgccgcctccaccgccgc 1935
>gb|DQ017434.1| Drosophila melanogaster strain Russian 2b CG10002 gene, promoter region and partial cds Length = 2014 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 1969 ccgcctcctcctccgccgccgcctccaccgccgc 1936
>gb|BT010029.1| Drosophila melanogaster RE03865 full insert cDNA Length = 3266 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 646 ccgcctcctcctccgccgccgcctccaccgccgc 613
>ref|NM_079818.2| Drosophila melanogaster fork head CG10002-RA (fkh), mRNA Length = 3268 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 646 ccgcctcctcctccgccgccgcctccaccgccgc 613
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 gctcccccgcctcctcctccgtcgcc 116 ||||||||||||||||||||| |||| Sbjct: 28910032 gctcccccgcctcctcctccgccgcc 28910057
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 ggctcgctctccgacgccgccg 269 |||||||||||||||||||||| Sbjct: 5131110 ggctcgctctccgacgccgccg 5131089 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccg 269 |||||||||||||||||||||| Sbjct: 5104136 ggctcgctctccgacgccgccg 5104157
>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone BACR09F18, complete sequence Length = 182525 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 124082 ccgcctcctcctccgccgccgcctccaccgccgc 124115
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 cgccgaggcctgcctcgccgccgccg 338 ||||| |||||||||||||||||||| Sbjct: 422033 cgccgtggcctgcctcgccgccgccg 422058 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ctcgctctccgacgccgccg 269 |||||||||||||||||||| Sbjct: 5853729 ctcgctctccgacgccgccg 5853748
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 gctcccccgcctcctcctccgtcgcc 116 ||||||||||||||||||||| |||| Sbjct: 27569 gctcccccgcctcctcctccgccgcc 27594
>dbj|AK066262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O11, full insert sequence Length = 2038 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 gctcccccgcctcctcctccgtcgcc 116 ||||||||||||||||||||| |||| Sbjct: 469 gctcccccgcctcctcctccgccgcc 494
>gb|AE003766.2| Drosophila melanogaster chromosome 3R, section 104 of 118 of the complete sequence Length = 232302 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 15472 ccgcctcctcctccgccgccgcctccaccgccgc 15505
>gb|J03177.1|DROFKH D.melanogaster fork head protein (fkh) gene, complete cds Length = 5712 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 97 ccgcctcctcctccgtcgccacgtccaccgccgc 130 ||||||||||||||| |||| | ||||||||||| Sbjct: 2100 ccgcctcctcctccgccgccgcctccaccgccgc 2067
>ref|XM_482152.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgccacgt 120 |||||||||||||||| |||||||| Sbjct: 26 cccgcctcctcctccggcgccacgt 50
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccagccgccaccgccgacggcgac 69 |||||||||||||||||||| |||| Sbjct: 131 gccagccgccaccgccgacgccgac 155
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0094K23, complete sequence Length = 167482 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 gcctcgccgccgccggcgctg 344 ||||||||||||||||||||| Sbjct: 50165 gcctcgccgccgccggcgctg 50185
>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene cluster, complete sequence Length = 38146 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cgccaccgccgacggcgacca 71 ||||||||||||||||||||| Sbjct: 15623 cgccaccgccgacggcgacca 15603
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccagccgccaccgccgacggcgac 69 |||||||||||||||||||| |||| Sbjct: 67317 gccagccgccaccgccgacgccgac 67341
>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster Length = 32668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cgccaccgccgacggcgacca 71 ||||||||||||||||||||| Sbjct: 20879 cgccaccgccgacggcgacca 20899
>gb|AC011451.6| Homo sapiens chromosome 19 clone CTC-325H20, complete sequence Length = 180672 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ctcccccgcctcctcctccgt 112 ||||||||||||||||||||| Sbjct: 148025 ctcccccgcctcctcctccgt 148005
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 cctgcctcgccgccgccggcg 341 ||||||||||||||||||||| Sbjct: 1856517 cctgcctcgccgccgccggcg 1856537
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccagccgccaccgccgacggcgac 69 |||||||||||||||||||| |||| Sbjct: 31085236 gccagccgccaccgccgacgccgac 31085260 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 31508397 ctgcctcgccgccgccggcg 31508378 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggcctgcctcgccgccgccg 338 |||||||||||||||||||| Sbjct: 23618686 ggcctgcctcgccgccgccg 23618705
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 27363159 gccgccaccgccgacggcgac 27363179 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccgccaccgccgacggcgac 69 |||||||||||||||||||| Sbjct: 25532599 ccgccaccgccgacggcgac 25532580
