ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197282.1| Oryza sativa (japonica cultivar-group) unknown ... 157 4e-35
2gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 gen... 157 4e-35
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 157 4e-35
5gb|AY657377.1| Synthetic construct Peudomonas aeruginosa clone F... 44 0.38
6gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.38
7gb|AE004512.1| Pseudomonas aeruginosa PAO1, section 73 of 529 of... 44 0.38
8gb|AC154494.2| Mus musculus BAC clone RP24-111G24 from chromosom... 42 1.5
9ref|XM_615057.2| PREDICTED: Bos taurus similar to Anaphase promo... 42 1.5
10ref|XM_543811.2| PREDICTED: Canis familiaris similar to LOH1CR12... 42 1.5
11gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.5
12gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
13gb|BC013668.1| Homo sapiens loss of heterozygosity, 12, chromoso... 40 5.9
14gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
15ref|NM_058169.2| Homo sapiens loss of heterozygosity, 12, chromo... 40 5.9
16gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
17gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
18gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosom... 40 5.9
19ref|XM_751292.1| Ustilago maydis 521 hypothetical protein (UM002... 40 5.9
20gb|AC123813.4| Mus musculus BAC clone RP24-229D8 from chromosome... 40 5.9
21gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.9
22gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.9
23emb|AL161654.14| Human DNA sequence from clone RP11-59G22 on chr... 40 5.9
24gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.9
25emb|X87941.1|SCDNAGENS S.cerevisiae CRM1, YML9, PET54, SMI1, PHO... 40 5.9
26emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; ... 40 5.9
27emb|CR626601.1| full-length cDNA clone CS0DE004YO16 of Placenta ... 40 5.9
28dbj|AK075028.1| Homo sapiens cDNA FLJ90547 fis, clone OVARC1000467 40 5.9
29gb|AY037866.1| Homo sapiens LOH12CR1 (LOH12CR1) mRNA, complete c... 40 5.9
30gb|AY037865.1| Homo sapiens LOH12CR1 (LOH12CR1) mRNA, complete cds 40 5.9
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
33emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chr... 40 5.9
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
35gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, R... 40 5.9
36gb|AF231345.1|AF231345 Globicephala macrorhynchus von Willebrand... 40 5.9
37dbj|AK111350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
38dbj|AK105986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
39dbj|AK073309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
40gb|AC007619.23| Homo sapiens 12 BAC RP11-253I19 (Roswell Park Ca... 40 5.9
41gb|AF061060.1|AF061060 Phocoena phocoena von Willebrand factor g... 40 5.9
42emb|Z73009.1|SCYGR224W S.cerevisiae chromosome VII reading frame... 40 5.9
43emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.9
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
45emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.9
46gb|AC122513.5| Mus musculus BAC clone RP24-455A5 from 3, complet... 40 5.9
47gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromoso... 40 5.9
48gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromoso... 40 5.9
49gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, comple... 40 5.9
50gb|AC171269.2| Mus musculus chromosome 3, clone wi1-1865E14, com... 40 5.9 
>ref|NM_197282.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0091N21.32), mRNA
          Length = 1184

 Score =  157 bits (79), Expect = 4e-35
 Identities = 139/159 (87%)
 Strand = Plus / Minus

                                                                       
Query: 150 gccgccgccgctgtctgcgacgacgtgcacgactccaaggaggtcgtcctgcggcggtac 209
           ||||||||| | ||| ||||||| | ||||||||| |||||||||||||||||  |||||
Sbjct: 201 gccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtac 142

                                                                       
Query: 210 tttctccaggaatgggagctggtctccgccatcctccgccgcatcgtcgccgctggcggc 269
           ||  ||||||| |||||| | ||||||| |||||||||||||||||||| ||| || |||
Sbjct: 141 ttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggc 82

                                                  
Query: 270 gtcgcggaacccgccgacgtccacaggatccgctccatc 308
           ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 81  gtcgccgaacccgccgatgtccagaggatccgctccatc 43
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>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete
             sequence
          Length = 151991

