>ARGC_THETN (Q8R7B8) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 344

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = +3

Query: 339 YGGDY------KTASALVECYEDSVTQLHIMGDPGARP 434
           YGG+Y      K A  L E Y DS+ +  ++G+PG  P
Sbjct: 114 YGGEYDGYDGIKRAYGLPEIYRDSIKEADVVGNPGCYP 151

>NIFK_ANASP (P00468) Nitrogenase molybdenum-iron protein beta chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 512

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 25  NFASAPTPEPESRNNSWLRELLIQDKESERQEISIRPKKSCK 150
           NF  A  PE   R + W +    ++K   R+ +++ P K C+
Sbjct: 30  NFEGAHPPEEVERVSEWTKSWDYREKNFAREALTVNPAKGCQ 71

>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
          Length = 342

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +3

Query: 249 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFCYGGDYKTASALVECYEDS----VTQLHIMG 416
           P    +L ++++ LG+P  L +WL  TD C           V C  D+    V  L + G
Sbjct: 34  PQDKQALLQIKKDLGNPTTLSSWLPTTDCC-----NRTWLGVLCDTDTQTYRVNNLDLSG 88

Query: 417 DPGARPLPTPS 449
               +P P PS
Sbjct: 89  HNLPKPYPIPS 99

>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 342

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +3

Query: 249 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFCYGGDYKTASALVECYEDS----VTQLHIMG 416
           P    +L ++++ LG+P  L +WL  TD C           V C  D+    V  L + G
Sbjct: 34  PQDKQALLQIKKDLGNPTTLSSWLPTTDCC-----NRTWLGVLCDTDTQTYRVNNLDLSG 88

Query: 417 DPGARPLPTPS 449
               +P P PS
Sbjct: 89  HNLPKPYPIPS 99

>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +3

Query: 249 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFCYGGDYKTASALVECYEDS----VTQLHIMG 416
           P    +L ++++ LG+P  L +WL  TD C           V C  D+    V  L + G
Sbjct: 34  PQDKQALLQIKKDLGNPTTLSSWLPTTDCC-----NRTWLGVLCDTDTQTYRVNNLDLSG 88

Query: 417 DPGARPLPTPS 449
               +P P PS
Sbjct: 89  LNLPKPYPIPS 99

>VP5_BRD (P21230) Outer capsid protein VP5|
          Length = 480

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 345 GDYKTASALVECYEDSVTQLHIMGDPGAR-PLPTPSH 452
           G Y +  A V C + ++ Q H   D G++ P+P P H
Sbjct: 389 GPYHSGQAFVFCLDLALDQFHFEEDTGSKPPVPPPRH 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,840,328
Number of Sequences: 219361
Number of extensions: 860934
Number of successful extensions: 3049
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)