ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38e05 |
|---|---|
| Clone Library Name | barley_pub |
>MC6ZB_XENLA (Q7ZY18) Zygotic DNA replication licensing factor mcm6-B (Zygotic| minichromosome maintenance protein 6-B) (zMCM6-B) (zMCM6b) Length = 825 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/98 (33%), Positives = 46/98 (46%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYV 267 P S A A DE A + + +F +FL+ F+ D E Y + E + E T+ V Sbjct: 6 PSQSAAAAAGTQLVKDEVAEKCQKLFQDFLEEFRGSDG-ELKYQSDAEELIRPERNTLLV 64 Query: 268 DFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVMEH 381 F + +FN L I EE+ R PYL A K F +H Sbjct: 65 SFVDLEQFNQQLATTIQEEFYRVYPYLCRAVKAFARDH 102
>MCM6_MOUSE (P97311) DNA replication licensing factor MCM6 (Mis5 homolog)| Length = 821 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/84 (34%), Positives = 44/84 (52%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 DE A + + +F++FL+ F+ D + E +R E T+ V FA + +FN L Sbjct: 20 DEVAEKCQKLFLDFLEEFQGSDGEIKYLQFAEELIRP-ERNTLVVSFADLEQFNQQLSTT 78 Query: 313 ISEEYLRFEPYLRNACKRFVMEHR 384 I EE+ R PYL A K FV + + Sbjct: 79 IQEEFYRVYPYLCRALKTFVKDRK 102
>MCM6_HUMAN (Q14566) DNA replication licensing factor MCM6 (P105MCM)| Length = 821 Score = 53.1 bits (126), Expect = 3e-07 Identities = 28/84 (33%), Positives = 44/84 (52%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 DE A + + +F++FL+ F+ D + + E +R E T+ V F + +FN L Sbjct: 20 DEVAEKCQKLFLDFLEEFQSSDGEIKYLQLAEELIRP-ERNTLVVSFVDLEQFNQQLSTT 78 Query: 313 ISEEYLRFEPYLRNACKRFVMEHR 384 I EE+ R PYL A K FV + + Sbjct: 79 IQEEFYRVYPYLCRALKTFVKDRK 102
>MCM6_SCHPO (P49731) DNA replication licensing factor mcm6 (Minichromosome| maintenance protein 6) Length = 892 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 10/91 (10%) Frame = +1 Query: 130 VDEKAARVENIFVEFLKRFKEPDAA----------EPFYDVEMEAMRSRESTTMYVDFAH 279 +D V F EFL F + A E +Y ++ + E T+YVD+ H Sbjct: 65 IDTTGESVREAFEEFLLSFSDDRVAGGDALPSASQEKYYVQQIHGLAMYEIHTVYVDYKH 124 Query: 280 VMRFNDVLQKAISEEYLRFEPYLRNACKRFV 372 + +NDVL AI E+Y RF P+L A ++ + Sbjct: 125 LTSYNDVLALAIVEQYYRFSPFLLRALQKLI 155
>MC6ZA_XENLA (Q498J7) Zygotic DNA replication licensing factor mcm6-A (Zygotic| minichromosome maintenance protein 6-A) (zMCM6-A) (zMCM6a) Length = 823 Score = 52.4 bits (124), Expect = 4e-07 Identities = 32/98 (32%), Positives = 46/98 (46%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYV 267 P S A A DE A + + +F +FL+ F+ D E Y + E + E T+ V Sbjct: 6 PSQSAAAAAGTQLVKDEVAEKCQKLFQDFLEEFQGSDG-ELKYQSDAEELIRPERNTLLV 64 Query: 268 DFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVMEH 381 F + +FN L I EE+ R PYL A + F +H Sbjct: 65 SFVDLEQFNQQLATTIQEEFYRVYPYLCRAVRAFARDH 102
>MCM6Z_XENTR (Q6P1V8) Zygotic DNA replication licensing factor mcm6 (Zygotic| minichromosome maintenance protein 6) (zMCM6) Length = 823 Score = 51.6 bits (122), Expect = 8e-07 Identities = 32/98 (32%), Positives = 46/98 (46%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYV 267 P S A A DE + + + +F +FL+ F+ D E Y + E + E T+ V Sbjct: 6 PSQSAAAAAGTQTVKDEVSEKCQKLFQDFLEEFRGSDG-ELKYQSDAEELIRPERNTLLV 64 Query: 268 DFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVMEH 381 F + +FN L I EE+ R PYL A K F +H Sbjct: 65 SFIDLEQFNQQLATTIQEEFYRVYPYLCRAVKAFARDH 102