 Score =  157 bits (79), Expect = 4e-35
 Identities = 139/159 (87%)
 Strand = Plus / Plus

                                                                         
Query: 150   gccgccgccgctgtctgcgacgacgtgcacgactccaaggaggtcgtcctgcggcggtac 209
             ||||||||| | ||| ||||||| | ||||||||| |||||||||||||||||  |||||
Sbjct: 72473 gccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtac 72532

                                                                         
Query: 210   tttctccaggaatgggagctggtctccgccatcctccgccgcatcgtcgccgctggcggc 269
             ||  ||||||| |||||| | ||||||| |||||||||||||||||||| ||| || |||
Sbjct: 72533 ttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggc 72592

                                                    
Query: 270   gtcgcggaacccgccgacgtccacaggatccgctccatc 308
             ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 72593 gtcgccgaacccgccgatgtccagaggatccgctccatc 72631



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 309   atggacaaatatcaagaagaaggtcaacttctcgagccatacctagaagacatcatctca 368
             ||||| ||||||||||| || |||||||| || |||||||| |||||   ||||||||| 
Sbjct: 73051 atggataaatatcaagaggagggtcaactcctagagccatatctagagagcatcatctct 73110

                      
Query: 369   ccacttatg 377
             |||||||||
Sbjct: 73111 ccacttatg 73119
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  157 bits (79), Expect = 4e-35
 Identities = 139/159 (87%)
 Strand = Plus / Minus

                                                                            
Query: 150      gccgccgccgctgtctgcgacgacgtgcacgactccaaggaggtcgtcctgcggcggtac 209
                ||||||||| | ||| ||||||| | ||||||||| |||||||||||||||||  |||||
Sbjct: 19006191 gccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtac 19006132

                                                                            
Query: 210      tttctccaggaatgggagctggtctccgccatcctccgccgcatcgtcgccgctggcggc 269
                ||  ||||||| |||||| | ||||||| |||||||||||||||||||| ||| || |||
Sbjct: 19006131 ttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggc 19006072

                                                       
Query: 270      gtcgcggaacccgccgacgtccacaggatccgctccatc 308
                ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 19006071 gtcgccgaacccgccgatgtccagaggatccgctccatc 19006033



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 309      atggacaaatatcaagaagaaggtcaacttctcgagccatacctagaagacatcatctca 368
                ||||| ||||||||||| || |||||||| || |||||||| |||||   ||||||||| 
Sbjct: 19005613 atggataaatatcaagaggagggtcaactcctagagccatatctagagagcatcatctct 19005554

                         
Query: 369      ccacttatg 377
                |||||||||
Sbjct: 19005553 ccacttatg 19005545
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  157 bits (79), Expect = 4e-35
 Identities = 139/159 (87%)
 Strand = Plus / Minus

                                                                            
Query: 150      gccgccgccgctgtctgcgacgacgtgcacgactccaaggaggtcgtcctgcggcggtac 209
                ||||||||| | ||| ||||||| | ||||||||| |||||||||||||||||  |||||
Sbjct: 19017445 gccgccgccacggtcggcgacgatgagcacgactcgaaggaggtcgtcctgcgcaggtac 19017386

                                                                            
Query: 210      tttctccaggaatgggagctggtctccgccatcctccgccgcatcgtcgccgctggcggc 269
                ||  ||||||| |||||| | ||||||| |||||||||||||||||||| ||| || |||
Sbjct: 19017385 ttcatccaggagtgggagatcgtctccgacatcctccgccgcatcgtcgacgccggtggc 19017326

                                                       
Query: 270      gtcgcggaacccgccgacgtccacaggatccgctccatc 308
                ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 19017325 gtcgccgaacccgccgatgtccagaggatccgctccatc 19017287



