ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4014 Score = 218 bits (110), Expect = 1e-53 Identities = 374/462 (80%) Strand = Plus / Plus Query: 20 gttattgatggcccccgtatccttgtaactccgctccatttgggcctcatgccaccccct 79 ||||||||||| ||| | ||||||||||||| ||| |||||| |||||||||||||| Sbjct: 1072 gttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccacccccc 1131 Query: 80 atgtctctgttccatctcgcatttccttgtgcagtgaatgaggtttgttttgtatccaag 139 |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||||| | Sbjct: 1132 atgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctat 1191 Query: 140 aactcaaagaaccatttgactgcttatctttcaaatggcagcttatgtgttgtggaattt 199 ||||| || |||||| | ||||||||||||| ||||||||||| ||||| || | || Sbjct: 1192 aactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtactt 1251 Query: 200 ccagcagcagatacatgggaagaatttgagggcaatgggataactgttgacccttgccat 259 || | |||||||| |||||||| ||||| |||| ||| |||| ||||||||||||| | Sbjct: 1252 ccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttt 1311 Query: 260 tgtgacttcagtttgaataattctatgcatctcacttggatagatacacgtaccttaatt 319 | ||| | | |||||||| | |||||| || |||||||| ||||| ||||||| || Sbjct: 1312 tctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatc 1371 Query: 320 ggtatctgtggctgcagtgattactgctcttcaacacccatgaggtccagtgaagctggt 379 || || ||| || || |||| || |||||||||||| |||||||||||||||||| || Sbjct: 1372 ggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagt 1431 Query: 380 aacttcgaagaaaaacatgattctctgttctttgtcaatgagattaaacttgtatgttcc 439 | | | ||| ||| |||| || | | ||| ||||||||||| |||||||||||||| Sbjct: 1432 agccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttcc 1491 Query: 440 gaggactgtttgccaggttcagtgagttcatctggttggcag 481 ||||| | ||||| |||||||| ||||||| ||||||||| Sbjct: 1492 gaggattctttgctaggttcagcctgttcatcaggttggcag 1533
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 218 bits (110), Expect = 1e-53 Identities = 374/462 (80%) Strand = Plus / Plus Query: 20 gttattgatggcccccgtatccttgtaactccgctccatttgggcctcatgccaccccct 79 ||||||||||| ||| | ||||||||||||| ||| |||||| |||||||||||||| Sbjct: 22514133 gttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccacccccc 22514192 Query: 80 atgtctctgttccatctcgcatttccttgtgcagtgaatgaggtttgttttgtatccaag 139 |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||||| | Sbjct: 22514193 atgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctat 22514252 Query: 140 aactcaaagaaccatttgactgcttatctttcaaatggcagcttatgtgttgtggaattt 199 ||||| || |||||| | ||||||||||||| ||||||||||| ||||| || | || Sbjct: 22514253 aactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtactt 22514312 Query: 200 ccagcagcagatacatgggaagaatttgagggcaatgggataactgttgacccttgccat 259 || | |||||||| |||||||| ||||| |||| ||| |||| ||||||||||||| | Sbjct: 22514313 ccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttt 22514372 Query: 260 tgtgacttcagtttgaataattctatgcatctcacttggatagatacacgtaccttaatt 319 | ||| | | |||||||| | |||||| || |||||||| ||||| ||||||| || Sbjct: 22514373 tctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatc 22514432 Query: 320 ggtatctgtggctgcagtgattactgctcttcaacacccatgaggtccagtgaagctggt 379 || || ||| || || |||| || |||||||||||| |||||||||||||||||| || Sbjct: 22514433 ggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagt 22514492 Query: 380 aacttcgaagaaaaacatgattctctgttctttgtcaatgagattaaacttgtatgttcc 439 | | | ||| ||| |||| || | | ||| ||||||||||| |||||||||||||| Sbjct: 22514493 agccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttcc 22514552 Query: 440 gaggactgtttgccaggttcagtgagttcatctggttggcag 481 ||||| | ||||| |||||||| ||||||| ||||||||| Sbjct: 22514553 gaggattctttgctaggttcagcctgttcatcaggttggcag 22514594