>MCM6M_XENTR (Q28CM3) Maternal DNA replication licensing factor mcm6 (Maternal| minichromosome maintenance protein 6) (mMCM6) Length = 821 Score = 51.2 bits (121), Expect = 1e-06 Identities = 29/97 (29%), Positives = 47/97 (48%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYV 267 P + A + G F DE + + + +F+EFL+ K D + + E +R E T+ V Sbjct: 6 PATAGATDTAGQLFKDELSDKCQKLFLEFLEECKGKDGSNLYVSAAEELVRP-ERNTLVV 64 Query: 268 DFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVME 378 +F + +N L I EEY R P+L A + F + Sbjct: 65 NFTDIEYYNQQLATTIQEEYYRVYPHLCRAVRSFARQ 101
>MCM6_ANOGA (Q7Q0Q1) DNA replication licensing factor Mcm6| Length = 814 Score = 50.1 bits (118), Expect = 2e-06 Identities = 29/82 (35%), Positives = 43/82 (52%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 DE R + +F++FL+ FKE E Y +E + + + +T+ V F V +N L A Sbjct: 15 DEVGVRCQKLFLDFLEEFKED--GEIKYLKTVENLVNPDRSTLEVSFEDVENYNQTLATA 72 Query: 313 ISEEYLRFEPYLRNACKRFVME 378 I EEY R PYL + FV + Sbjct: 73 IIEEYYRIFPYLCQSVSNFVRD 94
>MCM6_YEAST (P53091) DNA replication licensing factor MCM6 (Minichromosome| maintenance protein 6) Length = 1017 Score = 48.9 bits (115), Expect = 5e-06 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFK----EPDAAEPFYDVEMEAMRSRESTTMYVDFAHV-MRFND 297 D +V F +FL+ F + E Y ++E M+ + T+Y+D+ H+ MR N Sbjct: 105 DVTGEKVREAFEQFLEDFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMRENG 164 Query: 298 VLQKAISEEYLRFEPYLRNACKRFVMEH 381 L AISE+Y RF +L+ +R V ++ Sbjct: 165 ALAMAISEQYYRFLAFLQKGLRRVVRKY 192
>MCM6M_XENLA (Q5FWY4) Maternal DNA replication licensing factor mcm6 (Maternal| minichromosome maintenance protein 6) (mMCM6) (xMCM6) Length = 821 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/84 (30%), Positives = 42/84 (50%) Frame = +1 Query: 127 FVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQ 306 F DE + + + +F+EFL+ K D + + E +R E T+ V+F + +N L Sbjct: 20 FKDELSDKCQKLFLEFLEECKGKDGSNLYVSAAEELIRP-ERNTLAVNFTDIEYYNQQLA 78 Query: 307 KAISEEYLRFEPYLRNACKRFVME 378 I EEY R P+L A + F + Sbjct: 79 TTIQEEYYRVYPHLCRAVRSFARQ 102
>MCM6_CAEBR (Q61J08) DNA replication licensing factor mcm-6| Length = 810 Score = 45.4 bits (106), Expect = 5e-05 Identities = 26/75 (34%), Positives = 39/75 (52%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 D RV+N F +FLK FK D E Y M+ + E T++VD H+ +F++ L Sbjct: 14 DVDGTRVQNEFSKFLKSFKG-DKNELQYKTAMKELVQPEKNTIFVDMQHLYKFSNNLATT 72 Query: 313 ISEEYLRFEPYLRNA 357 I +Y R P++ A Sbjct: 73 IELQYYRVYPFMCEA 87
>MCM6_CAEEL (P34647) DNA replication licensing factor mcm-6| Length = 810 Score = 42.7 bits (99), Expect = 4e-04 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 D RV+N F +FLK FK+ E Y M+ + E T++++ H+ +F++ L Sbjct: 14 DTDGTRVQNEFSKFLKSFKD-QKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATT 72 Query: 313 ISEEYLRFEPYLRNA 357 I +Y R P++ A Sbjct: 73 IELQYYRVYPFMCEA 87