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 309      atggacaaatatcaagaagaaggtcaacttctcgagccatacctagaagacatcatctca 368
                ||||| ||||||||||| || |||||||| || |||||||| |||||   ||||||||| 
Sbjct: 19016867 atggataaatatcaagaggagggtcaactcctagagccatatctagagagcatcatctct 19016808

                         
Query: 369      ccacttatg 377
                |||||||||
Sbjct: 19016807 ccacttatg 19016799
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>gb|AY657377.1| Synthetic construct Peudomonas aeruginosa clone FLH043180.01F
           PA0778 gene, partial cds
          Length = 405

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 253 tcgtcgccgctggcggcgtcgcggaa 278
           |||||||||||||||||| |||||||
Sbjct: 320 tcgtcgccgctggcggcgacgcggaa 295
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 250     gcatcgtcgccgctggcggcgtcgcg 275
               |||||||||||| |||||||||||||
Sbjct: 5258124 gcatcgtcgccggtggcggcgtcgcg 5258149



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 249     cgcatcgtcgccgctggcggcgtcg 273
               |||||| ||||||||||||||||||
Sbjct: 4471460 cgcatcatcgccgctggcggcgtcg 4471436
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>gb|AE004512.1| Pseudomonas aeruginosa PAO1, section 73 of 529 of the complete genome
          Length = 10081

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 253  tcgtcgccgctggcggcgtcgcggaa 278
            |||||||||||||||||| |||||||
Sbjct: 7127 tcgtcgccgctggcggcgacgcggaa 7152
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>gb|AC154494.2| Mus musculus BAC clone RP24-111G24 from chromosome 9, complete sequence
          Length = 182959

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 71     cacagagactgtctccatgcctgtc 95
              |||||||||||||||| ||||||||
Sbjct: 102637 cacagagactgtctccctgcctgtc 102661
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>ref|XM_615057.2| PREDICTED: Bos taurus similar to Anaphase promoting complex subunit
           7 (APC7) (Cyclosome subunit 7) (LOC535072), mRNA
          Length = 2442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 ctgccgccgccgctgtctgcg 168
           |||||||||||||||||||||
Sbjct: 64  ctgccgccgccgctgtctgcg 84
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>ref|XM_543811.2| PREDICTED: Canis familiaris similar to LOH1CR12 (LOC486684), mRNA
          Length = 591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 234 tccgccatcctccgccgcatc 254
           |||||||||||||||||||||
Sbjct: 457 tccgccatcctccgccgcatc 477
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 236     cgccatcctccgccgcatcgtcgcc 260
               ||||||| |||||||||||||||||
Sbjct: 1117013 cgccatcgtccgccgcatcgtcgcc 1116989
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>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017N18, complete sequence
          Length = 156643

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tcctactgccgccgccgctg 162
             ||||||||||||||||||||
Sbjct: 44049 tcctactgccgccgccgctg 44030
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>gb|BC013668.1| Homo sapiens loss of heterozygosity, 12, chromosomal region 1, mRNA
           (cDNA clone MGC:17326 IMAGE:4154039), complete cds
          Length = 1239

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 714 tccgccatcctccgccgcat 733
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>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I,
             complete sequence
          Length = 99587

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tcctactgccgccgccgctg 162
             ||||||||||||||||||||
Sbjct: 31321 tcctactgccgccgccgctg 31302
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>ref|NM_058169.2| Homo sapiens loss of heterozygosity, 12, chromosomal region 1
           (LOH12CR1), mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 788 tccgccatcctccgccgcat 807
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>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09,
              complete sequence
          Length = 156776

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     gtccactccgccgccgccat 67
              ||||||||||||||||||||
Sbjct: 116953 gtccactccgccgccgccat 116972
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>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09,
             complete sequence
          Length = 151345

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    gtccactccgccgccgccat 67
             ||||||||||||||||||||
Sbjct: 12602 gtccactccgccgccgccat 12621
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>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence
          Length = 183918

