Clone Name | bastl38d09 |
---|---|
Clone Library Name | barley_pub |
>RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb)| Length = 988 Score = 46.2 bits (108), Expect = 4e-05 Identities = 29/109 (26%), Positives = 53/109 (48%) Frame = +1 Query: 25 AQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGGPSCPTWL 204 A+A L K L+ L++ WD+ + S E VLE+L+PH +L+ L I GG P+W+ Sbjct: 664 AEANLSAKANLQSLSMSWDNDGPNRYESKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWI 723 Query: 205 GDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEE 351 + + + P G+ L ++L++ + E++ E+ Sbjct: 724 NHSVLEKVISVRIKSCKNCLCLPPFGELPCLENLELQNGSAEVEYVEED 772
>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight| resistance protein RPI) Length = 970 Score = 45.8 bits (107), Expect = 5e-05 Identities = 29/115 (25%), Positives = 51/115 (44%) Frame = +1 Query: 4 INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183 + +++A +A L K L L++ W++ + S E VLE+L+PH +L L I G G Sbjct: 658 VKNDKDAKEANLSAKGNLHSLSMSWNNFGPHIYESEEVKVLEALKPHSNLTSLKIYGFRG 717 Query: 184 PSCPTWLGDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIE 348 P W+ + L + + P G L ++L + E++ E Sbjct: 718 IHLPEWMNHSVLKNIVSILISNFRNCSCLPPFGDLPCLESLELHWGSADVEYVEE 772
>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb) (Blight| resistance protein B149) Length = 947 Score = 44.7 bits (104), Expect = 1e-04 Identities = 32/118 (27%), Positives = 53/118 (44%) Frame = +1 Query: 4 INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183 + + EA +A L K L L++ WD R + S E VLE+L+PH +L+ L I G Sbjct: 666 VKNDMEAKEANLSAKANLHSLSMSWD--RPNRYESEEVKVLEALKPHPNLKYLEIIDFCG 723 Query: 184 PSCPTWLGDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECF 357 P W+ + L + P G+ L ++L+D + E++ + F Sbjct: 724 FCLPDWMNHSVLKNVVSILISGCENCSCLPPFGELPCLESLELQDGSVEVEYVEDSGF 781
>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460| Length = 1424 Score = 43.5 bits (101), Expect = 2e-04 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Frame = +1 Query: 19 EAAQAKLIEKNYLRRLTLDWDSKRSSVEPSV-------EAAVLESLQPHGDLQVLCIRGH 177 EA A L K +L L L W K S P + VL L+PH L+ CI + Sbjct: 710 EAKDAGLKRKPFLDGLILKWTVKGSGFVPGSFNALACDQKEVLRMLEPHPHLKTFCIESY 769 Query: 178 GGPSCPTWLGD 210 G + P WLGD Sbjct: 770 QGGAFPKWLGD 780
>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1| Length = 1054 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%) Frame = +1 Query: 19 EAAQAKLIEKNYLRRLTLDWDSKRSSVEPSV-------EAAVLESLQPHGDLQVLCIRGH 177 +AA+A L K +LR + W + SS E + EA V E L+PH ++ L I + Sbjct: 716 DAAEANLNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERY 775 Query: 178 GGPSCPTWLGD 210 G P WL D Sbjct: 776 KGRRFPDWLSD 786
>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)| Length = 1025 Score = 42.4 bits (98), Expect = 5e-04 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Frame = +1 Query: 4 INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183 + + +A +A L K L L L WD ++ VLE+L+PH +L+ L I G GG Sbjct: 703 VKKDTDAKEANLSAKANLHSLCLSWDLDGKH---RYDSEVLEALKPHSNLKYLEINGFGG 759 Query: 184 PSCPTWLGDEFAVEALQSLYLDGV-SWEVFPSLGKAWDLHEVKLEDIARPKEFI 342 P W+ ++ ++ + S+ + G + P G+ L ++L + E++ Sbjct: 760 IRLPDWM-NQSVLKNVVSIRIRGCENCSCLPPFGELPCLESLELHTGSADVEYV 812
>DOCK2_HUMAN (Q92608) Dedicator of cytokinesis protein 2| Length = 1830 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 247 DGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECFCRL 366 D ++W++ P LG +HE ++ D RP +EECF L Sbjct: 1571 DLIAWQI-PFLGAGIKIHEKRVSDNLRPFHDRMEECFKNL 1609
>DOCK2_MOUSE (Q8C3J5) Dedicator of cytokinesis protein 2 (Hch protein)| Length = 1828 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 247 DGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECFCRL 366 D ++W++ P LG +HE ++ D RP +EECF L Sbjct: 1570 DLIAWQI-PFLGAGIKIHEKRVSDNLRPFHDRMEECFKNL 1608
>CEK1_SCHPO (P38938) Serine/threonine-protein kinase cek1 (EC 2.7.11.1)| Length = 1338 Score = 29.3 bits (64), Expect = 4.4 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Frame = -1 Query: 353 HSSMIN---SFGLAISSNFTSWRSQAFPKEGKTSQETPSR*RDCRASTANSSPSHVGQEG 183 H S+ N + G +S + +++ S ++ S + R D + + NSSP V +G Sbjct: 478 HVSLSNPDFAIGSPMSQDSSNYSSPLHRRKASDSNFSDPRFDDLKYLSPNSSPRFVASDG 537 Query: 182 PPCPLMHNT*RSPCG*RLSRTAASTLGSTLDRLLSQS 72 P P + RS SR AS LG RL S S Sbjct: 538 PNRPASNG--RSSL---FSRGRASNLGDVGLRLPSPS 569
>TLR6_MOUSE (Q9EPW9) Toll-like receptor 6 precursor| Length = 795 Score = 28.9 bits (63), Expect = 5.8 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 Query: 339 YHRGMLLQANTTYTHWPWKFGKMGL 413 YH+ L A TY WP + GK GL Sbjct: 748 YHKLRALMAQRTYLEWPTEKGKRGL 772
>MUS81_NEUCR (Q7SD49) Crossover junction endonuclease mus-81 (EC 3.1.22.-)| Length = 645 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = -1 Query: 344 MINSFGLAISSNFTSWRSQAFPKEGKTSQETPSR*RDCRASTANSSPSHVGQEGPPCPLM 165 ++N FG IS T Q + G + P R R +A ++ V E PP P Sbjct: 55 VLNGFGPTISQRLTDRLKQYCEENGLPMPKHPKRKRTLELESALAAAGAVQDEQPPPPKR 114 Query: 164 HNT*R 150 T R Sbjct: 115 ARTAR 119
>MURE_PSEAE (Q59650) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 487 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 103 PSVEAAVLESLQPHGDLQVLCIRGHGG 183 P VLE+L+PH ++LC+ G GG Sbjct: 350 PDALEKVLEALRPHAAARLLCLFGCGG 376
>HG2A_MOUSE (P04441) H-2 class II histocompatibility antigen gamma chain (MHC| class II-associated invariant chain) (Ia antigen-associated invariant chain) (Ii) (CD74 antigen) Length = 279 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 244 LDGVSWEVFPSLGKAWDLHEVKLEDIARPK 333 +DGV+W++F S K W L E+ + K Sbjct: 155 MDGVNWKIFESWMKQWLLFEMSKNSLEEKK 184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.135 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,023,263 Number of Sequences: 219361 Number of extensions: 1263252 Number of successful extensions: 3774 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3774 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)