>MCM6_DROME (Q9V461) DNA replication licensing factor Mcm6 (Minichromosome| maintenance 6 protein) (DmMCM6) Length = 817 Score = 42.7 bits (99), Expect = 4e-04 Identities = 25/82 (30%), Positives = 40/82 (48%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 DE R + +F +FL+ FKE E Y ++ S + T+ V F V +++ L A Sbjct: 15 DEVGIRAQKLFQDFLEEFKED--GEIKYTRPAASLESPDRCTLEVSFEDVEKYDQNLATA 72 Query: 313 ISEEYLRFEPYLRNACKRFVME 378 I EEY P+L + +V + Sbjct: 73 IIEEYYHIYPFLCQSVSNYVKD 94
>MCM6_DROPS (Q29JI9) DNA replication licensing factor Mcm6 (Minichromosome| maintenance 6 protein) Length = 815 Score = 39.7 bits (91), Expect = 0.003 Identities = 24/82 (29%), Positives = 39/82 (47%) Frame = +1 Query: 133 DEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKA 312 D+ R + +F +FL+ FKE E Y + S + T+ V F V +++ L A Sbjct: 15 DDVGIRTQKLFQDFLEEFKEN--GEIKYTRPAANLESPDRCTLEVSFEDVEKYDQNLATA 72 Query: 313 ISEEYLRFEPYLRNACKRFVME 378 I EEY P+L + +V + Sbjct: 73 IIEEYYHVYPFLCQSVSNYVKD 94
>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion| defective protein 3) Length = 1409 Score = 32.0 bits (71), Expect = 0.62 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = +1 Query: 1 PARNPCLPPRTRTPEPSPNPQTLV*IQKVPEGSPA 105 PA P +PPR P P NP L KVPEG+ A Sbjct: 962 PALPPPVPPREAPPIPKRNPPPLGAPPKVPEGARA 996
>CDC63_HALSA (Q9HMS3) Cell division control protein 6 homolog 3 (CDC6 homolog 3)| Length = 518 Score = 31.2 bits (69), Expect = 1.1 Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 7/122 (5%) Frame = +1 Query: 76 IQKVP-EGSPAMEAFGGFF-VDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRE 249 +++VP G P + FF + RV I ++ + + E + Y++ Sbjct: 223 MEQVPMTGWPTDRVYATFFDAVDYVERVAVIMLDEIDKLVEKSGDDTLYNLSRMNSELDN 282 Query: 250 STTMYVDFAHVMRFNDVL----QKAISEEYLRFEPYLRNACKRFVMEHRAG-ENRAPIIS 414 S + ++ ++F D L + ++ EE + F PY N R +++HR+ +A +S Sbjct: 283 SRVSIIGISNDLKFTDFLDPRVKSSLGEEEIVFPPYDANQL-RDILQHRSDVAFKADALS 341 Query: 415 DD 420 DD Sbjct: 342 DD 343
>AMPR_ENTCL (P05051) HTH-type transcriptional activator ampR| Length = 290 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%) Frame = +1 Query: 226 MEAMRSRESTTMYVDFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVMEHRA------ 387 + ++R+ E+ ++ F H +V AIS+ E +L C+ FV R Sbjct: 7 LNSLRAFEAAARHLSFTHAAIELNVTHSAISQHVKTLEQHLN--CQLFVRVSRGLMLTTE 64 Query: 388 GENRAPIISD 417 GEN P+++D Sbjct: 65 GENLLPVLND 74
>INHBB_BOVIN (P42917) Inhibin beta B chain precursor (Activin beta-B chain)| Length = 408 Score = 29.6 bits (65), Expect = 3.1 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +1 Query: 10 NPCLPPRTRTPEPSPNPQTLV*IQKVPEGSP-AMEAFGGFFVDEKAARVENIFVEFLKR 183 +P PP P+P P P P GS + GGF E+ RV+ F+E +KR Sbjct: 29 SPTPPPLPAAPQPPPPPPG------APGGSQDTCTSCGGFRRPEELGRVDGDFLEAVKR 81
>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein| CPn_1034/CP0818/CPj1034/CpB1074 precursor Length = 262 Score = 29.6 bits (65), Expect = 3.1 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = -1 Query: 135 VHEEAAERLHGRRTFWHLLDLDECLGIRGWLWRASARWEARVSGG 1 +HE A + L+ FW +LDLD+ L ++G + + W+++ G Sbjct: 28 IHEVAGDILYDEENFWLILDLDDTL-LQGGEALSHSIWKSKAIQG 71
