ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LR... 46 0.095
2gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 o... 44 0.38
3gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 44 0.38
4gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 44 0.38
5dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 44 0.38
6gb|AY423023.1| Danio rerio KIAA1376-like protein mRNA, complete cds 42 1.5
7gb|BC064165.1| Xenopus tropicalis zinc finger protein 207, mRNA ... 42 1.5
8gb|BC003715.1| Mus musculus zinc finger protein 207, mRNA (cDNA ... 42 1.5
9emb|AL109653.14|HSBG115M3 Human DNA sequence from clone GS1-115M... 42 1.5
10ref|NM_204045.1| Xenopus tropicalis zinc finger protein 207 (znf... 42 1.5
11emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chr... 42 1.5
12emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in ... 42 1.5
13dbj|AK140139.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.5
14dbj|AK146787.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 42 1.5
15dbj|AK159683.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 42 1.5
16dbj|AK087885.1| Mus musculus 2 days pregnant adult female ovary ... 42 1.5
17dbj|AK033497.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 1.5
18emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR diseas... 42 1.5
19emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LR... 42 1.5
20emb|BX649423.7| Zebrafish DNA sequence from clone DKEY-18O7 in l... 42 1.5
21emb|CR762039.2| Xenopus tropicalis finished cDNA, clone TEgg040a13 42 1.5
22ref|NM_011751.1| Mus musculus zinc finger protein 207 (Zfp207), ... 42 1.5
23gb|BC068345.1| Danio rerio arrestin domain containing 2, mRNA (c... 42 1.5
24dbj|AB013357.1| Mus musculus mRNA for 49 kDa zinc finger protein... 42 1.5
25dbj|AB032196.1| Mus musculus mRNA for zinc finger transcription ... 42 1.5
26ref|NM_199939.1| Danio rerio arrestin domain containing 2 (arrdc... 42 1.5
27gb|AC115015.8| Mus musculus chromosome 3, clone RP24-196A21, com... 40 5.9
28gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.9
29ref|XM_535169.2| PREDICTED: Canis familiaris similar to amyloid ... 40 5.9
30ref|XM_964539.1| PREDICTED: Tribolium castaneum similar to CG302... 40 5.9
31emb|Z73546.1|SCYPL190C S.cerevisiae chromosome XVI reading frame... 40 5.9
32emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, com... 40 5.9
33gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, comple... 40 5.9
34gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, com... 40 5.9
35gb|AC022334.66| Homo sapiens 12 BAC RP11-365O10 (Roswell Park Ca... 40 5.9
36gb|AC007250.2| Homo sapiens BAC clone RP11-334G22 from 2, comple... 40 5.9
37emb|Z82398.1|RPZ82398 R.prowazekii genomic DNA fragment (clone A3R) 40 5.9
38gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, com... 40 5.9
39gb|DQ332239.1| Synthetic construct Saccharomyces cerevisiae clon... 40 5.9
40emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chr... 40 5.9
41gb|U05314.1|SCU05314 Saccharomyces cerevisiae nuclear polyadenyl... 40 5.9
42emb|AL845467.3| Mouse DNA sequence from clone RP23-435G20 on chr... 40 5.9
43dbj|D37935.1|YSCRNABP Yeast DNA for RNA binding protein, complet... 40 5.9 
>emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein
            homologue (rga S-112 gene)
          Length = 4654

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 164  gcattagagggcatggaggtccttcttgtccgacatggctggg 206
            |||||||||||||||||||| ||  ||| ||| ||||||||||
Sbjct: 2644 gcattagagggcatggaggtgctaattgcccgtcatggctggg 2686
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>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 11     cagaagaagaagcagctcaagcaaaa 36
              |||||||||||||||||||| |||||
Sbjct: 105435 cagaagaagaagcagctcaatcaaaa 105410
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>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 11      cagaagaagaagcagctcaagcaaaa 36
               |||||||||||||||||||| |||||
Sbjct: 1062141 cagaagaagaagcagctcaatcaaaa 1062166
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 11      cagaagaagaagcagctcaagcaaaa 36
               |||||||||||||||||||| |||||
Sbjct: 1009301 cagaagaagaagcagctcaatcaaaa 1009276
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 11      cagaagaagaagcagctcaagcaaaa 36
               |||||||||||||||||||| |||||
Sbjct: 1008622 cagaagaagaagcagctcaatcaaaa 1008597
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>gb|AY423023.1| Danio rerio KIAA1376-like protein mRNA, complete cds
          Length = 2687

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    cacagaagaagaagcagctca 29
            |||||||||||||||||||||
Sbjct: 1293 cacagaagaagaagcagctca 1313
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>gb|BC064165.1| Xenopus tropicalis zinc finger protein 207, mRNA (cDNA clone
          MGC:75627 IMAGE:5379396), complete cds
          Length = 1955

