Clone Name | bastl38d12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 315 bits (159), Expect = 7e-83 Identities = 257/290 (88%) Strand = Plus / Minus Query: 179 aaacacgcgttctctttctcgcccgtctatgctcagaatgctccaagcaggctgcctttc 238 ||||| || |||||||||||||||||||||||| | |||||||| || || || ||| Sbjct: 25589794 aaacatgcattctctttctcgcccgtctatgctgacaatgctccgtcaagactccccttc 25589735 Query: 239 caagaacttgtgtttggcgttgggatgaaagcatgccatgtgttccagtttgtcctccgg 298 ||||||||| | |||| |||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 25589734 caagaacttattgttggtgttgggatgaaagcgtgccatgtgcttcagtttgtcctccgg 25589675 Query: 299 cttgcctttgttctttcagtctggctcatgattatccccttcattacctactggatatgg 358 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 25589674 cttgcctttgttctttcagtttggctcatgattatccccttcatcacttactggatatgg 25589615 Query: 359 cggttaacatttgtgagaagtctcggtgaagcacanaggctgttcttgagtcacgtcagc 418 |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 25589614 aggttaacattcgtgagaagtcttggtgaagcacagaggctattcttgagtcatatcagc 25589555 Query: 419 gctcagttgatcctcagtgattgcctacatggatttcttctctcagctat 468 |||||||||||||| ||||| || ||||||| ||||||||||||||||| Sbjct: 25589554 gctcagttgatcctaagtgactgtttacatggttttcttctctcagctat 25589505 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 20 gaggaggacggggacgtctgccggatctgccgcaaccgcggcgacgacgagcacccgctg 79 |||||||| |||||||| |||||||||||||| |||| || ||||||||||||||||| Sbjct: 25590793 gaggaggaaggggacgtgtgccggatctgccggaacccgggggacgacgagcacccgctc 25590734 Query: 80 cgctacccctgcgcatgcagcggcagcatcaagttcgtccaccaggactgcctcctccag 139 || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 25590733 cggtacccgtgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctccag 25590674 Query: 140 tggcccgaccacagcgactcccgccagtgcgaggt 174 |||| |||||||||| ||||||||||||||||||| Sbjct: 25590673 tggctcgaccacagcaactcccgccagtgcgaggt 25590639 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 28931578 gacgacgacgacgacgacgaggagga 28931603 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 6769298 gacgacgacgacgacgacgaggagg 6769322 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||| |||||||||||||||| Sbjct: 4216660 gacgacgacgacgacgaggaggacg 4216636 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 ||||||||| |||||||||||||| Sbjct: 22434317 cgacgacgacgacgacgaggagga 22434340
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 315 bits (159), Expect = 7e-83 Identities = 257/290 (88%) Strand = Plus / Minus Query: 179 aaacacgcgttctctttctcgcccgtctatgctcagaatgctccaagcaggctgcctttc 238 ||||| || |||||||||||||||||||||||| | |||||||| || || || ||| Sbjct: 108111 aaacatgcattctctttctcgcccgtctatgctgacaatgctccgtcaagactccccttc 108052 Query: 239 caagaacttgtgtttggcgttgggatgaaagcatgccatgtgttccagtttgtcctccgg 298 ||||||||| | |||| |||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 108051 caagaacttattgttggtgttgggatgaaagcgtgccatgtgcttcagtttgtcctccgg 107992 Query: 299 cttgcctttgttctttcagtctggctcatgattatccccttcattacctactggatatgg 358 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 107991 cttgcctttgttctttcagtttggctcatgattatccccttcatcacttactggatatgg 107932 Query: 359 cggttaacatttgtgagaagtctcggtgaagcacanaggctgttcttgagtcacgtcagc 418 |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 107931 aggttaacattcgtgagaagtcttggtgaagcacagaggctattcttgagtcatatcagc 107872 Query: 419 gctcagttgatcctcagtgattgcctacatggatttcttctctcagctat 468 |||||||||||||| ||||| || ||||||| ||||||||||||||||| Sbjct: 107871 gctcagttgatcctaagtgactgtttacatggttttcttctctcagctat 107822 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 20 gaggaggacggggacgtctgccggatctgccgcaaccgcggcgacgacgagcacccgctg 79 |||||||| |||||||| |||||||||||||| |||| || ||||||||||||||||| Sbjct: 109110 gaggaggaaggggacgtgtgccggatctgccggaacccgggggacgacgagcacccgctc 109051 Query: 80 cgctacccctgcgcatgcagcggcagcatcaagttcgtccaccaggactgcctcctccag 139 || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 109050 cggtacccgtgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctccag 108991 Query: 140 tggcccgaccacagcgactcccgccagtgcgaggt 174 |||| |||||||||| ||||||||||||||||||| Sbjct: 108990 tggctcgaccacagcaactcccgccagtgcgaggt 108956
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 315 bits (159), Expect = 7e-83 Identities = 257/290 (88%) Strand = Plus / Minus Query: 179 aaacacgcgttctctttctcgcccgtctatgctcagaatgctccaagcaggctgcctttc 238 ||||| || |||||||||||||||||||||||| | |||||||| || || || ||| Sbjct: 13239 aaacatgcattctctttctcgcccgtctatgctgacaatgctccgtcaagactccccttc 13180 Query: 239 caagaacttgtgtttggcgttgggatgaaagcatgccatgtgttccagtttgtcctccgg 298 ||||||||| | |||| |||||||||||||| ||||||||| | ||||||||||||||| Sbjct: 13179 caagaacttattgttggtgttgggatgaaagcgtgccatgtgcttcagtttgtcctccgg 13120 Query: 299 cttgcctttgttctttcagtctggctcatgattatccccttcattacctactggatatgg 358 |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 13119 cttgcctttgttctttcagtttggctcatgattatccccttcatcacttactggatatgg 13060 Query: 359 cggttaacatttgtgagaagtctcggtgaagcacanaggctgttcttgagtcacgtcagc 418 |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct: 13059 aggttaacattcgtgagaagtcttggtgaagcacagaggctattcttgagtcatatcagc 13000 Query: 419 gctcagttgatcctcagtgattgcctacatggatttcttctctcagctat 468 |||||||||||||| ||||| || ||||||| ||||||||||||||||| Sbjct: 12999 gctcagttgatcctaagtgactgtttacatggttttcttctctcagctat 12950 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 20 gaggaggacggggacgtctgccggatctgccgcaaccgcggcgacgacgagcacccgctg 79 |||||||| |||||||| |||||||||||||| |||| || ||||||||||||||||| Sbjct: 14238 gaggaggaaggggacgtgtgccggatctgccggaacccgggggacgacgagcacccgctc 14179 Query: 80 cgctacccctgcgcatgcagcggcagcatcaagttcgtccaccaggactgcctcctccag 139 || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14178 cggtacccgtgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctccag 14119 Query: 140 tggcccgaccacagcgactcccgccagtgcgaggt 174 |||| |||||||||| ||||||||||||||||||| Sbjct: 14118 tggctcgaccacagcaactcccgccagtgcgaggt 14084
>dbj|AK102470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094G05, full insert sequence Length = 816 Score = 204 bits (103), Expect = 2e-49 Identities = 142/155 (91%) Strand = Plus / Plus Query: 20 gaggaggacggggacgtctgccggatctgccgcaaccgcggcgacgacgagcacccgctg 79 |||||||| |||||||| |||||||||||||| |||| || ||||||||||||||||| Sbjct: 204 gaggaggaaggggacgtgtgccggatctgccggaacccgggggacgacgagcacccgctc 263 Query: 80 cgctacccctgcgcatgcagcggcagcatcaagttcgtccaccaggactgcctcctccag 139 || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 264 cggtacccgtgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctccag 323 Query: 140 tggcccgaccacagcgactcccgccagtgcgaggt 174 |||| |||||||||| ||||||||||||||||||| Sbjct: 324 tggctcgaccacagcaactcccgccagtgcgaggt 358
>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence Length = 40624 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacgt 36 ||||||||||||||||||||||| |||| |||||| Sbjct: 15148 gacgacgacgaggacgacgaggacgacgaggacgt 15182
>emb|BX014500.1|CNS08JCO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 886 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||||||| ||||||| ||||| Sbjct: 819 gacgacgacgaggacgacgacgaggacgaggacg 852
>ref|XM_314082.2| Anopheles gambiae str. PEST ENSANGP00000010404 (ENSANGG00000007915), partial mRNA Length = 972 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||||||||| Sbjct: 419 gacgacgacgaggacgacgaggagga 394
>ref|XM_309211.2| Anopheles gambiae str. PEST ENSANGP00000016101 (ENSANGG00000013612), partial mRNA Length = 882 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||||||| ||||||| ||||| Sbjct: 817 gacgacgacgaggacgacgacgaggacgaggacg 850