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 316   aatatcaagaagaaggtcaacttc 339
             |||||||||||||| |||||||||
Sbjct: 48205 aatatcaagaagaatgtcaacttc 48182
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>ref|XM_751292.1| Ustilago maydis 521 hypothetical protein (UM00238.1) partial mRNA
          Length = 4485

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   ctcgcaagtcgcagccacct 47
            ||||||||||||||||||||
Sbjct: 1038 ctcgcaagtcgcagccacct 1057
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>gb|AC123813.4| Mus musculus BAC clone RP24-229D8 from chromosome 8, complete sequence
          Length = 175377

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   cttggtgctgccacagatga 424
             ||||||||||||||||||||
Sbjct: 39109 cttggtgctgccacagatga 39090
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 256     tcgccgctggcggcgtcgcggaac 279
               ||||||||||||||| ||||||||
Sbjct: 2169322 tcgccgctggcggcgccgcggaac 2169345
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 255     gtcgccgctggcggcgtcgc 274
               ||||||||||||||||||||
Sbjct: 5172943 gtcgccgctggcggcgtcgc 5172924
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>emb|AL161654.14| Human DNA sequence from clone RP11-59G22 on chromosome 10 Contains part
             of a novel gene (KIAA1136) (FLJ37801) and a CpG island,
             complete sequence
          Length = 159231

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atgcctgtcacacctgacca 106
             ||||||||||||||||||||
Sbjct: 66588 atgcctgtcacacctgacca 66607
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    ccgcaggcactggcgctggg 128
              ||||||||||||||||||||
Sbjct: 154708 ccgcaggcactggcgctggg 154727
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>emb|X87941.1|SCDNAGENS S.cerevisiae CRM1, YML9, PET54, SMI1, PHO81, YHB4 and PFK1 genes
          Length = 43118

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   tcatggacaaatatcaagaa 326
             ||||||||||||||||||||
Sbjct: 15668 tcatggacaaatatcaagaa 15687
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>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5
          Length = 316900

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    atggacaaatatcaagaaga 328
              ||||||||||||||||||||
Sbjct: 110830 atggacaaatatcaagaaga 110849
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>emb|CR626601.1| full-length cDNA clone CS0DE004YO16 of Placenta of Homo sapiens
           (human)
          Length = 1585

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 339 tccgccatcctccgccgcat 358
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>dbj|AK075028.1| Homo sapiens cDNA FLJ90547 fis, clone OVARC1000467
          Length = 2049

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 788 tccgccatcctccgccgcat 807
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>gb|AY037866.1| Homo sapiens LOH12CR1 (LOH12CR1) mRNA, complete cds; alternatively
           spliced
          Length = 549

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 347 tccgccatcctccgccgcat 366
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>gb|AY037865.1| Homo sapiens LOH12CR1 (LOH12CR1) mRNA, complete cds
          Length = 693

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 tccgccatcctccgccgcat 253
           ||||||||||||||||||||
Sbjct: 491 tccgccatcctccgccgcat 510
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      gtccactccgccgccgccat 67
               ||||||||||||||||||||
Sbjct: 4637325 gtccactccgccgccgccat 4637306
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 143      tcctactgccgccgccgctg 162
                ||||||||||||||||||||
Sbjct: 28616257 tcctactgccgccgccgctg 28616238



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 48       gtccactccgccgccgccat 67
                ||||||||||||||||||||
Sbjct: 11791313 gtccactccgccgccgccat 11791332
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>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete
              sequence
          Length = 215003

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    actttctccaggaatgggag 227
              ||||||||||||||||||||
Sbjct: 119743 actttctccaggaatgggag 119762
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gccgcatcgtcgccgctggcggcg 270
             ||||||||||||||||||| ||||
Sbjct: 89992 gccgcatcgtcgccgctggtggcg 90015
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>gb|AC068947.17| Mus Musculus Strain C57BL6/J Chromosome 3 BAC, RP23-108E10, complete
              sequence
          Length = 211512