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 218 bits (110), Expect = 1e-53 Identities = 374/462 (80%) Strand = Plus / Plus Query: 20 gttattgatggcccccgtatccttgtaactccgctccatttgggcctcatgccaccccct 79 ||||||||||| ||| | ||||||||||||| ||| |||||| |||||||||||||| Sbjct: 57621 gttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccacccccc 57680 Query: 80 atgtctctgttccatctcgcatttccttgtgcagtgaatgaggtttgttttgtatccaag 139 |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||||| | Sbjct: 57681 atgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctat 57740 Query: 140 aactcaaagaaccatttgactgcttatctttcaaatggcagcttatgtgttgtggaattt 199 ||||| || |||||| | ||||||||||||| ||||||||||| ||||| || | || Sbjct: 57741 aactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtactt 57800 Query: 200 ccagcagcagatacatgggaagaatttgagggcaatgggataactgttgacccttgccat 259 || | |||||||| |||||||| ||||| |||| ||| |||| ||||||||||||| | Sbjct: 57801 ccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttt 57860 Query: 260 tgtgacttcagtttgaataattctatgcatctcacttggatagatacacgtaccttaatt 319 | ||| | | |||||||| | |||||| || |||||||| ||||| ||||||| || Sbjct: 57861 tctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatc 57920 Query: 320 ggtatctgtggctgcagtgattactgctcttcaacacccatgaggtccagtgaagctggt 379 || || ||| || || |||| || |||||||||||| |||||||||||||||||| || Sbjct: 57921 ggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagt 57980 Query: 380 aacttcgaagaaaaacatgattctctgttctttgtcaatgagattaaacttgtatgttcc 439 | | | ||| ||| |||| || | | ||| ||||||||||| |||||||||||||| Sbjct: 57981 agccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttcc 58040 Query: 440 gaggactgtttgccaggttcagtgagttcatctggttggcag 481 ||||| | ||||| |||||||| ||||||| ||||||||| Sbjct: 58041 gaggattctttgctaggttcagcctgttcatcaggttggcag 58082
>dbj|AK121078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J19, full insert sequence Length = 4593 Score = 218 bits (110), Expect = 1e-53 Identities = 374/462 (80%) Strand = Plus / Plus Query: 20 gttattgatggcccccgtatccttgtaactccgctccatttgggcctcatgccaccccct 79 ||||||||||| ||| | ||||||||||||| ||| |||||| |||||||||||||| Sbjct: 1208 gttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccacccccc 1267 Query: 80 atgtctctgttccatctcgcatttccttgtgcagtgaatgaggtttgttttgtatccaag 139 |||||| |||||||||| ||||||||||||| ||||||||||||| |||| ||||| | Sbjct: 1268 atgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctat 1327 Query: 140 aactcaaagaaccatttgactgcttatctttcaaatggcagcttatgtgttgtggaattt 199 ||||| || |||||| | ||||||||||||| ||||||||||| ||||| || | || Sbjct: 1328 aactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtactt 1387 Query: 200 ccagcagcagatacatgggaagaatttgagggcaatgggataactgttgacccttgccat 259 || | |||||||| |||||||| ||||| |||| ||| |||| ||||||||||||| | Sbjct: 1388 ccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttt 1447 Query: 260 tgtgacttcagtttgaataattctatgcatctcacttggatagatacacgtaccttaatt 319 | ||| | | |||||||| | |||||| || |||||||| ||||| ||||||| || Sbjct: 1448 tctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatc 1507 Query: 320 ggtatctgtggctgcagtgattactgctcttcaacacccatgaggtccagtgaagctggt 379 || || ||| || || |||| || |||||||||||| |||||||||||||||||| || Sbjct: 1508 ggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagt 1567 Query: 380 aacttcgaagaaaaacatgattctctgttctttgtcaatgagattaaacttgtatgttcc 439 | | | ||| ||| |||| || | | ||| ||||||||||| |||||||||||||| Sbjct: 1568 agccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttcc 1627 Query: 440 gaggactgtttgccaggttcagtgagttcatctggttggcag 481 ||||| | ||||| |||||||| ||||||| ||||||||| Sbjct: 1628 gaggattctttgctaggttcagcctgttcatcaggttggcag 1669
>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence Length = 195068 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 atgattctctgttctttgtcaa 417 |||||||||||||||||||||| Sbjct: 58476 atgattctctgttctttgtcaa 58497
>emb|BX004793.12| Mouse DNA sequence from clone RP23-188D9 on chromosome 2, complete sequence Length = 161514 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 396 atgattctctgttctttgtcaa 417 |||||||||||||||||||||| Sbjct: 138592 atgattctctgttctttgtcaa 138571
>gb|L04224.1|HUMSCN4A09 Homo sapiens skeletal muscle sodium channel alpha subunit (SCN4A) gene, exon 12 Length = 291 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gggcctcatgccaccccctatgtct 85 |||||||||||||||||||| |||| Sbjct: 65 gggcctcatgccaccccctaggtct 89