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||||| Sbjct: 12705433 gacgacgacgaggacgacgaggagg 12705457 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 33897755 gacgacgacgaagacgacgaggagga 33897730 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 17550891 gacgacgatgaggacgacgaggagga 17550916 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 |||||||| |||||||||||||||| Sbjct: 9269661 gacgacgaggaggacgacgaggagg 9269637
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||||| Sbjct: 12702196 gacgacgacgaggacgacgaggagg 12702220 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 33988227 gacgacgacgaagacgacgaggagga 33988202 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 17544432 gacgacgatgaggacgacgaggagga 17544457 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 |||||||| |||||||||||||||| Sbjct: 9267494 gacgacgaggaggacgacgaggagg 9267470
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 ||||||||||||||||||||||||| Sbjct: 21395259 gacgacgaggacgacgaggaggacg 21395283 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 32682116 gacgacgacgaggacgaggaggagga 32682091 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggagga 27 |||||| ||||||||||||||||| Sbjct: 34430319 cgacgaggaggacgacgaggagga 34430296 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 |||||||||||||||||| ||||| Sbjct: 33565910 cgacgacgaggacgacgacgagga 33565933 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||||||||| ||||| |||| Sbjct: 30891481 gacgacgacgaggacgaggaggatgacg 30891508 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 8362893 gacgacgacgaggacgacga 8362912 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggaggac 28 |||||||||||| |||||||| |||||| Sbjct: 4829474 tgacgacgacgacgacgacgacgaggac 4829501
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||||| Sbjct: 59886 gacgacgacgaggacgacgaggagg 59910
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||||| Sbjct: 63074 gacgacgacgaggacgacgaggagg 63050
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 ||||||||||||||||||||||||| Sbjct: 55212 gacgacgaggacgacgaggaggacg 55236
>gb|AC166487.6| Mus musculus chromosome 1, clone RP23-298A7, complete sequence Length = 187404 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||||||||||| Sbjct: 114795 gacgacgacgacgacgacgaggaggacg 114768 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||| ||||||||||||| Sbjct: 114786 gacgacgacgaggaggacgaggaggacg 114759
>ref|XM_954441.1| Neurospora crassa OR74A hypothetical protein (NCU02406.1) partial mRNA Length = 2790 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 967 gacgacgacgaggacgacgacgaggacg 994
>ref|XM_331181.1| Neurospora crassa OR74A hypothetical protein (NCU02406.1) partial mRNA Length = 2790 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 967 gacgacgacgaggacgacgacgaggacg 994
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggaggacggggacg 35 ||||||||||||||||||||| |||| ||||| Sbjct: 127545 cgacgacgaggacgacgaggacgacgaggacg 127576 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggaggacggggacg 35 ||||||||||||||||||||| |||| ||||| Sbjct: 115468 cgacgacgaggacgacgaggacgacgaggacg 115437 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| |||| Sbjct: 127591 gacgacgaggacgacgaggacgacg 127615 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| |||| Sbjct: 127555 gacgacgaggacgacgaggacgacg 127579 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| |||| Sbjct: 115458 gacgacgaggacgacgaggacgacg 115434 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| |||| Sbjct: 115422 gacgacgaggacgacgaggacgacg 115398
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacgggga 33 ||||| |||||||||||||| ||||||||||| Sbjct: 44970 gacgaagacgaggacgacgaagaggacgggga 45001
>ref|XM_858188.1| PREDICTED: Canis familiaris hypothetical protein LOC608940 (LOC608940), mRNA Length = 702 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 608 gacgacgacgaggacgacgacgaggacg 581 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggac 34 |||||||||||||||||||| || |||| |||| Sbjct: 566 gacgacgacgaggacgacgacgacgacgaggac 534 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 596 gacgacgacgaggacgacga 577 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 581 gacgacgacgaggacgacga 562
>ref|XM_861216.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 8 (LOC484478), mRNA Length = 1817 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1636 gacgaggacgaggacgacgaggaggacg 1609
>ref|XM_861199.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 7 (LOC484478), mRNA Length = 1736 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1519 gacgaggacgaggacgacgaggaggacg 1492
>ref|XM_861184.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 6 (LOC484478), mRNA Length = 1695 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1603 gacgaggacgaggacgacgaggaggacg 1576
>ref|XM_861169.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 5 (LOC484478), mRNA Length = 1752 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1660 gacgaggacgaggacgacgaggaggacg 1633
>ref|XM_861153.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 4 (LOC484478), mRNA Length = 1719 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1627 gacgaggacgaggacgacgaggaggacg 1600
>ref|XM_861140.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 3 (LOC484478), mRNA Length = 1713 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1621 gacgaggacgaggacgacgaggaggacg 1594
>ref|XM_847636.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 2 (LOC484478), mRNA Length = 1932 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 1684 gacgaggacgaggacgacgaggaggacg 1657
>ref|XM_541592.2| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 1 (LOC484478), mRNA Length = 2285 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||||||||||| Sbjct: 2174 gacgaggacgaggacgacgaggaggacg 2147
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 47703 gacgacgacgaggacgacgacgaggacg 47676 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||| ||||||| Sbjct: 47730 gacgaggacgaggacgacgacgaggacg 47703 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 47718 gacgacgacgaggacgacga 47699 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 47691 gacgacgacgaggacgacga 47672
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgagga 24 |||||||||||||||||||||||| Sbjct: 923112 tgacgacgacgaggacgacgagga 923135
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 cgacgaggacgacgaggaggacgg 30 |||||||||||||||||||||||| Sbjct: 22277 cgacgaggacgacgaggaggacgg 22300
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacggggacg 35 ||||||||||||||||| |||||||||| Sbjct: 4064443 gacgaggacgacgaggacgacggggacg 4064470
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 1177163 gacgacgacgaggacgacgacgaggacg 1177190 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 1177175 gacgacgacgaggacgacga 1177194
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 8 gacgaggacgacgaggaggacggggacg 35 |||||||| ||||||||||||||||||| Sbjct: 127839 gacgaggaggacgaggaggacggggacg 127812 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacggggacg 35 |||||||| ||||||||||||||||||| Sbjct: 116763 gacgaggaggacgaggaggacggggacg 116790 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||| ||||||||||||| Sbjct: 138274 gacgaggacgaggaggacgaggaggacg 138247 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 gacgaggacgacgaggaggacggggacg 35 |||||||| ||||||||||||| ||||| Sbjct: 138259 gacgaggaggacgaggaggacgaggacg 138232 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacggggacg 35 |||||||| ||||||||||||| ||||| Sbjct: 106343 gacgaggaggacgaggaggacgaggacg 106370 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||| ||||||||||||| Sbjct: 106328 gacgaggacgaggaggacgaggaggacg 106355
>ref|XM_393999.2| PREDICTED: Apis mellifera similar to ENSANGP00000025275 (LOC410520), mRNA Length = 1221 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||||||||||| Sbjct: 131 gacgacgacgacgacgacgaggaggacg 104
