Clone Name | bastl38f04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PATL2_ARATH (Q56ZI2) Patellin-2 | 30 | 2.7 | 2 | FIBP_ADE02 (P03275) Fiber protein (pIV) | 29 | 4.6 | 3 | AMOT_HUMAN (Q4VCS5) Angiomotin | 29 | 4.6 | 4 | MUC1_YEAST (P08640) Mucin-like protein 1 precursor | 29 | 6.0 | 5 | DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... | 29 | 6.0 | 6 | PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... | 28 | 7.9 |
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>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/59 (30%), Positives = 23/59 (38%) Frame = -2 Query: 283 EVAPVAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVAT 107 E P AP+ A T E+ P AP+T T E KE+E+ V T Sbjct: 198 ETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTT 256
>FIBP_ADE02 (P03275) Fiber protein (pIV)| Length = 582 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 Query: 268 APLTACTGAVEVAPVAPLTARTGAL 194 APLT +GA+ VA APL +GAL Sbjct: 103 APLTITSGALTVATTAPLIVTSGAL 127
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/81 (24%), Positives = 23/81 (28%) Frame = -2 Query: 436 TCTVEVAAVAQVASRTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVAPVAPLT 257 T T+ AA VA+ A VAP Sbjct: 904 TTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSA 963 Query: 256 ACTGAVEVAPVAPLTARTGAL 194 A AV+VAP AP AL Sbjct: 964 AAAAAVQVAPAAPAPVPAPAL 984
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +3 Query: 75 APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 203 AP+P P+SSS + + PSS F S+ P Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906
>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 295 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 49 IREARGRPARHCRGQRRLRQSPLVTPPP 132 +REA GR A+ CR R L+ PPP Sbjct: 178 VREATGRTAQRCRLSPRAAAERLLGPPP 205
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%) Frame = -2 Query: 115 VATVEDDAGRGSGAPA----------GLELHVLPAAA 35 +A+V D GRG G PA GL L+++PAAA Sbjct: 17 IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,428,991 Number of Sequences: 219361 Number of extensions: 393588 Number of successful extensions: 1772 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1761 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)