Clone Name | bastl38c12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104798.1| Zea mays PCO063131 mRNA sequence Length = 546 Score = 44.1 bits (22), Expect = 0.11 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 cgcgggatgtcgccgtcgtcctcgcc 131 ||||||||| |||||||||||||||| Sbjct: 255 cgcgggatggcgccgtcgtcctcgcc 280
>ref|XM_550256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 42.1 bits (21), Expect = 0.44 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggc 134 ||||||||||||||||||||| Sbjct: 395 gtcgccgtcgtcctcgccggc 375
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.44 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggc 134 ||||||||||||||||||||| Sbjct: 3454761 gtcgccgtcgtcctcgccggc 3454741
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 42.1 bits (21), Expect = 0.44 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggc 134 ||||||||||||||||||||| Sbjct: 133131 gtcgccgtcgtcctcgccggc 133111
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 42.1 bits (21), Expect = 0.44 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggc 134 ||||||||||||||||||||| Sbjct: 22829 gtcgccgtcgtcctcgccggc 22809
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 42.1 bits (21), Expect = 0.44 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggc 134 ||||||||||||||||||||| Sbjct: 41521 gtcgccgtcgtcctcgccggc 41501
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 cgccgtcgtcctcgccggcgaagg 139 |||| ||||||||||||||||||| Sbjct: 538569 cgccatcgtcctcgccggcgaagg 538546
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcga 136 |||||||||||||||||||| Sbjct: 63187 gccgtcgtcctcgccggcga 63206
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgccgtcggcgggcgaggtc 91 |||||||||||||||||||| Sbjct: 1023954 cgccgtcggcgggcgaggtc 1023935
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gcttcgggctggtcgtcgccgtcg 79 |||||| ||||||||||||||||| Sbjct: 1437024 gcttcgcgctggtcgtcgccgtcg 1437001
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccgtcggcgggcgaggtc 91 |||||||||||||||||||| Sbjct: 2541749 cgccgtcggcgggcgaggtc 2541768
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cgccgtcgtcctcgccggcg 135 |||||||||||||||||||| Sbjct: 33780621 cgccgtcgtcctcgccggcg 33780602 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 32530131 cgtcgtcctcgccggcgaa 32530149 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggcga 136 |||| |||||||||||||||||| Sbjct: 26918041 gtcgtcgtcgtcctcgccggcga 26918019
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgccgtcgtcctcgccggcg 135 |||||||||||||||||||| Sbjct: 92619 cgccgtcgtcctcgccggcg 92638
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 1.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gcttcgggctggtcgtcgccgtcg 79 |||||| ||||||||||||||||| Sbjct: 2747944 gcttcgcgctggtcgtcgccgtcg 2747921
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgccgtcggcgggcgaggtc 91 |||||||||||||||||||| Sbjct: 1840772 cgccgtcggcgggcgaggtc 1840753
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcgccgtcgtcctcgccggc 134 |||||||||||||||||||| Sbjct: 46629 tcgccgtcgtcctcgccggc 46610
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gggctggtcgtcgccgtcgg 80 |||||||||||||||||||| Sbjct: 2452013 gggctggtcgtcgccgtcgg 2451994 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gggctggtcgtcgccgtcgg 80 |||||||||||||||||||| Sbjct: 2310186 gggctggtcgtcgccgtcgg 2310167 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gggctggtcgtcgccgtcgg 80 |||||||||||||||||||| Sbjct: 1214209 gggctggtcgtcgccgtcgg 1214190
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcgccgtcgtcctcgccggc 134 |||||||||||||||||||| Sbjct: 16796198 tcgccgtcgtcctcgccggc 16796179
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gccgtcgtcctcgccggcga 136 |||||||||||||||||||| Sbjct: 3351107 gccgtcgtcctcgccggcga 3351088 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||| ||||||||||||||||| Sbjct: 18257075 tgtcgtcgtcgtcctcgccggcg 18257053
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cgccgtcgtcctcgccggcg 135 |||||||||||||||||||| Sbjct: 33871093 cgccgtcgtcctcgccggcg 33871074 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 32620641 cgtcgtcctcgccggcgaa 32620659 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggcga 136 |||| |||||||||||||||||| Sbjct: 27009364 gtcgtcgtcgtcctcgccggcga 27009342 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 24765951 ggatgtagccgtcgtcctcgccg 24765929
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgggatgtcgccgtcgtcct 127 |||||||||||||||||||| Sbjct: 3906042 cgggatgtcgccgtcgtcct 3906061 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 32704990 gtcgccgtcgtcctcgccg 32704972 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 10120836 gccgtcgtcctcgccggcg 10120854