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 cgacgaggacgacgaggaggacgg 30 |||||||||||||||||||||||| Sbjct: 20919054 cgacgaggacgacgaggaggacgg 20919077 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggagga 27 |||||||||| |||||||||||||| Sbjct: 34742131 acgacgacgatgacgacgaggagga 34742155 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 33248528 gacgacgacgacgacgacgaggagg 33248552 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 gaggacgacgaggaggacggggacg 35 ||||| ||||||||||||||||||| Sbjct: 29912441 gaggaggacgaggaggacggggacg 29912417 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgag 22 ||||||||||||||||||||| Sbjct: 24446786 gacgacgacgaggacgacgag 24446806 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 30110197 gacgacgacgacgacgacgaggag 30110220 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 30049494 gacgacgacgacgacgacgaggag 30049517 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||| ||||||| Sbjct: 14317089 gacgacgacgacgacgacgacgaggacg 14317062
>ref|NM_211316.1| Eremothecium gossypii AFR414Wp (AFR414W), mRNA Length = 819 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| ||||||| Sbjct: 322 gacgacgacgaggacgacgacgaggacg 349 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 334 gacgacgacgaggacgacga 353
>emb|AL663048.12| Mouse DNA sequence from clone RP23-166N12 on chromosome X, complete sequence Length = 234817 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||||||||||| Sbjct: 85917 gacgacgaggaggacgacgaggaggacg 85944 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||||||||||| Sbjct: 85881 gacgacgaggaggacgacgaggaggacg 85908 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||||||||||| Sbjct: 85812 gacgacgaagaggacgacgaggaggacg 85839 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||||||||||| Sbjct: 85746 gacgacgaggaggacgacgaggaggacg 85773 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||||||||||| Sbjct: 85734 gacgacgaggaggacgacgaggaggacg 85761 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggagga 27 ||||||||||||||||||||||| Sbjct: 85857 gacgacgaggacgacgaggagga 85879 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 85758 gacgacgaggaggacgacgaggagga 85783 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacg 29 |||||||||||||||||||||| Sbjct: 85728 gacgaggacgacgaggaggacg 85749 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 ||||||||||| ||||||||||||| Sbjct: 85824 gacgacgaggaggacgaggaggacg 85848 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacggggacg 35 ||||||||||| |||||||||| ||||| Sbjct: 86025 gacgaggacgaggaggaggacgaggacg 86052 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| || ||||||||||||||||||| Sbjct: 85905 gacgaggaggaggacgacgaggaggacg 85932 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| || ||||||||||||||||||| Sbjct: 85869 gacgaggaggaggacgacgaggaggacg 85896 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||| ||||||||||| ||||||| Sbjct: 85800 gacgacgaggaggacgacgaagaggacg 85827
>dbj|D00676.1|SH1RSP40 Suid herpesvirus 1 (strain KA) gene for ORF for RSp40, protein kinase, glycoprotein X, partial and complete cds Length = 4008 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacggggacg 35 |||||||| ||||||||||||||||||| Sbjct: 1354 gacgaggaggacgaggaggacggggacg 1381
>ref|XM_483028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 420 tgacgacgacgacgacgacgaggagga 446
>ref|XM_883416.1| PREDICTED: Bos taurus hypothetical protein LOC619148 (LOC619148), partial mRNA Length = 236 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggagga 27 ||||||||||||||||||||||| Sbjct: 117 gacgacgaggacgacgaggagga 139
>gb|AC092222.2| Drosophila melanogaster clone BACR16I01, complete sequence Length = 165697 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 93602 gacgacgacgacgacgacgaggaggac 93628
>ref|XM_613602.2| PREDICTED: Bos taurus similar to serine/arginine repetitive matrix 2 (LOC534002), mRNA Length = 1111 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggagga 27 ||||||||||||||||||||||| Sbjct: 164 gacgacgaggacgacgaggagga 142
>ref|XM_323700.1| Neurospora crassa OR74A hypothetical protein (NCU04348.1) partial mRNA Length = 3483 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||| |||||||||||||||||||| Sbjct: 1509 tgacgatgacgaggacgacgaggagga 1535
>ref|XM_951236.1| Neurospora crassa OR74A hypothetical protein (NCU04348.1) partial mRNA Length = 3483 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||| |||||||||||||||||||| Sbjct: 1509 tgacgatgacgaggacgacgaggagga 1535
>ref|XM_959887.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggagga 27 ||||||||||||||||||||||| Sbjct: 2192 gacgacgaggacgacgaggagga 2170
>ref|XM_330556.1| Neurospora crassa OR74A hypothetical protein (NCU03121.1) partial mRNA Length = 2727 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggagga 27 ||||||||||||||||||||||| Sbjct: 2192 gacgacgaggacgacgaggagga 2170
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggag 25 ||||||||||||||||||||||| Sbjct: 119172 acgacgacgaggacgacgaggag 119194
>ref|XM_534089.2| PREDICTED: Canis familiaris similar to HMT1 hnRNP methyltransferase-like 3, transcript variant 1 (LOC476887), mRNA Length = 1864 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacgggg 32 ||||||||||||||||| || |||||||||| Sbjct: 217 gacgacgacgaggacgaggacgaggacgggg 247
>emb|AL033125.1|DMSEG0007 Drosophila melanogaster sequence EG0007: concatenation of cosmids 30D3:40623-16930, 65G3:42474-1 Length = 66168 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 43332 acgacgacgatgacgacgaggaggacg 43306
>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165928 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 70752 acgacgacgatgacgacgaggaggacg 70726
>gb|AY118544.1| Drosophila melanogaster LD28992 full insert cDNA Length = 2534 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 2015 acgacgacgatgacgacgaggaggacg 2041
>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172784 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 105762 acgacgacgatgacgacgaggaggacg 105736
>ref|NM_131924.2| Drosophila melanogaster CG4857-RB (CG4857), mRNA Length = 6489 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 5498 acgacgacgatgacgacgaggaggacg 5524
>ref|NM_001014455.1| Drosophila melanogaster PNUTS CG33526-RB, transcript variant B (PNUTS), mRNA Length = 2644 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 1503 gacgacgacgacgacgacgaggaggac 1477
>ref|NM_001014454.1| Drosophila melanogaster PNUTS CG33526-RA, transcript variant A (PNUTS), mRNA Length = 2734 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 1593 gacgacgacgacgacgacgaggaggac 1567
>ref|NM_001014453.1| Drosophila melanogaster PNUTS CG33526-RD, transcript variant D (PNUTS), mRNA Length = 4831 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 2291 gacgacgacgacgacgacgaggaggac 2265
>ref|NM_001014452.1| Drosophila melanogaster PNUTS CG33526-RC, transcript variant C (PNUTS), mRNA Length = 2708 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 1567 gacgacgacgacgacgacgaggaggac 1541
>gb|AY061610.1| Drosophila melanogaster SD07532 full length cDNA Length = 2641 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 1485 gacgacgacgacgacgacgaggaggac 1459
>gb|AY061372.1| Drosophila melanogaster LD29423 full length cDNA Length = 5914 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 4908 acgacgacgatgacgacgaggaggacg 4934
>dbj|AK169543.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089N23 product:sperm specific antigen 2, full insert sequence Length = 5270 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 258 gacgaggacgaggacgacgaggaggac 284
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgagga 24 ||||||||||||||||||||||| Sbjct: 2645638 gacgacgacgaggacgacgagga 2645660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 2915972 gacgacgacgaggacgacga 2915953