>gb|AF241732.1| Homo sapiens chromosome X clone XXcos-P117 map p11.4, complete sequence Length = 42930 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tcagtttgaataattctatgc 287 ||||||||||||||||||||| Sbjct: 17386 tcagtttgaataattctatgc 17366
>gb|AF241731.2| Homo sapiens chromosome X clone LL0XNC01-45P13 map p11.4, complete sequence Length = 44977 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tcagtttgaataattctatgc 287 ||||||||||||||||||||| Sbjct: 36310 tcagtttgaataattctatgc 36290
>gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete sequence Length = 196157 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 tccgaggactgtttgccaggt 457 ||||||||||||||||||||| Sbjct: 137159 tccgaggactgtttgccaggt 137179
>gb|AC150308.1| Latimeria menadoensis clone VMRC4-24C12, complete sequence Length = 150025 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 tccgaggactgtttgccaggt 457 ||||||||||||||||||||| Sbjct: 3527 tccgaggactgtttgccaggt 3547
>gb|AC134603.4| Mus musculus BAC clone RP23-246L24 from chromosome 7, complete sequence Length = 229312 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 ccatctcgcatttccttgtgcagtg 115 ||||||| ||||||||||||||||| Sbjct: 120942 ccatctcacatttccttgtgcagtg 120966
>emb|AL356133.17| Human DNA sequence from clone RP11-337A23 on chromosome 9 Contains a novel gene (FLJ13657), the PLAA gene for phospholipase A2-activating protein (PLAP), a novel gene, the 5' end of capillary morphogenesis protein 1 (CMG-1, FLJ22621)(CMG1) and 3 CpG islands, complete sequence Length = 187805 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 394 acatgattctctgttctttgtcaat 418 ||||| ||||||||||||||||||| Sbjct: 127042 acatgtttctctgttctttgtcaat 127018
>emb|AL024505.1|HS112L6 Human DNA sequence from clone RP1-112L6 on chromosome 6q16, complete sequence Length = 144097 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 agaaaaacatgattctctgtt 408 ||||||||||||||||||||| Sbjct: 39475 agaaaaacatgattctctgtt 39495
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 actgcttatctttcaaatggcagct 182 |||||||||| |||||||||||||| Sbjct: 142210 actgcttatccttcaaatggcagct 142234
>emb|AL645747.11| Mouse DNA sequence from clone RP23-436D9 on chromosome 11 Contains a novel gene and a signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam) pseudogene, complete sequence Length = 172052 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tgaggtttgttttgtatccaa 138 ||||||||||||||||||||| Sbjct: 73997 tgaggtttgttttgtatccaa 74017
>dbj|AK144891.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730048N05 product:unclassifiable, full insert sequence Length = 1359 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgaggtttgttttgtatccaa 138 ||||||||||||||||||||| Sbjct: 209 tgaggtttgttttgtatccaa 189
>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4, complete sequence Length = 160565 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tcagtttgaataattctatgc 287 ||||||||||||||||||||| Sbjct: 88914 tcagtttgaataattctatgc 88894
>gb|AC127029.12| Homo sapiens chromosome 17, clone CTC-264K15, complete sequence Length = 101990 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gggcctcatgccaccccctatgtct 85 |||||||||||||||||||| |||| Sbjct: 68588 gggcctcatgccaccccctaggtct 68564
>emb|AL935058.12| Mouse DNA sequence from clone RP23-409M4 on chromosome 2, complete sequence Length = 143502 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ttctttgtcaatgagattaaa 427 ||||||||||||||||||||| Sbjct: 133163 ttctttgtcaatgagattaaa 133183
>gb|AC005803.1|AC005803 Homo sapiens chromosome 17, clone hRPK.214_C_8, complete sequence Length = 162473 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 gggcctcatgccaccccctatgtct 85 |||||||||||||||||||| |||| Sbjct: 40161 gggcctcatgccaccccctaggtct 40137
>gb|L01971.1|HUMSCNA10 Human type IV sodium channel alpha polypeptide (SCN4A) gene, exon 12 Length = 274 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gggcctcatgccaccccctatgtct 85 |||||||||||||||||||| |||| Sbjct: 30 gggcctcatgccaccccctaggtct 54