>gb|AE004525.1| Pseudomonas aeruginosa PAO1, section 86 of 529 of the complete genome Length = 10434 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcg 129 |||||||||||||||||||| Sbjct: 6841 ggatgtcgccgtcgtcctcg 6822
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cgggctggtcgtcgccgtcg 79 |||||||||||||||||||| Sbjct: 2531306 cgggctggtcgtcgccgtcg 2531287
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgggatgtcgccgtcgtcct 127 |||||||||||||||||||| Sbjct: 162374 cgggatgtcgccgtcgtcct 162393
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cgggatgtcgccgtcgtcct 127 |||||||||||||||||||| Sbjct: 104513 cgggatgtcgccgtcgtcct 104532
>dbj|AK107512.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E12, full insert sequence Length = 1901 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcga 136 |||||||||||||||||||| Sbjct: 180 gccgtcgtcctcgccggcga 199
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 cgctctgctcgcctctgctt 59 |||||||||||||||||||| Sbjct: 52865 cgctctgctcgcctctgctt 52846
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 1.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gccgtcgtcctcgccggcga 136 |||||||||||||||||||| Sbjct: 3359812 gccgtcgtcctcgccggcga 3359793 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||| ||||||||||||||||| Sbjct: 18416355 tgtcgtcgtcgtcctcgccggcg 18416333
>gb|AY838901.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 5 (NCED5) mRNA, complete cds Length = 2041 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 1782 ggatgtagccgtcgtcctcgccg 1760
>gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid dioxygenase 3 (NCED3) mRNA, complete cds Length = 2060 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 1839 ggatgtagccgtcgtcctcgccg 1817
>ref|NM_102309.3| Arabidopsis thaliana unknown protein AT1G24706 mRNA, complete cds Length = 5844 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 33 ccgcttccgctctgctcgcctct 55 ||||||||||||||||| ||||| Sbjct: 5514 ccgcttccgctctgctctcctct 5492
>ref|XM_482907.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctc 128 ||||||||||||||||||| Sbjct: 396 ggatgtcgccgtcgtcctc 378
>ref|XM_482144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 456 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 293 gccgtcgtcctcgccggcg 275
>ref|XM_469926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1722 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 642 cgtcgtcctcgccggcgaa 624
>ref|XM_468042.1| Oryza sativa (japonica cultivar-group), mRNA Length = 514 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 329 gtcgccgtcgtcctcgccg 347
>ref|XM_507003.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1611_C08.37 mRNA Length = 681 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 326 gtcgccgtcgtcctcgccg 344
>ref|XM_464935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 258 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 27 gccgtcgtcctcgccggcg 45
>ref|XM_526122.1| PREDICTED: Pan troglodytes similar to sulfatase modifying factor 1; C-alpha-formylglycine-generating enzyme (LOC470739), mRNA Length = 1263 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 7 ttcccggcctcctcactcccctg 29 |||||||||||||| |||||||| Sbjct: 135 ttcccggcctcctcgctcccctg 113
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggcga 136 |||| |||||||||||||||||| Sbjct: 690 gtcgtcgtcgtcctcgccggcga 668
>ref|XM_479393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1326 Score = 38.2 bits (19), Expect = 6.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcgaagg 139 ||||||||||| | ||||||||||||| Sbjct: 568 tgtcgccgtcgccgtcgccggcgaagg 542
>gb|AC005222.1| Homo sapiens chromosome 16, cosmid clone RT163 (LANL), complete sequence Length = 40619 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 ggcctcctcactcccctgtcccc 34 |||||||||||| |||||||||| Sbjct: 16346 ggcctcctcactgccctgtcccc 16324
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||| ||||||||||||||||| Sbjct: 115671 tgtcgtcgtcgtcctcgccggcg 115649
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 gcctcctcactcccctgtc 31 ||||||||||||||||||| Sbjct: 39251 gcctcctcactcccctgtc 39233
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||| ||||||||||||||||| Sbjct: 24334 tgtcgtcgtcgtcctcgccggcg 24312
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 38.2 bits (19), Expect = 6.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 17 cctcactcccctgtccccgcttccgctctgc 47 |||| |||||||||||||||| |||| |||| Sbjct: 806106 cctctctcccctgtccccgctcccgcactgc 806136
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 63 gctggtcgtcgccgtcggcgggc 85 ||||||| ||||||||||||||| Sbjct: 4537140 gctggtcatcgccgtcggcgggc 4537118