>emb|BX931485.2| Gallus gallus finished cDNA, clone ChEST398j6 Length = 949 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgagga 24 ||||||||||||||||||||||| Sbjct: 162 gacgacgacgaggacgacgagga 184 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||| ||||||||||| |||| ||||| Sbjct: 153 gacgacgacgacgacgacgaggacgacgaggacg 186 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||||||||| |||||| Sbjct: 282 gacgacgacgaggacgaggaggag 305
>emb|AJ580980.1|DME580980 Drosophila melanogaster mRNA for PNUTS protein (PNUTSDm gene), short isoform Length = 2619 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 1503 gacgacgacgacgacgacgaggaggac 1477
>emb|AJ580979.1|DME580979 Drosophila melanogaster mRNA for PNUTS protein (PNUTSDm gene), long isoform Length = 4844 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 2291 gacgacgacgacgacgacgaggaggac 2265
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||||||||| |||||||| Sbjct: 25852381 tgacgacgacgaggacgaggaggagga 25852407 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 4109974 tgacgacgacgacgacgacgaggagga 4109948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgag 22 ||||||||||||||||||||| Sbjct: 23339610 gacgacgacgaggacgacgag 23339630 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacgg 30 ||||||||||||||||| |||||| |||| Sbjct: 20777039 gacgacgacgaggacgaggaggagcacgg 20777067 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 ||||||||| |||||||||||||| Sbjct: 4746145 cgacgacgacgacgacgaggagga 4746168 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 2593733 gacgacgacgacgacgacgaggag 2593756
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 23944945 tgacgacgacgacgacgacgaggagga 23944971 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 26760022 gacgacgacgacgacgacgaggag 26759999 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacgggga 33 |||||||||||||| || |||||||| ||||| Sbjct: 17897088 gacgacgacgaggaggaggaggaggaggggga 17897057 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 11096466 gacgacgacgacgacgacgaggag 11096443
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||| Sbjct: 17701604 cgacgacgaggacgacgaggagg 17701582 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacgggg 32 |||||||||| |||||||||||||| |||| Sbjct: 28264054 acgacgacgacgacgacgaggaggaggggg 28264083
>ref|XM_230036.3| PREDICTED: Rattus norvegicus sperm specific antigen 2 (predicted) (Ssfa2_predicted), mRNA Length = 4848 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 1048 gacgaggacgaggacgacgaggaggac 1074
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||| Sbjct: 105637 cgacgacgaggacgacgaggagg 105615
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||| Sbjct: 6357 cgacgacgaggacgacgaggagg 6335
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 78096 tgacgacgacgacgacgacgaggagga 78122
>dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139G05, full insert sequence Length = 1182 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||||||||| |||||||| Sbjct: 32 tgacgacgacgaggacgaggaggagga 6
>dbj|AB120565.1| Mus musculus mRNA for KRAP, complete cds Length = 3759 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 142 gacgaggacgaggacgacgaggaggac 168
>ref|XM_316230.2| Anopheles gambiae str. PEST ENSANGP00000017684 (ENSANGG00000015195), partial mRNA Length = 1734 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgagga 24 ||||||||||||||||||||||| Sbjct: 530 gacgacgacgaggacgacgagga 508
>dbj|AK110100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H07, full insert sequence Length = 2240 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgagga 24 ||||||||||||||||||||||| Sbjct: 1699 gacgacgacgaggacgacgagga 1721
>dbj|AK072721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134P18, full insert sequence Length = 2215 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagg 26 ||||||||||||||||||||||| Sbjct: 130 cgacgacgaggacgacgaggagg 152
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 135039 gacgacgacgaagacgacgaggaggac 135065
>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the complete sequence Length = 308447 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 261156 gacgacgacgacgacgacgaggaggac 261130
>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete sequence Length = 296227 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacg 29 |||||||||| |||||||||||||||| Sbjct: 32314 acgacgacgatgacgacgaggaggacg 32340
>dbj|AB093303.1| Mus musculus mRNA for mKIAA1927 protein Length = 4966 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 132 gacgaggacgaggacgacgaggaggac 158
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||||||||| |||||||| Sbjct: 25780557 tgacgacgacgaggacgaggaggagga 25780583 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 4109961 tgacgacgacgacgacgacgaggagga 4109935 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgag 22 ||||||||||||||||||||| Sbjct: 23267801 gacgacgacgaggacgacgag 23267821 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacgg 30 ||||||||||||||||| |||||| |||| Sbjct: 20703253 gacgacgacgaggacgaggaggagcacgg 20703281 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 ||||||||| |||||||||||||| Sbjct: 4746126 cgacgacgacgacgacgaggagga 4746149 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||| |||||||||||| Sbjct: 2593677 gacgacgacgacgacgacgaggag 2593700
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||||||||| |||||||| Sbjct: 73832 tgacgacgacgaggacgaggaggagga 73858
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 tgacgacgacgaggacgacgaggagga 27 |||||||||||| |||||||||||||| Sbjct: 52370 tgacgacgacgacgacgacgaggagga 52344
>gb|AC004546.1|AC004546 Drosophila melanogaster DNA sequence (P1s DS02684 (D134) and DS00269 (D131)), complete sequence Length = 102389 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||||||||| ||||||||||||||| Sbjct: 44663 gacgacgacgacgacgacgaggaggac 44689
>ref|NM_080558.3| Mus musculus sperm specific antigen 2 (Ssfa2), mRNA Length = 3759 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 142 gacgaggacgaggacgacgaggaggac 168
>emb|AL928770.1| Mouse DNA sequence from clone RP23-20E18 on chromosome 2, complete sequence Length = 87095 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggac 28 ||||| ||||||||||||||||||||| Sbjct: 84200 gacgaggacgaggacgacgaggaggac 84226
>ref|NM_188582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 586 gacgacgacgacgacgacgaggagga 561
>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence Length = 40909 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||||| |||||| Sbjct: 16358 gacgacgacgaggacgacggggagga 16383
>ref|XM_512241.1| PREDICTED: Pan troglodytes similar to methyl-CpG binding domain protein 3 (LOC455554), mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 852 gacgacgacgaggaagacgaggagga 877
>ref|XM_470094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 187 gacgacgacgaagacgacgaggagga 212
>ref|XM_468037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 727 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 586 gacgacgacgaggacgaggaggagga 611
>ref|NM_001031097.1| Gallus gallus RAB10, member RAS oncogene family (RAB10), mRNA Length = 3247 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 230 gacgacgacgacgacgacgaggagga 205
>ref|XM_468758.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2377 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 442 gacgacgatgaggacgacgaggagga 467
>ref|XM_515281.1| PREDICTED: Pan troglodytes similar to Transcription factor SOX-11 (LOC459004), mRNA Length = 1188 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 559 gacgacgacgacgacgacgaggagga 584
>gb|AC124637.10| Mus musculus chromosome 15, clone RP23-458B6, complete sequence Length = 200607 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 118388 gacgacgacgacgacgacgaggagga 118413