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    cctagaagacatcatctcac 369
              ||||||||||||||||||||
Sbjct: 153377 cctagaagacatcatctcac 153396
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>gb|AF231345.1|AF231345 Globicephala macrorhynchus von Willebrand factor gene, partial cds
          Length = 932

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 183 tccaaggaggtcgtcctgcggcgg 206
           |||||||||| |||||||||||||
Sbjct: 797 tccaaggaggacgtcctgcggcgg 820
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>dbj|AK111350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G06, full
           insert sequence
          Length = 1096

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 143 tcctactgccgccgccgctg 162
           ||||||||||||||||||||
Sbjct: 810 tcctactgccgccgccgctg 791
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>dbj|AK105986.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G08, full
           insert sequence
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  gtccactccgccgccgccat 67
           ||||||||||||||||||||
Sbjct: 96  gtccactccgccgccgccat 115
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>dbj|AK073309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029G06, full
           insert sequence
          Length = 1014

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  gtccactccgccgccgccat 67
           ||||||||||||||||||||
Sbjct: 92  gtccactccgccgccgccat 111
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>gb|AC007619.23| Homo sapiens 12 BAC RP11-253I19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172206

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   tccgccatcctccgccgcat 253
             ||||||||||||||||||||
Sbjct: 68216 tccgccatcctccgccgcat 68197
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>gb|AF061060.1|AF061060 Phocoena phocoena von Willebrand factor gene, exon 28 and partial
           cds
          Length = 1208

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 183 tccaaggaggtcgtcctgcggcgg 206
           |||||||||| |||||||||||||
Sbjct: 933 tccaaggaggacgtcctgcggcgg 956
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>emb|Z73009.1|SCYGR224W S.cerevisiae chromosome VII reading frame ORF YGR224w
          Length = 2929

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  tcatggacaaatatcaagaa 326
            ||||||||||||||||||||
Sbjct: 1695 tcatggacaaatatcaagaa 1714
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 257     cgccgctggcggcgtcgcggaacccgccgacg 288
               |||||||||||||| ||| ||||||| |||||
Sbjct: 2243073 cgccgctggcggcgacgcagaacccgtcgacg 2243042
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      gtccactccgccgccgccat 67
               ||||||||||||||||||||
Sbjct: 4637306 gtccactccgccgccgccat 4637287
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>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147355

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     gtccactccgccgccgccat 67
              ||||||||||||||||||||
Sbjct: 114802 gtccactccgccgccgccat 114821
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>gb|AC122513.5| Mus musculus BAC clone RP24-455A5 from 3, complete sequence
          Length = 164485

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   cctagaagacatcatctcac 369
             ||||||||||||||||||||
Sbjct: 13580 cctagaagacatcatctcac 13561
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>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
             sequence
          Length = 228494

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    cagagactgtctccatgcct 92
             ||||||||||||||||||||
Sbjct: 16149 cagagactgtctccatgcct 16168
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>gb|AC158368.2| Gallus gallus BAC clone CH261-77E11 from chromosome unknown, complete
             sequence
          Length = 180657

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cagagactgtctccatgcct 92
             ||||||||||||||||||||
Sbjct: 50759 cagagactgtctccatgcct 50740
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>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence
          Length = 215518

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    aatatcaagaagaaggtcaacttc 339
              |||||||||||||| |||||||||
Sbjct: 107432 aatatcaagaagaatgtcaacttc 107455
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>gb|AC171269.2| Mus musculus chromosome 3, clone wi1-1865E14, complete sequence
          Length = 35132

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   cctagaagacatcatctcac 369
             ||||||||||||||||||||
Sbjct: 29153 cctagaagacatcatctcac 29134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,988,537
Number of Sequences: 3902068
Number of extensions: 3988537
Number of successful extensions: 73595
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72770
Number of HSP's gapped (non-prelim): 825
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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