ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38e11 |
|---|---|
| Clone Library Name | barley_pub |
>YNB9_YEAST (P53975) Hypothetical protein YNL019C precursor| Length = 284 Score = 30.8 bits (68), Expect = 1.5 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Frame = +3 Query: 66 DGEQIRKAKLMSLGKGDPVTNSDLG-----GGYTAESLSRR-YRDYNFLDYNEKVIDGFY 227 +G +K LM++G+ V DL YT +SLS + + LD GF Sbjct: 156 EGSNRQKCLLMTVGENSIVPFHDLSTEICFDQYTLDSLSHHNHGSISILDAGSVSALGFA 215 Query: 228 DIFGPSAESSGHGKIPSLAELQMSIGDLGYEVI 326 DI K+PS++EL GD EV+ Sbjct: 216 DI---------SSKMPSVSELYTLFGDYTIEVL 239
>SUCB_YEAST (P53312) Succinyl-CoA ligase [GDP-forming] beta-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) Length = 427 Score = 30.8 bits (68), Expect = 1.5 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 16/112 (14%) Frame = +3 Query: 93 LMSLGKGDPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFG----------- 239 ++ L GDP D GGG T E++ + + + N+ V F +IFG Sbjct: 315 VIKLNGGDPANFLDCGGGATPETIK---QGFELILSNKNVDAIFVNIFGGIVRCDYVALG 371 Query: 240 -PSAESSGHGKIPSLAELQMSIGDLGYEVI----VVDYKFDNALQEMKEVAE 380 A ++P +A LQ + + G ++I V Y FD K+V E Sbjct: 372 LVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVVE 423
>SYD_SYNS9 (Q3AVS9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 610 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 Query: 149 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 V P+++ GDW ALP++ QL L+ GI R Sbjct: 183 VLPSRVCGGDWFALPQSPQLFKQLLMVGGIER 214
>PAG2_PIG (Q29079) Pregnancy-associated glycoprotein 2 precursor (EC| 3.4.23.-) (PAG 2) Length = 420 Score = 30.0 bits (66), Expect = 2.5 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -3 Query: 279 AMVFCRAQMIPQRGQICRRIHQLLSHYNQESYSPCNGGRATP 154 A+V M+ + +IH L+ H+ +E PCN +A P Sbjct: 274 AIVDTGTSMLHGPSKAVAKIHSLIKHFEKEYVVPCNARKALP 315
>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)| Length = 2260 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = -3 Query: 354 EHYQIYSQPQLLHIQDPQCSSEALPAMVFCRAQMIPQRGQICRRIHQLLSHYNQESYSPC 175 +H Q+ +Q LL +P SSEA VF + I +HQ + Q + PC Sbjct: 707 QHVQLLTQIYLLTTSNPNLSSEASTTRVFLKELGTFAENSIA--LHQQFNPRFQTLFQPC 764 Query: 174 N 172 N Sbjct: 765 N 765
>APC1_YEAST (P53886) Anaphase-promoting complex subunit 1| Length = 1748 Score = 30.0 bits (66), Expect = 2.5 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Frame = -3 Query: 381 ILLLPSSPAEHYQ----IYSQPQLLHI-QDPQCSSEALPAMVFCRAQMIPQR---GQICR 226 IL +PSS A+ YQ IY + H+ QD + +S LP +V +I + +CR Sbjct: 587 ILPIPSSSAQEYQEYKEIYERDLFQHLKQDSEITSSVLPRIVI-GLHLIREEYSLNVLCR 645 Query: 225 RIHQLLSHY 199 H LL + Sbjct: 646 NEHALLGQF 654
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -3 Query: 354 EHYQIYSQPQLLHIQDPQCSSEALPAMVFCRAQMIPQRGQICRRIHQLLSHYNQESYSPC 175 +H Q+ +Q LL +P SSEA VF + + + +HQ + Q + PC Sbjct: 706 QHVQLLTQIYLLTTSNPNLSSEASTTRVFLKE--LGTFAENSTALHQQFNPRFQTLFQPC 763 Query: 174 N 172 N Sbjct: 764 N 764