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccggcga 136 |||| |||||||||||||||||| Sbjct: 97041 gtcgtcgtcgtcctcgccggcga 97019
>ref|XM_964857.1| PREDICTED: Tribolium castaneum similar to CG10984-PC, isoform C (LOC658469), mRNA Length = 1749 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 114 gtcgccgtcgtcctcgccggcga 136 |||||||||| |||||||||||| Sbjct: 789 gtcgccgtcggcctcgccggcga 811
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaaggtc 141 ||||||||||||||| ||||||| Sbjct: 36169 cgtcgtcctcgccggtgaaggtc 36191
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaaggtc 141 ||||||||||||||| ||||||| Sbjct: 292838 cgtcgtcctcgccggtgaaggtc 292860
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 63 gctggtcgtcgccgtcggcgggc 85 |||| |||||||||||||||||| Sbjct: 49379 gctgctcgtcgccgtcggcgggc 49401
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 60 cgggctggtcgtcgccgtcggcg 82 ||||||||||||||| ||||||| Sbjct: 283560 cgggctggtcgtcgcggtcggcg 283538
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 234765 gccgtcgtcctcgccggcg 234783
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 120 gtcgtcctcgccggcgaag 138 ||||||||||||||||||| Sbjct: 1196831 gtcgtcctcgccggcgaag 1196849
>gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, complete sequence Length = 201723 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 tcccggcctcctcactccc 26 ||||||||||||||||||| Sbjct: 87884 tcccggcctcctcactccc 87866
>emb|AJ582955.1| Oryza sativa (japonica cultivar-group) partial mRNA for glycoprotein 3-alpha-L-fucosyltransferase (FUT11 gene) Length = 1419 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctc 128 ||||||||||||||||||| Sbjct: 178 ggatgtcgccgtcgtcctc 160
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 144640 ggatgtagccgtcgtcctcgccg 144618
>gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, complete sequence Length = 172071 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 ggcctcctcactcccctgtcccc 34 |||||||||||| |||||||||| Sbjct: 75332 ggcctcctcactgccctgtcccc 75310
>gb|AE009858.1|AE009858 Pyrobaculum aerophilum strain IM2 section 113 of 201 of the complete genome Length = 14169 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 1372 gccgtcgtcctcgccggcg 1390
>emb|CR478112.2| Mouse DNA sequence from clone WI1-2389C6 on chromosome X, complete sequence Length = 30869 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 cggcgggcgaggtcacacg 96 ||||||||||||||||||| Sbjct: 3622 cggcgggcgaggtcacacg 3604
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 gctggtcgtcgccgtcggc 81 ||||||||||||||||||| Sbjct: 556733 gctggtcgtcgccgtcggc 556715
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 63 gctggtcgtcgccgtcggcgggc 85 ||||||| ||||||||||||||| Sbjct: 4983408 gctggtcttcgccgtcggcgggc 4983430
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 115 tcgccgtcgtcctcgccgg 133 ||||||||||||||||||| Sbjct: 2002612 tcgccgtcgtcctcgccgg 2002630
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 26303567 ggatgtagccgtcgtcctcgccg 26303545
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||||||||||| ||||||||| Sbjct: 23901030 tgtcgccgtcgtcgtcgccggcg 23901052 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctc 128 ||||||||||||||||||| Sbjct: 23266474 ggatgtcgccgtcgtcctc 23266456 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 18154064 gccgtcgtcctcgccggcg 18154082
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 6.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcgaagg 139 ||||||||||| | ||||||||||||| Sbjct: 27532130 tgtcgccgtcgccgtcgccggcgaagg 27532104
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 ctggtcgtcgccgtcggcg 82 ||||||||||||||||||| Sbjct: 8124332 ctggtcgtcgccgtcggcg 8124350
>gb|AC004133.3|AC004133 Genomic sequence for Arabidopsis thaliana BAC F5A9 from chromosome I, complete sequence Length = 105863 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 ccgcttccgctctgctcgcctct 55 ||||||||||||||||| ||||| Sbjct: 76116 ccgcttccgctctgctctcctct 76138
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 63580 cgtcgtcctcgccggcgaa 63598
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 38.2 bits (19), Expect = 6.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcgaagg 139 ||||||||||| | ||||||||||||| Sbjct: 96101 tgtcgccgtcgccgtcgccggcgaagg 96075
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||||||||||| ||||||||| Sbjct: 92734 tgtcgccgtcgtcgtcgccggcg 92756
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctc 128 ||||||||||||||||||| Sbjct: 65825 ggatgtcgccgtcgtcctc 65807