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 60 cgacggcgaccatgcgccgtcatctcgacctgctcccccgcctcctcctccgtcgccacg 119 |||| ||||||||||||| || | | ||| ||| |||||||||||||||| ||||||| Sbjct: 18217365 cgacagcgaccatgcgccaccaggtaggccttctctcccgcctcctcctccggcgccacg 18217306 Query: 120 t 120 | Sbjct: 18217305 t 18217305 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gacgccgccgccatgcgcca 279 |||||||||||||||||||| Sbjct: 2938783 gacgccgccgccatgcgcca 2938802
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 5745810 gccgccaccgccgacggcgac 5745790 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccgcc 271 ||||||||||||| |||||||||| Sbjct: 24964910 ggctcgctctccgccgccgccgcc 24964933 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 23706434 ctgcctcgccgccgccggcg 23706415
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cgacctgctcccccgcctcct 105 ||||||||||||||||||||| Sbjct: 781353 cgacctgctcccccgcctcct 781333 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ggctcgctctccgacgccgccgcc 271 ||||||||| |||||||||||||| Sbjct: 3418576 ggctcgctcaccgacgccgccgcc 3418553
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 61339 gccgccaccgccgacggcgac 61319
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 137957 gccgccaccgccgacggcgac 137937
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcgac 69 ||||||||||||||||||||| Sbjct: 10379 gccgccaccgccgacggcgac 10359
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 60 cgacggcgaccatgcgccgtcatctcgacctgctcccccgcctcctcctccgtcgccacg 119 |||| ||||||||||||| || | | ||| ||| |||||||||||||||| ||||||| Sbjct: 39677 cgacagcgaccatgcgccaccaggtaggccttctctcccgcctcctcctccggcgccacg 39618 Query: 120 t 120 | Sbjct: 39617 t 39617
>gb|AF188287.1|AF188287 Stigmatella aurantiaca myxothiazol gene cluster, complete sequence Length = 42603 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 ctcgacctgctcccccgcctc 103 ||||||||||||||||||||| Sbjct: 41997 ctcgacctgctcccccgcctc 41977
>dbj|AK060509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D01, full insert sequence Length = 1237 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 gcctcgccgccgccggcgctg 344 ||||||||||||||||||||| Sbjct: 640 gcctcgccgccgccggcgctg 660
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cgccaccgccgacggcgacca 71 ||||||||||||||||||||| Sbjct: 27867 cgccaccgccgacggcgacca 27847
>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence Length = 195448 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 109278 ccccgcctcctcctccgtcg 109259 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 68062 ccccgcctcctcctccgtcg 68043
>ref|XM_473914.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 49 ctgcctcgccgccgccggcg 30
>ref|XM_472841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2445 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggcctgcctcgccgccgccg 338 |||||||||||||||||||| Sbjct: 2280 ggcctgcctcgccgccgccg 2299
>gb|BT017984.1| Zea mays clone EL01N0525E01.c mRNA sequence Length = 1414 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 683 ccccgcctcctcctccgtcg 664
>gb|DQ232587.1| Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence Length = 37100 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cccccgcctcctcctccgtcgcca 117 ||||||||||| |||||||||||| Sbjct: 32980 cccccgcctccgcctccgtcgcca 33003
>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence Length = 106246 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 86569 ccccgcctcctcctccgtcg 86588
>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence Length = 100828 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cccccgcctcctcctccgtcgcca 117 ||||||||||| |||||||||||| Sbjct: 86741 cccccgcctccgcctccgtcgcca 86718
>ref|XM_367312.1| Magnaporthe grisea 70-15 hypothetical protein (MG07237.4) partial mRNA Length = 366 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 gaggagaagtacgccgaggc 321 |||||||||||||||||||| Sbjct: 307 gaggagaagtacgccgaggc 326
>gb|AY455286.1| Zea mays chloroplast phytoene synthase (Y1) gene, complete cds; nuclear gene for chloroplast product Length = 94829 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 61913 ccccgcctcctcctccgtcg 61894
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 acatggaggccgaggagaag 310 |||||||||||||||||||| Sbjct: 117289 acatggaggccgaggagaag 117308
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccgccaccgccgacggcgac 69 |||||||||||||||||||| Sbjct: 139490 ccgccaccgccgacggcgac 139471
>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1 through 3 and partial cds Length = 107840 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 29738 ccccgcctcctcctccgtcg 29757
>gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia retrotransposon ji, complete sequence; and helitron Mo17_14594, complete sequence Length = 57607 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 4825 ccccgcctcctcctccgtcg 4806
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccgccaccgccgacggcgac 69 |||||||||||||||||||| Sbjct: 22646 ccgccaccgccgacggcgac 22627