>LEU1_MYCBO (Q7TVV6) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 701 Score = 29.6 bits (65), Expect = 3.2 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%) Frame = +3 Query: 78 IRKAKLMSLGKGDPVTNSDLGGGYTAESLS--------RRYRDYNFLDYNEKVIDGFYDI 233 I+K + G+G V+ ++ + E L+ R++ D D I I Sbjct: 461 IQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTSITATVKI 520 Query: 234 FGPSAESSGHGKIPSLAELQMSIGDLGYEVIVVDY 338 G E SG G P LA ++ D+G++V V+DY Sbjct: 521 NGVETEISGSGNGP-LAAFVHALADVGFDVAVLDY 554
>YND3_YEAST (P53964) Protein YNL033W precursor| Length = 284 Score = 29.6 bits (65), Expect = 3.2 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Frame = +3 Query: 66 DGEQIRKAKLMSLGKGDPVTNSDLG-----GGYTAESLSRR-YRDYNFLDYNEKVIDGFY 227 +G +K LM++G+ V DL YT +SLS + + LD GF Sbjct: 156 EGSNRQKCLLMTVGENSIVPFHDLFTEICFDQYTLDSLSHHNHGSISILDAGSVSALGFA 215 Query: 228 DIFGPSAESSGHGKIPSLAELQMSIGDLGYEVI 326 DI K+PS++EL GD EV+ Sbjct: 216 DI---------SSKMPSVSELYTLFGDYTIEVL 239
>LEU1_MYCTU (P96420) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 644 Score = 29.6 bits (65), Expect = 3.2 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%) Frame = +3 Query: 78 IRKAKLMSLGKGDPVTNSDLGGGYTAESLS--------RRYRDYNFLDYNEKVIDGFYDI 233 I+K + G+G V+ ++ + E L+ R++ D D I I Sbjct: 461 IQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTSITATVKI 520 Query: 234 FGPSAESSGHGKIPSLAELQMSIGDLGYEVIVVDY 338 G E SG G P LA ++ D+G++V V+DY Sbjct: 521 NGVETEISGSGNGP-LAAFVHALADVGFDVAVLDY 554
>SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 605 Score = 29.6 bits (65), Expect = 3.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -1 Query: 143 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 P+++ GDW ALP++ QL L+ GI R Sbjct: 185 PSRVCEGDWFALPQSPQLFKQLLMVGGIER 214
>TRPE_NEIGO (Q9WW00) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 491 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 267 KIPSLAELQMS-IGDLGYEVIVVDYKFDNALQEMKEVAECCLLGCPDITVLV 419 +IPSL +G GYE + Y F++ +K A+ LG PDI +++ Sbjct: 108 EIPSLPRFTGGLVGYFGYETV---YNFEHFAHRLKNTAKANPLGTPDILLML 156
>TRPE_NEIG1 (Q5F8B4) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 491 Score = 29.3 bits (64), Expect = 4.2 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 267 KIPSLAELQMS-IGDLGYEVIVVDYKFDNALQEMKEVAECCLLGCPDITVLV 419 +IPSL +G GYE + Y F++ +K A+ LG PDI +++ Sbjct: 108 EIPSLPRFTGGLVGYFGYETV---YNFEHFAHRLKNTAKANPLGTPDILLML 156
>MCM4_MOUSE (P49717) DNA replication licensing factor MCM4 (CDC21 homolog)| (P1-CDC21) Length = 862 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 402 QDSPTGSILLLPSSPAEHYQIYSQPQLLHIQDPQCSSEALP 280 +DS TG +L +P+SP Q L PQ S A+P Sbjct: 40 EDSSTGELLPMPTSPGADLQSPPAQNALFSSPPQMHSLAIP 80
>YMF9_YEAST (Q04958) Hypothetical UPF0028 protein YML059c| Length = 1679 Score = 28.9 bits (63), Expect = 5.5 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +3 Query: 192 LDYNEKVIDGFYDIFGPSAESSGHGKIPSLAELQMSIG 305 ++Y + ++GF+ IF S H IP++AE+Q+ +G Sbjct: 1558 MEYGDS-LNGFWIIFNRWNPFSSHPNIPNMAEIQVRLG 1594
>VP12_RDVA (Q05054) Nonstructural protein Pns12A| Length = 312 Score = 28.9 bits (63), Expect = 5.5 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = +3 Query: 126 NSDLGGGYTAESLSRRYR---DYNFLDYNEKVIDGFYDIFGPSAESSGHGKIPSLAELQM 296 N+ G T + + + Y+ + Y+++V+D F+ F SAE GH + S Sbjct: 151 NTGRGSHGTGDGVEQHYKFDCEEGMSAYHKRVVDTFFKYFEYSAE-DGHSTLYSDVMFLS 209 Query: 297 SIGDLGYEVI 326 GDLG V+ Sbjct: 210 GHGDLGLLVM 219
