>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0012G21, complete sequence
          Length = 135750

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   ctcgcggcggcggaggacacc 258
             |||||||||||||||||||||
Sbjct: 71730 ctcgcggcggcggaggacacc 71710

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 238      ctcgcggcggcggaggacacc 258
                |||||||||||||||||||||
Sbjct: 21819321 ctcgcggcggcggaggacacc 21819301

>dbj|AK072154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M13, full
            insert sequence
          Length = 2100

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 238  ctcgcggcggcggaggacacc 258
            |||||||||||||||||||||
Sbjct: 1428 ctcgcggcggcggaggacacc 1448

>dbj|AK071331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089C14, full
            insert sequence
          Length = 1594

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 238  ctcgcggcggcggaggacacc 258
            |||||||||||||||||||||
Sbjct: 1410 ctcgcggcggcggaggacacc 1430

>ref|XM_466454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 agcgcgctcgcggcggcgga 251
           ||||||||||||||||||||
Sbjct: 460 agcgcgctcgcggcggcgga 479

>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gtccaacccctcccctcccc 179
              ||||||||||||||||||||
Sbjct: 111678 gtccaacccctcccctcccc 111659

>gb|AC023174.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-25N12, complete
              sequence
          Length = 223266

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    cccctcccctccccactcgg 185
              ||||||||||||||||||||
Sbjct: 160516 cccctcccctccccactcgg 160535

>gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, complete sequence
          Length = 199837

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    agccccccagtccacctccg 227
              ||||||||||||||||||||
Sbjct: 158304 agccccccagtccacctccg 158285

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 233     gcgcgctcgcggcggcggaggaca 256
               ||||||||||||| ||||||||||
Sbjct: 1342867 gcgcgctcgcggccgcggaggaca 1342844

>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   aacccctcccctccccactc 183
             ||||||||||||||||||||
Sbjct: 91197 aacccctcccctccccactc 91216

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 114      ccagccgccacctcccctcc 133
                ||||||||||||||||||||
Sbjct: 13297650 ccagccgccacctcccctcc 13297669



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 34       ctcctccccgtcgctccagc 53
                ||||||||||||||||||||
Sbjct: 10809509 ctcctccccgtcgctccagc 10809490

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 232      agcgcgctcgcggcggcgga 251
                ||||||||||||||||||||
Sbjct: 22716505 agcgcgctcgcggcggcgga 22716486

>ref|XM_213523.3| PREDICTED: Rattus norvegicus similar to CG8841-PA (predicted)
            (LOC287822), mRNA
          Length = 3205

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  gcggcggcggaggacaccgg 260
            ||||||||||||||||||||
Sbjct: 1848 gcggcggcggaggacaccgg 1867

>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ctcctccccgtcgctccagc 53
             ||||||||||||||||||||
Sbjct: 33232 ctcctccccgtcgctccagc 33213

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    ccgtccagatccagccgcca 123
              ||||||||||||||||||||
Sbjct: 704181 ccgtccagatccagccgcca 704200

>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    ccagccgccacctcccctcc 133
              ||||||||||||||||||||
Sbjct: 119084 ccagccgccacctcccctcc 119103

>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046O12
          Length = 128223

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   agcgcgctcgcggcggcgga 251
             ||||||||||||||||||||
Sbjct: 75301 agcgcgctcgcggcggcgga 75282

>gb|AC005775.1|AC005775 Homo sapiens chromosome 19, cosmid F20237, complete sequence
          Length = 47991

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 154   gcacaggtccaacccctcccctccccac 181
             |||||||||| ||||||||||| |||||
Sbjct: 34887 gcacaggtcccacccctcccctgcccac 34914

>dbj|AK100801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G22, full
           insert sequence
          Length = 1009

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 agcgcgctcgcggcggcgga 251
           ||||||||||||||||||||
Sbjct: 460 agcgcgctcgcggcggcgga 479

>dbj|AK070620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062D09, full
           insert sequence
          Length = 3538

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  ctcctccccgtcgctccagc 53
           ||||||||||||||||||||
Sbjct: 391 ctcctccccgtcgctccagc 410

>emb|AL928586.10| Mouse DNA sequence from clone RP23-353H5 on chromosome 2, complete
             sequence
          Length = 105895

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gtccaacccctcccctcccc 179
             ||||||||||||||||||||
Sbjct: 93703 gtccaacccctcccctcccc 93684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,167,092
Number of Sequences: 3902068
Number of extensions: 2167092
Number of successful extensions: 114922
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114599
Number of HSP's gapped (non-prelim): 323
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)