>gb|AY023461.1| Oryza sativa microsatellite MRG5786 containing (TCG)X8, closest to marker R665, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 120 gacgacgacgacgacgacgaggagga 95
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 12852 gacgacgatgaggacgacgaggagga 12827
>ref|XM_864745.1| PREDICTED: Bos taurus similar to zinc finger protein 422 (predicted) (LOC613703), mRNA Length = 1155 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||| ||||| Sbjct: 1081 gacgacgacgaggacgacgacgagga 1106
>ref|XM_430347.1| PREDICTED: Gallus gallus hypothetical gene supported by BX931485 (LOC425988), partial mRNA Length = 539 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||| |||||||| ||||||| ||||| Sbjct: 319 gacgacgacgacgacgacgacgaggacgaggacg 352 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggag 25 ||||||||||||||||| |||||| Sbjct: 469 gacgacgacgaggacgaggaggag 492 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||||||||| || ||||||| Sbjct: 442 gacgacgacgaggacgaggacgaggacg 469
>ref|XM_953462.1| Neurospora crassa OR74A hypothetical protein (NCU09051.1) partial mRNA Length = 3411 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgagga 24 |||||||||||||||||||||| Sbjct: 2104 acgacgacgaggacgacgagga 2083 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 1676 gacgacgacgaggacgacga 1657
>ref|XM_954367.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||| ||||| Sbjct: 262 gacgacgacgaggacgacgacgagga 287 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||| ||||||| Sbjct: 250 gacgaggacgaggacgacgacgaggacg 277
>ref|XM_958091.1| Neurospora crassa OR74A hypothetical protein (NCU08424.1) partial mRNA Length = 2544 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 2241 gacgacgaggaggacgacgaggagga 2266
>ref|XM_325756.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||| ||||| Sbjct: 262 gacgacgacgaggacgacgacgagga 287 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||| |||||||||||||| ||||||| Sbjct: 250 gacgaggacgaggacgacgacgaggacg 277
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 31831 gacgacgacgaggaggacgaggagga 31856
>ref|XM_329469.1| Neurospora crassa OR74A hypothetical protein (NCU08424.1) partial mRNA Length = 2544 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 2241 gacgacgaggaggacgacgaggagga 2266
>ref|XM_331442.1| Neurospora crassa OR74A hypothetical protein (NCU09051.1) partial mRNA Length = 3411 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgagga 24 |||||||||||||||||||||| Sbjct: 2104 acgacgacgaggacgacgagga 2083 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 1676 gacgacgacgaggacgacga 1657
>ref|XM_871210.1| PREDICTED: Bos taurus similar to C-jun-amino-terminal kinase interacting protein 2 (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase scaffold protein 2) (Islet-brain-2) (IB-2) (Mitogen-activated protein kinase 8-interacting protein 2) (LOC618893), mRNA Length = 3086 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 1411 gacgacgacgaggacgaagaggagga 1436
>ref|XM_867772.1| PREDICTED: Bos taurus similar to homeobox protein A7 (LOC615851), mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||| || |||||||||||||||| ||||| Sbjct: 610 gacgacgaggacgacgacgaggaggacgaggacg 643 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 |||||||||||||| |||||||| |||| Sbjct: 619 gacgacgacgaggaggacgaggacgacg 646 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 |||||||||||||||||| ||||| Sbjct: 609 cgacgacgaggacgacgacgagga 632
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacggggac 34 ||||||||||||| || ||||||||||||| Sbjct: 217845 gacgacgaggacgccggggaggacggggac 217816 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 aggacgacgaggaggacggggacg 35 |||||| ||||||||||||||||| Sbjct: 69984 aggacggcgaggaggacggggacg 69961
>gb|BC009438.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone IMAGE:3508344), partial cds Length = 2205 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 454 gacgacgacgaggaagacgaggagga 479
>gb|BC032443.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone IMAGE:5123212), partial cds Length = 2043 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 443 gacgacgacgaggaagacgaggagga 468
>gb|BC009372.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:16640 IMAGE:4122128), complete cds Length = 2347 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 771 gacgacgacgaggaagacgaggagga 796
>gb|AF540940.1| Human herpesvirus 2 strain G DNA polymerase gene, partial cds Length = 339 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 175 gacgacgacgaggacggggacgaggacggggacg 208 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 173 aggacgacgacgaggacggggacg 196
>gb|AF540939.1| Human herpesvirus 2 strain SN03 DNA polymerase gene, partial cds Length = 351 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 175 gacgacgacgaggacggggacgaggacggggacg 208 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 173 aggacgacgacgaggacggggacg 196
>gb|AF540938.1| Human herpesvirus 2 strain ST04 DNA polymerase gene, partial cds Length = 187 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 115 gacgacgacgaggacggggacgaggacggggacg 148 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 113 aggacgacgacgaggacggggacg 136
>ref|XM_994123.1| PREDICTED: Mus musculus hypothetical protein LOC672520 (LOC672520), mRNA Length = 243 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 106 gacgacgacgacgacgacgaggagga 131
>ref|XM_981095.1| PREDICTED: Mus musculus hypothetical protein LOC675336 (LOC675336), mRNA Length = 324 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 187 gacgacgacgacgacgacgaggagga 212
>ref|XM_982605.1| PREDICTED: Mus musculus hypothetical protein LOC666254 (LOC666254), mRNA Length = 357 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 220 gacgacgacgacgacgacgaggagga 245
>gb|AY268055.1| Lontra canadensis clone otter b8 microsatellite RIO 05 sequence Length = 428 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 306 gacgacgacgacgacgacgaggagga 331
>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence Length = 157884 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacgg 30 ||||||||||| |||||||||||||| Sbjct: 2647 gacgacgaggaggacgaggaggacgg 2672
>gb|AC118281.4| Homo sapiens BAC clone RP11-1244E8 from 4, complete sequence Length = 51095 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggaggacg 29 |||||||||||||||||| ||||||| Sbjct: 31035 cgacgacgaggacgacgacgaggacg 31010
>ref|XM_543024.2| PREDICTED: Canis familiaris similar to sorting nexin 21 isoform a (LOC485900), mRNA Length = 1338 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 gacgaggacgacgaggaggacgggga 33 ||||||||||||||||| |||||||| Sbjct: 202 gacgaggacgacgaggacgacgggga 227
>ref|XM_542944.2| PREDICTED: Canis familiaris similar to SRY-box containing gene 12 (LOC485820), mRNA Length = 1076 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||| ||||| Sbjct: 511 gacgacgacgaggacgacgacgagga 536
>ref|XM_842624.1| Leishmania major strain Friedlin DNA repair helicase (LMJ_0694) partial mRNA Length = 3321 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacggggac 34 ||||||||||||| || ||||||||||||| Sbjct: 2170 gacgacgaggacgccggggaggacggggac 2199
>ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, shaker-related subfamily, member 4 (LOC485427), mRNA Length = 2001 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| ||||||||||||||||| |||| ||||| Sbjct: 412 gacgaggacgaggacgacgaggacgacgaggacg 445
>ref|XM_849324.1| PREDICTED: Canis familiaris similar to peptidylglycine alpha-amidating monooxygenase COOH-terminal interactor (LOC485396), mRNA Length = 1785 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggagg 26 |||||||||||||||||||||| Sbjct: 502 gacgacgaggacgacgaggagg 523
>ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING finger and KH domain containing protein 1 (LOC612270), mRNA Length = 1656 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||||||||| ||||||| ||||| Sbjct: 1448 gacgaggacgaggacgacgacgaggacgaggacg 1415