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gccggcgctgaccggctcgc 354 |||||||||||||||||||| Sbjct: 2883695 gccggcgctgaccggctcgc 2883676
>ref|XM_742218.1| Aspergillus fumigatus Af293 hypothetical protein (Afu8g05060) partial mRNA Length = 1947 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gccgccaccgccgacggcga 68 |||||||||||||||||||| Sbjct: 1519 gccgccaccgccgacggcga 1538
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 202639 ccccgcctcctcctccgtcg 202620
>gb|AC161221.7| Mus musculus chromosome 1, clone RP24-228M19, complete sequence Length = 164548 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 cgcctcctcctccgtcgccacgtc 121 |||||||||||| ||||||||||| Sbjct: 27526 cgcctcctcctctgtcgccacgtc 27549
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 121751 ccccgcctcctcctccgtcg 121770 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 45037 ccccgcctcctcctccgtcg 45018
>gb|AF333167.1| Dermatocarpon cf. bachmannii SM-2001 isolate SH43 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 559 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcga 68 |||||||||||||||||||| Sbjct: 390 gccgccaccgccgacggcga 371
>gb|AF333166.1| Dermatocarpon rivulorum isolate SH54 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 556 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 gccgccaccgccgacggcga 68 |||||||||||||||||||| Sbjct: 387 gccgccaccgccgacggcga 368
>emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chromosome 13 Contains the gene for zinc finger protein of the cerebellum 5 (ZIC5), the ZIC2 gene for Zic family member 2 (odd-paired homolog Drosophila), a 13kDa differentiation-associated protein (DAP13) pseudogene, an asparagine synthetase (ASNS) pseudogene, the 5' end of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide and seven CpG islands, complete sequence Length = 153762 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctcccccgcctcctcctccg 111 |||||||||||||||||||| Sbjct: 41448 ctcccccgcctcctcctccg 41467
>gb|AY297046.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant C (TRPM4) mRNA, complete cds; alternatively spliced Length = 3444 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1968 cccgcctcctcctccgtcgc 1987
>gb|AY297045.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant B (TRPM4) mRNA, complete cds; alternatively spliced Length = 3879 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1968 cccgcctcctcctccgtcgc 1987
>gb|AY297044.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant A (TRPM4) mRNA, complete cds; alternatively spliced Length = 3523 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1612 cccgcctcctcctccgtcgc 1631
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ccggcgctgaccggctcgcc 355 |||||||||||||||||||| Sbjct: 1841487 ccggcgctgaccggctcgcc 1841506
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ccgccaccgccgacggcgac 69 |||||||||||||||||||| Sbjct: 699355 ccgccaccgccgacggcgac 699374
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 cctcgccgccgccggcgctgaccg 348 |||||||||||||||||| ||||| Sbjct: 408724 cctcgccgccgccggcgccgaccg 408747
>ref|NM_017636.2| Homo sapiens transient receptor potential cation channel, subfamily M, member 4 (TRPM4), mRNA Length = 4061 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1988 cccgcctcctcctccgtcgc 2007
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ctcgctctccgacgccgccg 269 |||||||||||||||||||| Sbjct: 83502 ctcgctctccgacgccgccg 83521
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggcctgcctcgccgccgccg 338 |||||||||||||||||||| Sbjct: 61367 ggcctgcctcgccgccgccg 61386
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 86080 ctgcctcgccgccgccggcg 86061
>emb|AL034433.2|SPBC1604 S.pombe chromosome II cosmid c1604 Length = 41825 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 tctcgacctgctcccccgcctcct 105 ||||||||||||||| |||||||| Sbjct: 15150 tctcgacctgctcccacgcctcct 15173
>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence Length = 233369 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 25595 ccccgcctcctcctccgtcg 25614
>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence Length = 176679 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 57168 ccccgcctcctcctccgtcg 57149
>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence Length = 117628 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 74960 cccgcctcctcctccgtcgc 74941
>tpg|BK005042.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 39 (WRKY39) gene, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 436 cctgcctcgccgccgccggc 417
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccgcc 271 |||||| ||||||||||||||||| Sbjct: 4305495 ggctcggtctccgacgccgccgcc 4305518
>gb|AF497623.1| Homo sapiens cation channel TRPM4B (TRPM4B) mRNA, complete cds Length = 4061 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1988 cccgcctcctcctccgtcgc 2007
