>RGA4_SOLBU (Q7XA39) Putative disease resistance protein RGA4 (RGA4-blb)|
          Length = 988

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 29/109 (26%), Positives = 53/109 (48%)
 Frame = +1

Query: 25  AQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGGPSCPTWL 204
           A+A L  K  L+ L++ WD+   +   S E  VLE+L+PH +L+ L I   GG   P+W+
Sbjct: 664 AEANLSAKANLQSLSMSWDNDGPNRYESKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWI 723

Query: 205 GDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEE 351
                 + +        +    P  G+   L  ++L++ +   E++ E+
Sbjct: 724 NHSVLEKVISVRIKSCKNCLCLPPFGELPCLENLELQNGSAEVEYVEED 772

>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight|
            resistance protein RPI)
          Length = 970

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 29/115 (25%), Positives = 51/115 (44%)
 Frame = +1

Query: 4    INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183
            +  +++A +A L  K  L  L++ W++    +  S E  VLE+L+PH +L  L I G  G
Sbjct: 658  VKNDKDAKEANLSAKGNLHSLSMSWNNFGPHIYESEEVKVLEALKPHSNLTSLKIYGFRG 717

Query: 184  PSCPTWLGDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIE 348
               P W+        +  L  +  +    P  G    L  ++L   +   E++ E
Sbjct: 718  IHLPEWMNHSVLKNIVSILISNFRNCSCLPPFGDLPCLESLELHWGSADVEYVEE 772

>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb) (Blight|
            resistance protein B149)
          Length = 947

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 32/118 (27%), Positives = 53/118 (44%)
 Frame = +1

Query: 4    INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183
            +  + EA +A L  K  L  L++ WD  R +   S E  VLE+L+PH +L+ L I    G
Sbjct: 666  VKNDMEAKEANLSAKANLHSLSMSWD--RPNRYESEEVKVLEALKPHPNLKYLEIIDFCG 723

Query: 184  PSCPTWLGDEFAVEALQSLYLDGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECF 357
               P W+        +  L     +    P  G+   L  ++L+D +   E++ +  F
Sbjct: 724  FCLPDWMNHSVLKNVVSILISGCENCSCLPPFGELPCLESLELQDGSVEVEYVEDSGF 781

>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460|
          Length = 1424

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
 Frame = +1

Query: 19  EAAQAKLIEKNYLRRLTLDWDSKRSSVEPSV-------EAAVLESLQPHGDLQVLCIRGH 177
           EA  A L  K +L  L L W  K S   P         +  VL  L+PH  L+  CI  +
Sbjct: 710 EAKDAGLKRKPFLDGLILKWTVKGSGFVPGSFNALACDQKEVLRMLEPHPHLKTFCIESY 769

Query: 178 GGPSCPTWLGD 210
            G + P WLGD
Sbjct: 770 QGGAFPKWLGD 780

>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1|
          Length = 1054

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
 Frame = +1

Query: 19  EAAQAKLIEKNYLRRLTLDWDSKRSSVEPSV-------EAAVLESLQPHGDLQVLCIRGH 177
           +AA+A L  K +LR +   W +  SS E +        EA V E L+PH  ++ L I  +
Sbjct: 716 DAAEANLNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERY 775

Query: 178 GGPSCPTWLGD 210
            G   P WL D
Sbjct: 776 KGRRFPDWLSD 786

>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)|
          Length = 1025

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
 Frame = +1

Query: 4    INTEEEAAQAKLIEKNYLRRLTLDWDSKRSSVEPSVEAAVLESLQPHGDLQVLCIRGHGG 183
            +  + +A +A L  K  L  L L WD          ++ VLE+L+PH +L+ L I G GG
Sbjct: 703  VKKDTDAKEANLSAKANLHSLCLSWDLDGKH---RYDSEVLEALKPHSNLKYLEINGFGG 759