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 agaagaagaagcagctcaagc 32
          |||||||||||||||||||||
Sbjct: 48 agaagaagaagcagctcaagc 68
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>gb|BC003715.1| Mus musculus zinc finger protein 207, mRNA (cDNA clone MGC:5714
           IMAGE:3601357), complete cds
          Length = 2134

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 128 agaagaagaagcagctcaagc 148
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>emb|AL109653.14|HSBG115M3 Human DNA sequence from clone GS1-115M3 on chromosome Xq27.1-28
             Contains gene KIAA1854 (containing FLJ38959) and a CpG
             island, complete sequence
          Length = 161341

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    caaaactgatagagaaaaact 52
             |||||||||||||||||||||
Sbjct: 87479 caaaactgatagagaaaaact 87499
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>ref|NM_204045.1| Xenopus tropicalis zinc finger protein 207 (znf207), mRNA
          Length = 1955

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 agaagaagaagcagctcaagc 32
          |||||||||||||||||||||
Sbjct: 48 agaagaagaagcagctcaagc 68
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>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the
             3' end of the Myo1d gene for myosin ID, two novel genes,
             the Cdk5r gene for cyclin-dependent kinase 5 regulatory
             subunit (p35), the Psmd11 gene for non-ATPase proteasome
             (prosome, macropain) 26S subunit 11, the Zfp207 gene for
             zinc finger protein 207 and the 3' end of the Rhbdl4 gene
             for rhomboid veinlet-like 4 (Drosophila), complete
             sequence
          Length = 195208

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    agaagaagaagcagctcaagc 32
             |||||||||||||||||||||
Sbjct: 50972 agaagaagaagcagctcaagc 50992
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>emb|BX530062.10| Zebrafish DNA sequence from clone DKEY-13M1 in linkage group 11, complete
              sequence
          Length = 144678

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      cacagaagaagaagcagctca 29
              |||||||||||||||||||||
Sbjct: 131960 cacagaagaagaagcagctca 131980
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>dbj|AK140139.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230312D24
           product:Zinc finger transcription factor ZNF207 homolog
           [Mus musculus], full insert sequence
          Length = 2298

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 170 agaagaagaagcagctcaagc 190
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>dbj|AK146787.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920055M07 product:zinc finger protein
           207, full insert sequence
          Length = 2319

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 150 agaagaagaagcagctcaagc 170
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>dbj|AK159683.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420028C23 product:zinc finger protein
           207, full insert sequence
          Length = 2117

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 138 agaagaagaagcagctcaagc 158
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>dbj|AK087885.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330036J15
           product:zinc finger protein 207, full insert sequence
          Length = 2898

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 187 agaagaagaagcagctcaagc 207
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>dbj|AK033497.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030404K10 product:zinc finger protein
           207, full insert sequence
          Length = 2152

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 136 agaagaagaagcagctcaagc 156
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>emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue
            (rga S-9217 gene)
          Length = 5145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  tgcattagagggcatggaggt 183
            |||||||||||||||||||||
Sbjct: 2820 tgcattagagggcatggaggt 2840
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>emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein
            homologue (rga S-226 gene)
          Length = 5451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  tgcattagagggcatggaggt 183
            |||||||||||||||||||||
Sbjct: 3047 tgcattagagggcatggaggt 3067
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>emb|BX649423.7| Zebrafish DNA sequence from clone DKEY-18O7 in linkage group 4,
             complete sequence
          Length = 182374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   tctctttatctggatggtgtt 255
             |||||||||||||||||||||
Sbjct: 20601 tctctttatctggatggtgtt 20581
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>emb|CR762039.2| Xenopus tropicalis finished cDNA, clone TEgg040a13
          Length = 1932

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 agaagaagaagcagctcaagc 32
          |||||||||||||||||||||
Sbjct: 34 agaagaagaagcagctcaagc 54
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>ref|NM_011751.1| Mus musculus zinc finger protein 207 (Zfp207), mRNA
          Length = 2082

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 121 agaagaagaagcagctcaagc 141
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>gb|BC068345.1| Danio rerio arrestin domain containing 2, mRNA (cDNA clone MGC:85652
            IMAGE:6805919), complete cds
          Length = 2522

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    cacagaagaagaagcagctca 29
            |||||||||||||||||||||
Sbjct: 1139 cacagaagaagaagcagctca 1159
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>dbj|AB013357.1| Mus musculus mRNA for 49 kDa zinc finger protein, complete cds
          Length = 2082

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  agaagaagaagcagctcaagc 32
           |||||||||||||||||||||
Sbjct: 121 agaagaagaagcagctcaagc 141
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>dbj|AB032196.1| Mus musculus mRNA for zinc finger transcription factor ZNF207,
          complete cds
          Length = 1561