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 cctccgtcgccacgtccaccgccg 129 |||||||||||||| ||||||||| Sbjct: 799109 cctccgtcgccacggccaccgccg 799086
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 96818 ccccgcctcctcctccgtcg 96799
>gb|AY046396.1| Homo sapiens TRP-related cation influx channel (TRPM4) mRNA, complete cds Length = 3701 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1616 cccgcctcctcctccgtcgc 1635
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cctcgccgccgccggcgctg 344 |||||||||||||||||||| Sbjct: 879098 cctcgccgccgccggcgctg 879079
>ref|NM_001022547.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1604.14c), partial mRNA Length = 1977 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 tctcgacctgctcccccgcctcct 105 ||||||||||||||| |||||||| Sbjct: 760 tctcgacctgctcccacgcctcct 783
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 9446490 cctgcctcgccgccgccggc 9446471
>gb|AC154484.2| Mus musculus BAC clone RP24-115C5 from chromosome 14, complete sequence Length = 193855 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aaaaccccacctaaaacctc 44 |||||||||||||||||||| Sbjct: 65456 aaaaccccacctaaaacctc 65475
>dbj|AB097553.1| Macaca fascicularis brain cDNA clone:QmoA-14276, similar to human transient receptor potential cation channel (TRPM4), mRNA, NM_017636.2 Length = 2157 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1981 cccgcctcctcctccgtcgc 2000
>gb|AC138570.1| Zea mays genomic clone ZM16H10, finished contig 37375, complete sequence Length = 20702 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 12654 ccccgcctcctcctccgtcg 12673
>gb|AF466932.1| Zea mays clone BAC 206C17, complete sequence Length = 99156 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 83543 ccccgcctcctcctccgtcg 83524
>gb|AY496576.1| Uncultured bacterium clone pELP45 oxidoreductase gene, partial cds; and lipase/esterase gene, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 cgccgccggcgctgaccggctcgc 354 ||||||| |||||||||||||||| Sbjct: 532 cgccgcccgcgctgaccggctcgc 509
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccgcc 271 ||||||||||||| |||||||||| Sbjct: 17243 ggctcgctctccgccgccgccgcc 17266
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 ggctcgctctccgacgccgccgcc 271 ||||||||||||| |||||||||| Sbjct: 59465 ggctcgctctccgccgccgccgcc 59488
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cgaggcctgcctcgccgccg 335 |||||||||||||||||||| Sbjct: 1636428 cgaggcctgcctcgccgccg 1636447
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 60051 cctgcctcgccgccgccggc 60032
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 54510 ctgcctcgccgccgccggcg 54491
>emb|AJ575813.1|HSA575813 Homo sapiens mRNA for transient receptor potential ion channel melastatin subgroup member 4 protein (TRPM4 gene) Length = 4042 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1957 cccgcctcctcctccgtcgc 1976
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gacgccgccgccatgcgcca 279 |||||||||||||||||||| Sbjct: 111845 gacgccgccgccatgcgcca 111864
>dbj|AK000048.1| Homo sapiens cDNA FLJ20041 fis, clone COL00423 Length = 3810 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 1717 cccgcctcctcctccgtcgc 1736
>dbj|AK119593.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D06, full insert sequence Length = 1820 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 614 cctgcctcgccgccgccggc 595
>dbj|AK000235.1| Homo sapiens cDNA FLJ20228 fis, clone COLF5163 Length = 2981 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cccgcctcctcctccgtcgc 115 |||||||||||||||||||| Sbjct: 880 cccgcctcctcctccgtcgc 899
>ref|XM_312615.2| Anopheles gambiae str. PEST ENSANGP00000022573 (ENSANGG00000020751), partial mRNA Length = 1855 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 cctgctcccccgcctcctcctccg 111 ||||||||||||||| |||||||| Sbjct: 1322 cctgctcccccgcctgctcctccg 1299
>dbj|AK110053.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-D01, full insert sequence Length = 2746 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggcctgcctcgccgccgccg 338 |||||||||||||||||||| Sbjct: 2502 ggcctgcctcgccgccgccg 2521
>dbj|AK107047.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C10, full insert sequence Length = 1715 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 815 cctgcctcgccgccgccggc 834
>emb|AJ324836.1|HSA324836 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IN10R Length = 750 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 197 ctgcctcgccgccgccggcg 178
>dbj|AK101725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061C03, full insert sequence Length = 1463 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 ggctcgctctccgacgccgccgcc 271 ||||||||||||| |||||||||| Sbjct: 87 ggctcgctctccgccgccgccgcc 64