>dbj|AB097904.1| Streptomyces carzinostaticus DNA, biosynthetic gene cluster for antitumor antibiotic Neocarzilin, complete and partial cds Length = 33079 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 118 ccgtcgtcctcgccggcga 136 ||||||||||||||||||| Sbjct: 14579 ccgtcgtcctcgccggcga 14597
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 68530 gccgtcgtcctcgccggcg 68548
>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1448_G06 Length = 136823 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 33225 gtcgccgtcgtcctcgccg 33207
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 132361 gtcgccgtcgtcctcgccg 132343
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||||||||||| ||||||||| Sbjct: 34181 tgtcgccgtcgtcgtcgccggcg 34203
>dbj|AK109915.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C06, full insert sequence Length = 1961 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 tgtcgccgtcgtcctcgccggcg 135 ||||| ||||||||||||||||| Sbjct: 832 tgtcgtcgtcgtcctcgccggcg 810
>dbj|AK107755.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A03, full insert sequence Length = 455 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 292 gccgtcgtcctcgccggcg 274
>dbj|AK107649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F10, full insert sequence Length = 1475 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 694 ggatgtagccgtcgtcctcgccg 672
>dbj|AK106804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C02, full insert sequence Length = 1689 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 425 cgtcgtcctcgccggcgaa 407
>dbj|AK105547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A06, full insert sequence Length = 1636 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 cgtcgtcctcgccggcgaa 137 ||||||||||||||||||| Sbjct: 772 cgtcgtcctcgccggcgaa 790
>dbj|AK099681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071F22, full insert sequence Length = 2097 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctc 128 ||||||||||||||||||| Sbjct: 395 ggatgtcgccgtcgtcctc 377
>dbj|AK066815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084M15, full insert sequence Length = 514 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 329 gtcgccgtcgtcctcgccg 347
>dbj|AK064163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-G09, full insert sequence Length = 681 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 gtcgccgtcgtcctcgccg 132 ||||||||||||||||||| Sbjct: 326 gtcgccgtcgtcctcgccg 344
>gb|DQ355971.1| Homo sapiens CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB) gene, complete cds Length = 127833 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 ctcttcccggcctcctcac 22 ||||||||||||||||||| Sbjct: 44802 ctcttcccggcctcctcac 44784
>gb|AF098965.1|AF098965 Streptomyces arenae strain DSM40737 beta-ketoacyl synthase/acyl transferase (ncnA), chain length factor (ncnB), acyl carrier protein (ncnC), and aromatase (ncnD) genes, complete cds Length = 5500 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 4097 gccgtcgtcctcgccggcg 4079
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 tcgggctggtcgtcgccgt 77 ||||||||||||||||||| Sbjct: 626487 tcgggctggtcgtcgccgt 626505
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 26231743 ggatgtagccgtcgtcctcgccg 26231721
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 67551 ggatgtagccgtcgtcctcgccg 67529
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 38.2 bits (19), Expect = 6.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 110 ggatgtcgccgtcgtcctcgccg 132 |||||| |||||||||||||||| Sbjct: 17846 ggatgtagccgtcgtcctcgccg 17824
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 cctctgcttcgggctggtc 69 ||||||||||||||||||| Sbjct: 2450043 cctctgcttcgggctggtc 2450025
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 117 gccgtcgtcctcgccggcg 135 ||||||||||||||||||| Sbjct: 157860 gccgtcgtcctcgccggcg 157878
>emb|AL133455.4|CNS01DV6 Human chromosome 14 DNA sequence BAC C-2538G10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 137833 Score = 38.2 bits (19), Expect = 6.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 ctcttcccggcctcctcac 22 ||||||||||||||||||| Sbjct: 90962 ctcttcccggcctcctcac 90980 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 851,413 Number of Sequences: 3902068 Number of extensions: 851413 Number of successful extensions: 78903 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74291 Number of HSP's gapped (non-prelim): 4612 length of query: 143 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 122 effective length of database: 17,151,101,840 effective search space: 2092434424480 effective search space used: 2092434424480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)