>MDHP_ARATH (Q9SN86) Malate dehydrogenase, chloroplast precursor (EC 1.1.1.37)| (pNAD-MDH) Length = 403 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/86 (24%), Positives = 41/86 (47%) Frame = +3 Query: 72 EQIRKAKLMSLGKGDPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAE 251 E+I++ + G V ++ G G + +LS Y F++ + + +DG D++ S Sbjct: 279 EEIQELTVRIQNAGTEVVDAKAGAG--SATLSMAYAAARFVESSLRALDGDGDVYECSFV 336 Query: 252 SSGHGKIPSLAELQMSIGDLGYEVIV 329 S +P A ++ IG G E ++ Sbjct: 337 ESTLTDLPFFAS-RVKIGKNGLEAVI 361
>SUCB_NEUCR (Q9P567) Probable succinyl-CoA ligase [GDP-forming] beta-chain,| mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta) Length = 447 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = +3 Query: 93 LMSLGKGDPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFG--PSAESSGHG 266 ++ L G P D+GGG T ++ + + + KV F +IFG ++ HG Sbjct: 318 IIKLNGGQPANFLDVGGGATPAAIREA---FELITSDPKVTAIFVNIFGGIVRCDAIAHG 374 Query: 267 KIPSLAELQMSI 302 I ++ L + I Sbjct: 375 LINTVKSLDLKI 386
>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking| family 7) Length = 5327 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +1 Query: 67 TGSRLERPS**VSGRATQSPTAILVGDTPRSRSPAVTG 180 +GS+L+RP+ A S L GDT S SPA TG Sbjct: 5204 SGSKLKRPT-----PAFHSSRTSLAGDTSNSSSPASTG 5236
>SYD_SYNPX (Q7U3K6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 610 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -1 Query: 149 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 V P+++ G+W ALP++ QL L+ GI R Sbjct: 183 VLPSRVCGGEWFALPQSPQLFKQLLMVGGIER 214
>SYD_BIFLO (Q8G863) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 599 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -1 Query: 245 RGAKYVVESINYFLIIIKKVIVPVTAGERLRGVSPTKIAVGDWVALPETHQLGLSNLLPV 66 + A++ +E +++ + I G R V P ++ G W ALP++ QL L+ Sbjct: 155 KAARHALEDMDFTEVETPTFIKSTPEGAR-DFVVPARLVPGSWYALPQSPQLLKQLLMVS 213 Query: 65 GIPR 54 G+ R Sbjct: 214 GVER 217
>SYG_MYCPN (P75425) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA| ligase) (GlyRS) Length = 449 Score = 28.5 bits (62), Expect = 7.2 Identities = 23/74 (31%), Positives = 38/74 (51%) Frame = +3 Query: 198 YNEKVIDGFYDIFGPSAESSGHGKIPSLAELQMSIGDLGYEVIVVDYKFDNALQEMKEVA 377 Y +K +D F+D E++ H IP++ E + I L Y +IV Y+ + EM+EV Sbjct: 293 YAKKPLD-FFD-----GENNEHF-IPAVVEPSVGIERLFYALIVSSYQQEQLEGEMREVL 345 Query: 378 ECCLLGCPDITVLV 419 CP+ V++ Sbjct: 346 RLPFHLCPEQIVVL 359
>SUCC_BACHD (Q9KA20) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)| Length = 386 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Frame = +3 Query: 111 GDPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFG--PSAESSGHGKIPSLA 284 G+P D+GGG TAE ++ ++ + +E V F +IFG + G I + Sbjct: 281 GEPANFLDVGGGATAEKVTEAFK---IILSDESVKGIFVNIFGGIMKCDVIAEGVIQATK 337 Query: 285 ELQMSI 302 E+ +SI Sbjct: 338 EVGLSI 343