>dbj|AK069724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J11, full insert sequence Length = 964 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 cgcctcctcctccgtcgcca 117 |||||||||||||||||||| Sbjct: 410 cgcctcctcctccgtcgcca 429
>dbj|AK066775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074N21, full insert sequence Length = 1841 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cctgcctcgccgccgccggc 340 |||||||||||||||||||| Sbjct: 615 cctgcctcgccgccgccggc 596
>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S ribosomal protein S8 (Z214A02.25), and putative casein kinase I (Z214A02.27) genes, complete cds Length = 158797 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 26660 ccccgcctcctcctccgtcg 26641
>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol precursor -orf2, putative Fourf gag/pol protein, putative NADP-dependent malic enzyme, putative argonaute protein, putative pinhead protein, putative pol protein, putative gag protein, putative TNP2, r1-B73 proteins, putative genetic modifier, putative S-receptor kinase, putative aldose reductase-related protein, putative glutathione peroxidase, putative glycerol 3-phosphate permease, putative response regulator, and putative 4-coumarate-CoA ligase-like protein genes, complete cds Length = 290350 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 149526 ccccgcctcctcctccgtcg 149507 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 8341 ccccgcctcctcctccgtcg 8360
>dbj|AK066247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052H21, full insert sequence Length = 1305 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ctgcctcgccgccgccggcg 341 |||||||||||||||||||| Sbjct: 74 ctgcctcgccgccgccggcg 55
>gb|AF069545.1|AF069545 Rhodobacter sphaeroides f. sp. denitrificans NapE (napE), NapF (napF), NapD (napD), periplasmic nitrate reductase precursor (napA), cytochrome c precursor (napB), and membranous tetrahemic cytochrome c (napC) genes, complete cds Length = 7497 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cccccgcctcctcctccgtcgcca 117 ||||||||||| |||||||||||| Sbjct: 7258 cccccgcctccgcctccgtcgcca 7235
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 120713 ccccgcctcctcctccgtcg 120732
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 300436 ccccgcctcctcctccgtcg 300417 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ccccgcctcctcctccgtcg 114 |||||||||||||||||||| Sbjct: 85740 ccccgcctcctcctccgtcg 85759
>emb|CR388141.9| Zebrafish DNA sequence from clone DKEY-28J8 in linkage group 14, complete sequence Length = 224582 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 catggaggccgaggagaagt 311 |||||||||||||||||||| Sbjct: 150853 catggaggccgaggagaagt 150834
>emb|CR847890.19| Zebrafish DNA sequence from clone DKEYP-70H9 in linkage group 14, complete sequence Length = 217550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 catggaggccgaggagaagt 311 |||||||||||||||||||| Sbjct: 61988 catggaggccgaggagaagt 62007
>gb|U22371.1|SPU22371 Schizosaccharomyces pombe Pak1p (PAK1) mRNA, complete cds Length = 2944 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 tctcgacctgctcccccgcctcct 105 ||||||||||||||| |||||||| Sbjct: 1192 tctcgacctgctcccacgcctcct 1215
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gccgccaccgccgacggcga 68 |||||||||||||||||||| Sbjct: 3492325 gccgccaccgccgacggcga 3492344
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccgccaccgccgacggcgac 69 |||||||||||||||||||| Sbjct: 25851269 ccgccaccgccgacggcgac 25851250
>gb|L41552.1|YSPSHK1A Schizosaccharomyces pombe Ste20 homologous protein kinase 1 (Shk1) gene, complete cds Length = 2097 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 tctcgacctgctcccccgcctcct 105 ||||||||||||||| |||||||| Sbjct: 847 tctcgacctgctcccacgcctcct 870
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 cgacggcgaccatgcgccgtcatc 83 |||||||||| ||||||||||||| Sbjct: 22326 cgacggcgactatgcgccgtcatc 22303
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 cctcctccgtcgccacgtccaccg 126 |||||||| ||||||||||||||| Sbjct: 2095588 cctcctccatcgccacgtccaccg 2095611 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gccgcgccaggaccggggcc 145 |||||||||||||||||||| Sbjct: 1543957 gccgcgccaggaccggggcc 1543976
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 acatggaggccgaggagaag 310 |||||||||||||||||||| Sbjct: 88922 acatggaggccgaggagaag 88941
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cggcaaaaccccacctaaaa 40 |||||||||||||||||||| Sbjct: 635148 cggcaaaaccccacctaaaa 635167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,739,154 Number of Sequences: 3902068 Number of extensions: 3739154 Number of successful extensions: 106973 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102143 Number of HSP's gapped (non-prelim): 4828 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