>INHBB_HUMAN (P09529) Inhibin beta B chain precursor (Activin beta-B chain)| Length = 407 Score = 29.3 bits (64), Expect = 4.0 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +1 Query: 10 NPCLPPRTRTPEPSPNPQTLV*IQKVPEGSP-AMEAFGGFFVDEKAARVENIFVEFLKR 183 +P PP P P P P + P GS + GGF E+ RV+ F+E +KR Sbjct: 29 SPTPPPTPAAPPPPPPPGS-------PGGSQDTCTSCGGFRRPEELGRVDGDFLEAVKR 80
>GCY_ARBPU (P11528) Resact receptor precursor (Guanylate cyclase) (EC 4.6.1.2)| Length = 986 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +1 Query: 190 EPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKAIS 318 +PDAAEPF D+ R++++T +YV F D+ Q AIS Sbjct: 221 DPDAAEPFTDI---IQRTKKTTRIYVFFGD---SGDLRQFAIS 257
>SYR_COXBU (Q83A98) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 592 Score = 28.9 bits (63), Expect = 5.3 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +1 Query: 103 AMEAFGGFFVDEKAARVE--NIFVEFLKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFA 276 +M GG FV + R E N F ++PD F D+E+ +S E+ Y+ +A Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDF-DLELAKSQSNENPVYYIQYA 474 Query: 277 H 279 H Sbjct: 475 H 475
>YYAP1_HUMAN (Q9H869) YY1-associated protein 1 (Hepatocellular carcinoma| susceptibility protein) (Hepatocellular carcinoma-associated protein 2) Length = 796 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +1 Query: 1 PARNPCLPPRTRTPEPSPNPQTLV*IQKVPE---GSPAMEAFGGFFVDEKAAR 150 PA P +PP RT P QTL+ VP+ SPA F +V + ++ Sbjct: 526 PAALPAMPPEARTSFPLSESQTLLSSAPVPKVMMPSPASSMFRKPYVRRRPSK 578
>BCL9_DROME (Q961D9) Bcl-9 homolog (Protein legless)| Length = 1469 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%) Frame = +1 Query: 7 RNPCLPPRTRTPEPS-------PNPQTLV*IQKVPEGSPAMEAFG 120 R+ +P T++P PS P+P+T + +P SP+M+ G Sbjct: 772 RSASVPIATQSPNPSSPNNLSLPSPRTTAAVMGLPTNSPSMDGTG 816
>HME1_HUMAN (Q05925) Homeobox protein engrailed-1 (Hu-En-1)| Length = 392 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 5/50 (10%) Frame = +1 Query: 1 PARNPCLPPRTRTPE-----PSPNPQTLV*IQKVPEGSPAMEAFGGFFVD 135 P PCLPP P P P PQ L P+ + + FF+D Sbjct: 59 PPAAPCLPPLAHHPHLPPHPPPPPPQHLAAPAHQPQPAAQLHRTTNFFID 108
>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240| Length = 285 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEA 234 PE P +E GG V A R ++ + + + PD +YD+++ A Sbjct: 140 PEDVPRLETAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPHYYDLQLPA 188
>CWC27_EMENI (Q5AUG9) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)| Length = 558 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = +1 Query: 13 PCLPPRTRTPEPSPNPQTLV*IQKVPEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKE 192 P PP+ R P P Q + + PE SP+ F+ A +EN+ ++R Sbjct: 285 PSAPPKNRPKTPEPTKQLPLPNPESPERSPSPPPKQS-FLSRTNAEIENLKAS-MRRTAH 342 Query: 193 PDAAEPFYDVEMEAM 237 AAE +EAM Sbjct: 343 APAAETKPKSALEAM 357
>TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 815 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +1 Query: 7 RNPCLPPRTRTPEPSPNPQ 63 R+P PP T +PEP P P+ Sbjct: 13 RSPWQPPTTPSPEPEPEPE 31
>TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 815 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 10 NPCLPPRTRTPEPSPNPQ 63 NP PP T +PEP P P+ Sbjct: 14 NPWQPPTTPSPEPEPEPE 31
>DBP_HUMAN (Q10586) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) (TAXREB302) Length = 325 Score = 28.1 bits (61), Expect = 9.0 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 9/133 (6%) Frame = +1 Query: 22 PPRTRTPEPSPNPQTL--V*IQKVPEGSPAMEAFG-------GFFVDEKAARVENIFVEF 174 P RTP PSP P + + P +PA A G G + + V+ VE Sbjct: 142 PSPARTPAPSPGPGSCGSASPRSSPGHAPARAALGTASGHRAGLTSRDTPSPVDPDTVEV 201 Query: 175 LKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKAISEEYLRFEPYLRN 354 L F EPD A D+ + ++ E+ D + SEE L+ +P ++ Sbjct: 202 LMTF-EPDPA----DLALSSIPGHETF-------------DPRRHRFSEEELKPQPIMKK 243 Query: 355 ACKRFVMEHRAGE 393 A K V E + E Sbjct: 244 ARKIQVPEEQKDE 256
>DBP_BOVIN (Q32PF6) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) Length = 325 Score = 28.1 bits (61), Expect = 9.0 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 9/133 (6%) Frame = +1 Query: 22 PPRTRTPEPSPNPQTL--V*IQKVPEGSPAMEAFG-------GFFVDEKAARVENIFVEF 174 P RTP PSP P + + P +PA A G G + + V+ VE Sbjct: 142 PSPVRTPAPSPRPGSCGSASPRSSPGHAPARAALGAAGGHRAGLTSRDTPSPVDPDTVEV 201 Query: 175 LKRFKEPDAAEPFYDVEMEAMRSRESTTMYVDFAHVMRFNDVLQKAISEEYLRFEPYLRN 354 L F EPD A D+ + ++ E+ D + SEE L+ +P ++ Sbjct: 202 LMTF-EPDPA----DLALSSIPGHETF-------------DPRRHRFSEEELKPQPIMKK 243 Query: 355 ACKRFVMEHRAGE 393 A K V E + E Sbjct: 244 ARKIQVPEEQKDE 256
>SYK_BRUSU (P59225) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 551 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRES 252 PE +P ++A G+ A R N FV+ K+F+ PD DVE A+ + ++ Sbjct: 420 PENNPELDALVGY-----AIRYFNDFVKPTKKFRAPD------DVERAALEALDA 463
>SYK_BRUME (Q8YCM8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 551 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +1 Query: 88 PEGSPAMEAFGGFFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMRSRES 252 PE +P ++A G+ A R N FV+ K+F+ PD DVE A+ + ++ Sbjct: 420 PENNPELDALVGY-----AIRYFNDFVKPTKKFRAPD------DVERAALEALDA 463
>ZRF1_MOUSE (P54103) Zuotin-related factor 1| Length = 514 Score = 28.1 bits (61), Expect = 9.0 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 124 FFVDEKAARVENIFVEFLKRFKEPDAAEPFYDVEMEAMR---SRESTTMYVDFAHVMRFN 294 F +EKA + + R KE +A E E+EA+R +E + + Sbjct: 283 FKEEEKAKKEAEKKAKAEARRKEQEAKEKQRQAELEAVRLAKEKEEEEVRQQALLAKKEK 342 Query: 295 DVLQKAISEEYLRFEPYLRNACK 363 D+ +KAI +E + LRN+CK Sbjct: 343 DIQKKAIKKERQK----LRNSCK 361
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 22 PPRTRTPEPSPNPQTLV*IQKVPEGSPAM 108 PP+T+TP+P+P P +Q P PA+ Sbjct: 205 PPQTQTPQPNPPP-----VQATPHPFPAV 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,561,048 Number of Sequences: 219361 Number of extensions: 886001 Number of successful extensions: 4109 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3744 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4067 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