Query: 184  PSCPTWLGDEFAVEALQSLYLDGV-SWEVFPSLGKAWDLHEVKLEDIARPKEFI 342
               P W+ ++  ++ + S+ + G  +    P  G+   L  ++L   +   E++
Sbjct: 760  IRLPDWM-NQSVLKNVVSIRIRGCENCSCLPPFGELPCLESLELHTGSADVEYV 812

>DOCK2_HUMAN (Q92608) Dedicator of cytokinesis protein 2|
          Length = 1830

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 247  DGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECFCRL 366
            D ++W++ P LG    +HE ++ D  RP    +EECF  L
Sbjct: 1571 DLIAWQI-PFLGAGIKIHEKRVSDNLRPFHDRMEECFKNL 1609

>DOCK2_MOUSE (Q8C3J5) Dedicator of cytokinesis protein 2 (Hch protein)|
          Length = 1828

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 247  DGVSWEVFPSLGKAWDLHEVKLEDIARPKEFIIEECFCRL 366
            D ++W++ P LG    +HE ++ D  RP    +EECF  L
Sbjct: 1570 DLIAWQI-PFLGAGIKIHEKRVSDNLRPFHDRMEECFKNL 1608

>CEK1_SCHPO (P38938) Serine/threonine-protein kinase cek1 (EC 2.7.11.1)|
          Length = 1338

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = -1

Query: 353 HSSMIN---SFGLAISSNFTSWRSQAFPKEGKTSQETPSR*RDCRASTANSSPSHVGQEG 183
           H S+ N   + G  +S + +++ S    ++   S  +  R  D +  + NSSP  V  +G
Sbjct: 478 HVSLSNPDFAIGSPMSQDSSNYSSPLHRRKASDSNFSDPRFDDLKYLSPNSSPRFVASDG 537

Query: 182 PPCPLMHNT*RSPCG*RLSRTAASTLGSTLDRLLSQS 72
           P  P  +   RS      SR  AS LG    RL S S
Sbjct: 538 PNRPASNG--RSSL---FSRGRASNLGDVGLRLPSPS 569

>TLR6_MOUSE (Q9EPW9) Toll-like receptor 6 precursor|
          Length = 795

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 339 YHRGMLLQANTTYTHWPWKFGKMGL 413
           YH+   L A  TY  WP + GK GL
Sbjct: 748 YHKLRALMAQRTYLEWPTEKGKRGL 772

>MUS81_NEUCR (Q7SD49) Crossover junction endonuclease mus-81 (EC 3.1.22.-)|
          Length = 645

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = -1

Query: 344 MINSFGLAISSNFTSWRSQAFPKEGKTSQETPSR*RDCRASTANSSPSHVGQEGPPCPLM 165
           ++N FG  IS   T    Q   + G    + P R R     +A ++   V  E PP P  
Sbjct: 55  VLNGFGPTISQRLTDRLKQYCEENGLPMPKHPKRKRTLELESALAAAGAVQDEQPPPPKR 114

Query: 164 HNT*R 150
             T R
Sbjct: 115 ARTAR 119

>MURE_PSEAE (Q59650) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 487

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 103 PSVEAAVLESLQPHGDLQVLCIRGHGG 183
           P     VLE+L+PH   ++LC+ G GG
Sbjct: 350 PDALEKVLEALRPHAAARLLCLFGCGG 376

>HG2A_MOUSE (P04441) H-2 class II histocompatibility antigen gamma chain (MHC|
           class II-associated invariant chain) (Ia
           antigen-associated invariant chain) (Ii) (CD74 antigen)
          Length = 279

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 244 LDGVSWEVFPSLGKAWDLHEVKLEDIARPK 333
           +DGV+W++F S  K W L E+    +   K
Sbjct: 155 MDGVNWKIFESWMKQWLLFEMSKNSLEEKK 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,023,263
Number of Sequences: 219361
Number of extensions: 1263252
Number of successful extensions: 3774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3774
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)