>MURC_PROMA (Q7VEJ1) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 472 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 100 VSGRATQSPTAILVGDTPRSRSPAVTGTITFLI 198 + G+A Q PTAI+ G P S A G FLI Sbjct: 136 ILGKANQDPTAIIGGIVPYYNSNAYVGKGKFLI 168
>COFH_METTH (O26911) FO synthase subunit 2 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) Length = 403 Score = 28.5 bits (62), Expect = 7.2 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 9/86 (10%) Frame = -1 Query: 314 SKIPNAHLKLCQRWYFAVPR*FRRGAKYVVESINYFLIIIKKV---IVPVTAGERLRG-- 150 S+ P+ HL + P GA+ ++ L I+K+ +P TA E L Sbjct: 169 SEFPDVHL------HSFSPMEVYYGAQNAELTVEEALKILKRAGLGSMPGTAAEILDDDV 222 Query: 149 ---VSPTKIAVGDWVALPET-HQLGL 84 + PTK++ G+WV + ET H++G+ Sbjct: 223 RAVICPTKLSTGEWVEVIETAHRVGI 248
>MOB3_RAT (Q9QYW3) Preimplantation protein 3 (Mps one binder kinase| activator-like 3) (Mob1 homolog 3) (Mob3) (Class II mMOB1) (Phocein) Length = 225 Score = 28.5 bits (62), Expect = 7.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = -3 Query: 297 SSEALPAMVFCRAQMIPQRGQICRRIHQLLSH 202 S++ P+ V + + + G +CRRI+++ SH Sbjct: 138 SNKYFPSRVSIKESSVAKLGSVCRRIYRIFSH 169
>MOB3_MOUSE (Q6PEB6) Preimplantation protein 3 (Mps one binder kinase| activator-like 3) (Mob1 homolog 3) (Mob3) (Class II mMOB1) Length = 225 Score = 28.5 bits (62), Expect = 7.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = -3 Query: 297 SSEALPAMVFCRAQMIPQRGQICRRIHQLLSH 202 S++ P+ V + + + G +CRRI+++ SH Sbjct: 138 SNKYFPSRVSIKESSVAKLGSVCRRIYRIFSH 169
>MOB3_HUMAN (Q9Y3A3) Preimplantation protein 3 (Mps one binder kinase| activator-like 3) (Mob1 homolog 3) (Mob3) (Class II mMOB1) (2C4D) Length = 225 Score = 28.5 bits (62), Expect = 7.2 Identities = 10/32 (31%), Positives = 20/32 (62%) Frame = -3 Query: 297 SSEALPAMVFCRAQMIPQRGQICRRIHQLLSH 202 S++ P+ V + + + G +CRRI+++ SH Sbjct: 138 SNKYFPSRVSIKESSVAKLGSVCRRIYRIFSH 169
>SYD_GLOVI (Q7NJA4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 595 Score = 28.5 bits (62), Expect = 7.2 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 143 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 P+++ GDW ALP++ QL L+ G R Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDR 211
>SYD_ANASP (Q8YUB6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 595 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = -1 Query: 227 VESINYFLIIIKKVIVPVTAGERLRGVSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 +E + F+ + ++ T V P+++ G+W ALP++ QL L+ G+ R Sbjct: 158 LEDVEGFIEVETPILTRSTPEGARDYVLPSRVNPGEWFALPQSPQLFKQILMVSGLDR 215
>PLS_STAAW (Q8NUV0) Putative surface protein MW2416 precursor| Length = 1371 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 1110 NPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 1163 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 982 NPLTGEKVGEGQPTEEITKQPIDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 1035 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 854 NPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 907 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 726 NPLTGEKVGEGQPTEEITKQPIDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 779 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 598 NPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 651 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 114 DPVTNSDLGGGYTAESLSRRYRDYNFLDYNEKVIDGFYDIFGPSAESSGHGKIP 275 +P+T +G G E ++++ D EK+ G DIF P+ + K+P Sbjct: 470 NPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVP 523