>ref|XM_390687.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10511.1) partial mRNA Length = 2946 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgagga 24 |||||||||||||||||||||| Sbjct: 1688 acgacgacgaggacgacgagga 1709
>gb|AC131744.3| Mus musculus BAC clone RP23-50E10 from chromosome 3, complete sequence Length = 225416 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||||||||| || ||||||| ||||| Sbjct: 16472 gacgacgacgaggacgatgacgaggacgaggacg 16505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgag 22 ||||||||||||||||||||| Sbjct: 16562 gacgacgacgaggacgacgag 16582 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| ||||||||||| |||| Sbjct: 16553 gacgacgacgacgacgacgaggacgacg 16580 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||| ||||||| Sbjct: 16460 gacgacgacgacgacgacgacgaggacg 16487
>ref|XM_804696.1| Trypanosoma cruzi strain CL Brener nucleosome assembly protein (Tc00.1047053507963.79) partial mRNA Length = 1089 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 940 gacgacgacgacgacgacgaggagga 965
>ref|XM_548196.2| PREDICTED: Canis familiaris similar to Neurabin-2 (Neurabin-II) (Neural tissue-specific F-actin binding protein II) (Protein phosphatase 1 regulatory subunit 9B) (Spinophilin) (p130) (PP1bp134), transcript variant 1 (LOC491076), mRNA Length = 3684 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacgg 30 ||||||||||| |||||||||||||| Sbjct: 1276 gacgacgaggaggacgaggaggacgg 1301
>ref|XM_812168.1| Trypanosoma cruzi strain CL Brener nucleosome assembly protein (Tc00.1047053507031.29) partial mRNA Length = 1089 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 940 gacgacgacgaggaggacgaggagga 965
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 122734 gacgacgacgacgacgacgaggagga 122709
>ref|XM_546592.2| PREDICTED: Canis familiaris similar to Zinc finger and BTB domain containing protein 4 (KAISO-like zinc finger protein 1) (KAISO-L1) (LOC489474), mRNA Length = 4845 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgagg 23 |||||||||||||||||||||| Sbjct: 3700 gacgacgacgaggacgacgagg 3721 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| ||||||||||| |||| Sbjct: 3691 gacgacgacgacgacgacgaggacgacg 3718 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||| ||||||| Sbjct: 3688 gacgacgacgacgacgacgacgaggacg 3715
>gb|BC043619.1| Homo sapiens methyl-CpG binding domain protein 3, mRNA (cDNA clone MGC:50958 IMAGE:6156267), complete cds Length = 2360 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 789 gacgacgacgaggaagacgaggagga 814
>gb|AY038367.1| Human herpesvirus 2 strain KN 53690 DNA polymerase gene, complete cds Length = 3723 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 2023 gacgacgacgaggacggggacgaggacggggacg 2056 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 2021 aggacgacgacgaggacggggacg 2044
>gb|AY038366.1| Human herpesvirus 2 strain RR 60279 DNA polymerase gene, complete cds Length = 3723 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 2023 gacgacgacgaggacggggacgaggacggggacg 2056 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 2021 aggacgacgacgaggacggggacg 2044
>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence Length = 201487 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| ||||||||||| |||||||||| ||||| Sbjct: 152243 gacgaggacgaggacgaggaggaggacgaggacg 152210
>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds Length = 6281 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||| ||||||||||||| ||||| Sbjct: 2499 gacgaggacgaggaggacgaggaggacgaggacg 2466
>emb|BX014754.1|CNS08JJQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22AG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 890 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||| |||||||||||| ||||||| ||||| Sbjct: 818 gacgacggcgaggacgacgacgaggacgaggacg 851
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 65287 gacgacgacgaggacggggacgaggacggggacg 65320 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 65285 aggacgacgacgaggacggggacg 65308
>gb|AY142108.1| Gallus gallus tankyrase 1 mRNA, complete cds Length = 3804 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||| ||||||||||||||| Sbjct: 308 gacgacgacgtggacgacgaggagga 283
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||| ||||||||||| |||| ||||| Sbjct: 94481 gacgacgacgaagacgacgaggacgacgaggacg 94514
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||| ||||||||||| |||| ||||| Sbjct: 47249 gacgacgacgaagacgacgaggacgacgaggacg 47282
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||| ||||||||||| |||| ||||| Sbjct: 317137 gacgacgacgaagacgacgaggacgacgaggacg 317170
>gb|AC161383.5| Mus musculus BAC clone RP23-68C13 from chromosome 14, complete sequence Length = 195954 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||| ||||||||||||| ||||| Sbjct: 174603 gacgaggacgaggaggacgaggaggacgaggacg 174570
>emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BAC contig B13B3 Length = 82584 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 77710 gacgacgaggaggacgacgaggagga 77685
>emb|AJ720699.1| Gallus gallus mRNA for hypothetical protein, clone 23k10 Length = 3247 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 230 gacgacgacgacgacgacgaggagga 205
>ref|NM_204952.1| Gallus gallus forkhead box D2 (FOXD2), mRNA Length = 1708 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 295 gacgacgaagaggacgacgaggagga 320
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 137279 gacgacgacgacgacgacgaggagga 137304
>emb|CR618268.1| full-length cDNA clone CS0DL009YL06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1541 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 693 gacgacgacgaggaagacgaggagga 718
>dbj|AK021532.1| Homo sapiens cDNA FLJ11470 fis, clone HEMBA1001672, highly similar to Homo sapiens methyl-CpG binding domain-containing protein MBD3 (MBD3) mRNA Length = 2142 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 589 gacgacgacgaggaagacgaggagga 614
>dbj|AK001474.1| Homo sapiens cDNA FLJ10612 fis, clone NT2RP2005358, highly similar to Homo sapiens methyl-CpG binding domain-containing protein MBD3 mRNA Length = 2198 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 635 gacgacgacgaggaagacgaggagga 660
>ref|NM_131987.2| Drosophila melanogaster Sas10 CG4202-RA (Sas10), mRNA Length = 1644 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 226 gacgacgacgacgacgacgaggagga 251
>ref|NM_003926.5| Homo sapiens methyl-CpG binding domain protein 3 (MBD3), mRNA Length = 2559 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 827 gacgacgacgaggaagacgaggagga 852
>gb|AF231800.1|AF231800 Pinus taeda clone G18b18 microsatellite sequence Length = 485 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 119 gacgacgacgacgacgacgaggagga 144
>gb|AC169373.2| Sorghum bicolor clone SB_BBc0188M08, complete sequence Length = 137889 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagg 26 |||||||||||| ||||||||||||| Sbjct: 72122 tgacgacgacgacgacgacgaggagg 72147
>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence Length = 36144 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 acgacgaggacgacgaggagga 27 |||||||||||||||||||||| Sbjct: 27916 acgacgaggacgacgaggagga 27937
>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome Length = 139342 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 70249 gacgacgacgacgacgacgaggagga 70224 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||||||||| || ||||||| Sbjct: 91548 gacgacgacgaggacgaggacgaggacg 91575 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgagga 24 |||||||||||| ||||||||||| Sbjct: 91538 tgacgacgacgacgacgacgagga 91561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 73425 gacgacgacgaggacgacga 73406