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 agaagaagaagcagctcaagc 32
          |||||||||||||||||||||
Sbjct: 68 agaagaagaagcagctcaagc 88
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>ref|NM_199939.1| Danio rerio arrestin domain containing 2 (arrdc2), mRNA
          Length = 2687

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    cacagaagaagaagcagctca 29
            |||||||||||||||||||||
Sbjct: 1293 cacagaagaagaagcagctca 1313
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>gb|AC115015.8| Mus musculus chromosome 3, clone RP24-196A21, complete sequence
          Length = 137911

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aaacacagaagaagaagcag 25
              ||||||||||||||||||||
Sbjct: 118203 aaacacagaagaagaagcag 118222
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     ctttatctggatggtgtttc 257
               ||||||||||||||||||||
Sbjct: 1998263 ctttatctggatggtgtttc 1998244
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>ref|XM_535169.2| PREDICTED: Canis familiaris similar to amyloid beta (A4) precursor
            protein-binding, family B, member 1 interacting protein
            (LOC477985), mRNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   gaagaagaagcagctcaagc 32
            ||||||||||||||||||||
Sbjct: 1213 gaagaagaagcagctcaagc 1232
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>ref|XM_964539.1| PREDICTED: Tribolium castaneum similar to CG30259-PA (LOC658129),
           mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  agaagaagaagcagctcaag 31
           ||||||||||||||||||||
Sbjct: 92  agaagaagaagcagctcaag 111
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>emb|Z73546.1|SCYPL190C S.cerevisiae chromosome XVI reading frame ORF YPL190c
          Length = 4474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    aataaacacagaagaagaag 22
            ||||||||||||||||||||
Sbjct: 2798 aataaacacagaagaagaag 2779
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>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4
          Length = 282610

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ataaacacagaagaagaagc 23
             ||||||||||||||||||||
Sbjct: 90207 ataaacacagaagaagaagc 90188
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>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ttgggaagttttcccttctt 277
             ||||||||||||||||||||
Sbjct: 86975 ttgggaagttttcccttctt 86994
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>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence
          Length = 202043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   cttcagccacatggagatct 152
             ||||||||||||||||||||
Sbjct: 55181 cttcagccacatggagatct 55162
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>gb|AC022334.66| Homo sapiens 12 BAC RP11-365O10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 122025

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   tctttagggaaggcttggga 293
             ||||||||||||||||||||
Sbjct: 74088 tctttagggaaggcttggga 74107
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>gb|AC007250.2| Homo sapiens BAC clone RP11-334G22 from 2, complete sequence
          Length = 180557

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ggatggtgtttcttgggaag 265
             ||||||||||||||||||||
Sbjct: 88940 ggatggtgtttcttgggaag 88959
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>emb|Z82398.1|RPZ82398 R.prowazekii genomic DNA fragment (clone A3R)
          Length = 974

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 4   ataaacacagaagaagaagc 23
           ||||||||||||||||||||
Sbjct: 423 ataaacacagaagaagaagc 404
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>gb|AC113315.8| Mus musculus chromosome 3, clone RP23-441B22, complete sequence
          Length = 187126

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    aaacacagaagaagaagcag 25
            ||||||||||||||||||||
Sbjct: 3240 aaacacagaagaagaagcag 3259
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>gb|DQ332239.1| Synthetic construct Saccharomyces cerevisiae clone FLH202516.01X
           NAB3 gene, complete sequence
          Length = 2409

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   aataaacacagaagaagaag 22
           ||||||||||||||||||||
Sbjct: 249 aataaacacagaagaagaag 268
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>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 197   catggctgggtgatgagtttgctg 220
             ||||||||| ||||||||||||||
Sbjct: 41634 catggctggctgatgagtttgctg 41657
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>gb|U05314.1|SCU05314 Saccharomyces cerevisiae nuclear polyadenylated RNA-binding protein
           Nab3p (NAB3) gene, complete cds
          Length = 2499

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   aataaacacagaagaagaag 22
           ||||||||||||||||||||
Sbjct: 290 aataaacacagaagaagaag 309
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>emb|AL845467.3| Mouse DNA sequence from clone RP23-435G20 on chromosome 2, complete
             sequence
          Length = 201400

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    aaactgatagagaaaaacta 53
             ||||||||||||||||||||
Sbjct: 34220 aaactgatagagaaaaacta 34201
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>dbj|D37935.1|YSCRNABP Yeast DNA for RNA binding protein, complete cds
          Length = 2643

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   aataaacacagaagaagaag 22
           ||||||||||||||||||||
Sbjct: 417 aataaacacagaagaagaag 436


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,041,558
Number of Sequences: 3902068
Number of extensions: 5041558
Number of successful extensions: 92811
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92700
Number of HSP's gapped (non-prelim): 111
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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