>SYD_SYNJB (Q2JMA8) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 601 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 143 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 P+++ G+W ALP++ QL L+ G+ R Sbjct: 194 PSRVNPGEWFALPQSPQLFKQLLMVAGVDR 223
>SYD_SYNJA (Q2JTZ2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 601 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 143 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 P+++ G+W ALP++ QL L+ G+ R Sbjct: 194 PSRVNPGEWFALPQSPQLFKQLLMVAGVDR 223
>SYD_ANAVT (Q3MGL3) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 614 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = -1 Query: 227 VESINYFLIIIKKVIVPVTAGERLRGVSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 54 +E + F+ + ++ T V P+++ G+W ALP++ QL L+ G+ R Sbjct: 177 LEDVEGFIEVETPILTRSTPEGARDYVLPSRVNPGEWFALPQSPQLFKQILMVSGMDR 234
>TRPE_NEIMC (Q9S358) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 491 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 267 KIPSLAELQMS-IGDLGYEVIVVDYKFDNALQEMKEVAECCLLGCPDITVLV 419 +IPSL +G GYE I Y F++ +K + LG PDI +++ Sbjct: 108 EIPSLPRFTGGLVGYFGYETI---YNFEHFAHRLKNTTKADPLGTPDILLML 156
>TRPE_NEIMB (P56995) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 491 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 267 KIPSLAELQMS-IGDLGYEVIVVDYKFDNALQEMKEVAECCLLGCPDITVLV 419 +IPSL +G GYE I Y F++ +K + LG PDI +++ Sbjct: 108 EIPSLPRFTGGLVGYFGYETI---YNFEHFAHRLKNTTKADPLGTPDILLML 156
>TRPE_NEIMA (Q9XAZ0) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 491 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 267 KIPSLAELQMS-IGDLGYEVIVVDYKFDNALQEMKEVAECCLLGCPDITVLV 419 +IPSL +G GYE I Y F++ +K + LG PDI +++ Sbjct: 108 EIPSLPRFTGGLVGYFGYETI---YNFEHFAHRLKNTTKADPLGTPDILLML 156
>RL2_CLOAB (Q97EI1) 50S ribosomal protein L2| Length = 277 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -1 Query: 185 IVPVTAGERLRGVSPTKIAVGDWVALPETHQLGLSNLLPV 66 +V GE+ ++PTK++VGD V + + N LP+ Sbjct: 93 LVVYADGEKRYIIAPTKLSVGDTVVSGPDADIKIGNALPI 132
>HYALP_RABIT (P38566) Hyaluronidase PH-20 precursor (EC 3.2.1.35) (Hyal-PH20)| (Sperm surface protein PH-20) (Sperm adhesion molecule 1) Length = 545 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +3 Query: 219 GFYDIFGPSAESSGHGKIPSLAELQMSIGDLGYEVI 326 G+Y P + HG+IP L LQ + L E++ Sbjct: 97 GYYPYIDPHTGAIVHGRIPQLGPLQQHLTKLRQEIL 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,197,276 Number of Sequences: 219361 Number of extensions: 1270324 Number of successful extensions: 4017 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3933 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4016 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