>gb|AY047575.1| Drosophila melanogaster GH08670 full length cDNA Length = 1653 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 216 gacgacgacgacgacgacgaggagga 241
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 412448 gacgacgaggaggacgacgaggagga 412423
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 175041 gacgacgacgacgacgacgaggagga 175066
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 7075399 gacgacgacgacgacgacgaggagga 7075424 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggagga 27 ||||||||| |||||||||||||| Sbjct: 22925980 cgacgacgaagacgacgaggagga 22926003 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||| ||||||||||| Sbjct: 18919924 gacgacgacgacgacgtcgaggaggacg 18919951 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 cgacgacgaggacgacgaggagga 27 ||||||||| |||||||||||||| Sbjct: 16647657 cgacgacgatgacgacgaggagga 16647634 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacga 21 |||||||||||||||||||| Sbjct: 3017487 gacgacgacgaggacgacga 3017506
>ref|XM_392226.2| PREDICTED: Apis mellifera similar to ENSANGP00000002998 (LOC408690), mRNA Length = 807 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 757 gacgacgacgaggaggacgaggagga 782
>gb|AC126690.5| Mus musculus BAC clone RP23-189K24 from chromosome 14, complete sequence Length = 212894 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||| ||||||||||||| ||||| Sbjct: 61100 gacgaggacgaggaggacgaggaggacgaggacg 61067
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 159936 gacgacgacgaagacgacgaggagga 159961
>ref|NM_204340.1| Gallus gallus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (TNKS), mRNA Length = 3804 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||| ||||||||||||||| Sbjct: 308 gacgacgacgtggacgacgaggagga 283
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 cgaggacgacgaggaggacggg 31 |||||||||||||||||||||| Sbjct: 268610 cgaggacgacgaggaggacggg 268589 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 2207651 gacgacgacgatgacgacgaggagg 2207627 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgagga 24 |||||||||||||||||||| Sbjct: 1194019 gacgacgaggacgacgagga 1194000
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 62979 gacgacgacgacgacgacgaggagga 63004
>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown, complete sequence Length = 125050 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||||||||| ||||| Sbjct: 28816 gacgacgacgaggacgacgacgagga 28841 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| ||||||||||| |||| Sbjct: 28807 gacgacgacgacgacgacgaggacgacg 28834 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||| ||||||| Sbjct: 28804 gacgacgacgacgacgacgacgaggacg 28831
>gb|S59780.1|S59780 Zea mays heat shock protein HSP82 (hsp82) gene, complete cds Length = 3468 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggagg 26 |||||||||||||||||||||| Sbjct: 2436 gacgacgaggacgacgaggagg 2457
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 81622 gacgacgacgacgacgacgaggagga 81647
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 3 acgacgacgaggacgacgaggaggacgggg 32 |||||||||| |||||||||||||| |||| Sbjct: 119599 acgacgacgacgacgacgaggaggaggggg 119628
>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 10351 gacgacgacgaggacgaggaggagga 10326
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 109487 gacgacgacgaggacgaggaggagga 109462
>dbj|AK109392.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H08, full insert sequence Length = 1376 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 575 gacgacgatgaggacgacgaggagga 600
>emb|X15120.1|HEPVIE Pseudorabies virus immediate-early gene Length = 5123 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||| ||||||||||||| ||||| Sbjct: 1467 gacgaggacgaggaggacgaggaggacgaggacg 1434
>dbj|AK120385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I21, full insert sequence Length = 2765 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 372 gacgacgatgaggacgacgaggagga 397
>ref|XM_308581.2| Anopheles gambiae str. PEST ENSANGP00000007521 (ENSANGG00000005679), partial mRNA Length = 2721 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 95 tgcagcggcagcatcaagttcgtccaccaggactgcct 132 |||| |||||||||||||| |||||||||||||||| Sbjct: 82 tgcaccggcagcatcaagtggatccaccaggactgcct 119
>dbj|AK100652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D12, full insert sequence Length = 1679 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggaggacgggg 32 |||||||||| |||||||||||||| |||| Sbjct: 41 acgacgacgacgacgacgaggaggaggggg 12
>dbj|AK099967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127D12, full insert sequence Length = 887 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 58 gacgacgacgacgacgacgaggagga 33
>ref|NM_211577.1| Eremothecium gossypii AGL152Cp (AGL152C), mRNA Length = 1536 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 760 gacgacgaggaggacgacgaggagga 785
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cgacgacgaggacgacgaggag 25 |||||||||||||||||||||| Sbjct: 2507744 cgacgacgaggacgacgaggag 2507765
>dbj|AK064858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H13, full insert sequence Length = 2441 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 488 gacgacgatgaggacgacgaggagga 513
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 35321 gacgacgacgaggacgaggaggagga 35296 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacg 29 ||||||||||||||||| ||||||| Sbjct: 35330 gacgacgaggacgacgacgaggacg 35306 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 gaggacgacgaggaggacggggacg 35 ||||||||||||||||||| ||||| Sbjct: 26292 gaggacgacgaggaggacgaggacg 26268
>dbj|AK062694.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A07, full insert sequence Length = 727 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||||||||| |||||||| Sbjct: 586 gacgacgacgaggacgaggaggagga 611
>gb|AF072247.1|AF072247 Homo sapiens methyl-CpG binding domain-containing protein MBD3 (MBD3) mRNA, complete cds Length = 2392 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 828 gacgacgacgaggaagacgaggagga 853
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 297980 gacgacgacgacgacgacgaggagga 298005
>gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538, complete sequence Length = 42301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||||||||| ||||||||||| Sbjct: 19041 gacgacgacgaggaagacgaggagga 19016
>gb|AC102480.8| Mus musculus chromosome 3, clone RP24-423L4, complete sequence Length = 189940 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||||||||||||||| || ||||||| ||||| Sbjct: 20761 gacgacgacgaggacgatgacgaggacgaggacg 20728 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||| |||||||| ||||||| Sbjct: 20773 gacgacgacgacgacgacgacgaggacg 20746 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggaggacg 29 ||||||||||||||||| || ||||||| Sbjct: 20671 gacgacgacgaggacgaggacgaggacg 20644
>gb|U37272.1|GGU37272 Gallus gallus winged helix protein CWH-1 mRNA, complete cds Length = 1708 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagga 27 |||||||| ||||||||||||||||| Sbjct: 295 gacgacgaagaggacgacgaggagga 320
>gb|U53921.1|PCU53921 Pneumocystis carinii major surface glycoprotein (MSG) gene, partial cds Length = 2470 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 6 acgacgaggacgacgaggaggacggggacg 35 ||||||||||||||||||| |||| ||||| Sbjct: 570 acgacgaggacgacgaggacgacgaggacg 541 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||||||||||||||| |||| Sbjct: 562 gacgacgaggacgacgaggacgacg 538
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| ||||||||||| |||||||||| ||||| Sbjct: 77027 gacgaggacgaggacgaggaggaggacgaggacg 77060
>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence Length = 197951 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagga 27 ||||||||||| |||||||||||||| Sbjct: 78932 gacgacgacgacgacgacgaggagga 78907
>gb|U36196.1|CRU36196 Chlamydomonas reinhardtii novel protein kinase mRNA, complete cds Length = 1978 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 tgacgacgacgaggacgacgaggagg 26 |||||||||||||||||| ||||||| Sbjct: 1245 tgacgacgacgaggacgaggaggagg 1270
>gb|M57505.1|SH1LLT Pseudorabies virus ORF1, ORF2, and ORF3 mRNA, complete cds Length = 8438 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 ||||| |||||||| ||||||||||||| ||||| Sbjct: 5597 gacgaggacgaggaggacgaggaggacgaggacg 5630
>gb|M14793.1|HS2POLD Herpes simplex virus type 2 (strain 186) DNA polymerase gene Length = 1147 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 778 gacgacgacgaggacggggacgaggacggggacg 811 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 776 aggacgacgacgaggacggggacg 799
>gb|M16321.1|HS2POL HSV-2 DNA polymerase gene, complete cds Length = 4003 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggaggacggggacg 35 |||||||||||||||| || ||||||||||||| Sbjct: 2257 gacgacgacgaggacggggacgaggacggggacg 2290 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 aggacgacgaggaggacggggacg 35 |||||||||| ||||||||||||| Sbjct: 2255 aggacgacgacgaggacggggacg 2278
>ref|XM_525340.1| PREDICTED: Pan troglodytes LOC469956 (LOC469956), mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||| ||||||||||||||||||| Sbjct: 769 gacgaggacgaggacgacgaggagg 793
>ref|XM_474370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1197 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggagga 27 |||||||||| |||||||||||||| Sbjct: 880 acgacgacgatgacgacgaggagga 856
>ref|XM_450906.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 221 gacgacgacgacgacgacgaggagg 197
>ref|NM_197598.1| Oryza sativa (japonica cultivar-group) putative chitinase (OSJNBb0015I11.16), mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 6 gacgacgacgacgacgacgaggagg 30
>ref|NM_197409.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0028C01.41), mRNA Length = 600 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 acgacgacgaggacgacgaggagga 27 ||||||||||||| ||||||||||| Sbjct: 312 acgacgacgaggaggacgaggagga 288
>gb|AC116498.15| Mus musculus chromosome 15, clone RP24-294J7, complete sequence Length = 183865 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 ||||| ||||||||||||||||||| Sbjct: 110977 gacgaggaggacgacgaggaggacg 111001
>ref|NM_006168.1| Homo sapiens NK6 transcription factor related, locus 1 (Drosophila) (NKX6-1), mRNA Length = 1116 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||||||||| ||||||| Sbjct: 173 gacgacgacgaggacgaggaggagg 149
>ref|NM_152897.1| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 2, mRNA Length = 1921 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||| ||||||||||||||||||| Sbjct: 303 gacgaggacgaggacgacgaggagg 327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgagga 24 |||||||||||||||||||| Sbjct: 291 gacgacgaggacgacgagga 310
>ref|NM_033421.2| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 1, mRNA Length = 3173 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||| ||||||||||||||||||| Sbjct: 303 gacgaggacgaggacgacgaggagg 327 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgagga 24 |||||||||||||||||||| Sbjct: 291 gacgacgaggacgacgagga 310
>gb|BT021302.1| Drosophila melanogaster RE22038 full insert cDNA Length = 3374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gacgacgaggacgacgaggaggacg 29 |||||||| |||||||||||||||| Sbjct: 1403 gacgacgacgacgacgaggaggacg 1427
>gb|AY290402.1| Zea mays cultivar WF9 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290401.1| Zea mays cultivar W64A isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290400.1| Zea mays cultivar W182B isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290399.1| Zea mays cultivar W153R isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290398.1| Zea mays cultivar VA26 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290397.1| Zea mays cultivar U267Y isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290395.1| Zea mays cultivar Tzi18 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290394.1| Zea mays cultivar Tzi10 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290392.1| Zea mays cultivar T8 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290388.1| Zea mays cultivar SC213 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290386.1| Zea mays cultivar Q6199 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290385.1| Zea mays cultivar PA91 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290384.1| Zea mays cultivar P39 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290383.1| Zea mays cultivar OH7B isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290382.1| Zea mays cultivar OH43 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290381.1| Zea mays cultivar ND246 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290380.1| Zea mays cultivar NC354 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290379.1| Zea mays cultivar NC352 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290378.1| Zea mays cultivar NC350 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290377.1| Zea mays cultivar NC348 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290376.1| Zea mays cultivar NC338 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290375.1| Zea mays cultivar NC320 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290373.1| Zea mays cultivar NC300 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290372.1| Zea mays cultivar NC298 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290370.1| Zea mays cultivar NC260 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290369.1| Zea mays cultivar NC258 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290368.1| Zea mays cultivar NC250 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290367.1| Zea mays cultivar N28HT isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290366.1| Zea mays cultivar N192 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290364.1| Zea mays cultivar Mo17 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290363.1| Zea mays cultivar M37W isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290362.1| Zea mays cultivar M162W isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290361.1| Zea mays cultivar Ky21 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290359.1| Zea mays cultivar KI43 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290358.1| Zea mays cultivar KI3 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290357.1| Zea mays cultivar Ki21 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290356.1| Zea mays cultivar KI11 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290355.1| Zea mays cultivar K55 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290349.1| Zea mays cultivar I29 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396
>gb|AY290346.1| Zea mays cultivar H99 isoamylase (su1) gene, exon 1 and partial cds Length = 474 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 360 gacgacgacgacgacgacgaggagg 384
>gb|AY290345.1| Zea mays cultivar H95 isoamylase (su1) gene, exon 1 and partial cds Length = 486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gacgacgacgaggacgacgaggagg 26 ||||||||||| ||||||||||||| Sbjct: 372 gacgacgacgacgacgacgaggagg 396 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,695,299 Number of Sequences: 3902068 Number of extensions: 3695299 Number of successful extensions: 112030 Number of sequences better than 10.0: 700 Number of HSP's better than 10.0 without gapping: 742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103456 Number of HSP's gapped (non-prelim): 8017 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)