>ref|NM_113447.1| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor AT3G25510 mRNA, complete cds Length = 5946 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ttgttttgtatccaagaact 143 |||||||||||||||||||| Sbjct: 5112 ttgttttgtatccaagaact 5093
>gb|AC163041.3| Mus musculus BAC clone RP23-32K16 from chromosome 12, complete sequence Length = 254666 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atttccagcagcagatacat 215 |||||||||||||||||||| Sbjct: 84642 atttccagcagcagatacat 84623
>gb|AC156037.6| Mus musculus BAC clone RP23-138L1 from chromosome 12, complete sequence Length = 217016 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atttccagcagcagatacat 215 |||||||||||||||||||| Sbjct: 214121 atttccagcagcagatacat 214102
>gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, complete sequence Length = 156357 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gacttcagtttgaataattc 282 |||||||||||||||||||| Sbjct: 77468 gacttcagtttgaataattc 77487
>gb|AY554373.1| Takifugu rubripes claudin 28c (cldn28c) gene, complete cds Length = 1320 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tgacttcagtttgaataatt 281 |||||||||||||||||||| Sbjct: 1202 tgacttcagtttgaataatt 1183
>gb|AC148310.2| Pan troglodytes BAC clone RP43-31J11 from 7, complete sequence Length = 203635 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 agtgagttcatctggttggcagct 483 ||||||||| |||||||||||||| Sbjct: 81074 agtgagttcctctggttggcagct 81097
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 tttccagcagcagatacatgggaa 220 ||||||||||| |||||||||||| Sbjct: 1637893 tttccagcagccgatacatgggaa 1637916
>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence Length = 233904 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 atgattctctgttctttgtc 415 |||||||||||||||||||| Sbjct: 223034 atgattctctgttctttgtc 223053
>gb|AC165160.3| Mus musculus BAC clone RP23-200E23 from chromosome 3, complete sequence Length = 183763 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 aaaacatgattctctgttctttgt 414 |||| ||||||||||||||||||| Sbjct: 54081 aaaagatgattctctgttctttgt 54058
>gb|AC153662.6| Mus musculus BAC clone RP23-24I10 from chromosome 12, complete sequence Length = 216041 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atttccagcagcagatacat 215 |||||||||||||||||||| Sbjct: 160840 atttccagcagcagatacat 160821
>gb|AC092825.5| Homo sapiens 3 BAC RP11-171G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ttgaataattctatgcatct 291 |||||||||||||||||||| Sbjct: 18151 ttgaataattctatgcatct 18170
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atacatgggaagaatttgag 229 |||||||||||||||||||| Sbjct: 4581563 atacatgggaagaatttgag 4581582
>gb|AC132472.3| Mus musculus BAC clone RP23-113B13 from chromosome 12, complete sequence Length = 214333 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atttccagcagcagatacat 215 |||||||||||||||||||| Sbjct: 109698 atttccagcagcagatacat 109717
>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 atgattctctgttctttgtc 415 |||||||||||||||||||| Sbjct: 66164 atgattctctgttctttgtc 66145
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 atttgagggcaatgggataa 242 |||||||||||||||||||| Sbjct: 850647 atttgagggcaatgggataa 850628
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atacatgggaagaatttgag 229 |||||||||||||||||||| Sbjct: 116250 atacatgggaagaatttgag 116269
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ttgttttgtatccaagaact 143 |||||||||||||||||||| Sbjct: 48728 ttgttttgtatccaagaact 48747
>emb|CR759914.21| Zebrafish DNA sequence from clone DKEY-266I6 in linkage group 19, complete sequence Length = 112886 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aagaactcaaagaaccattt 156 |||||||||||||||||||| Sbjct: 20736 aagaactcaaagaaccattt 20717
>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2 Contains the GADD45A gene for growth arrest and DNA-damage-inducible alpha, the 3' end of the GNG12 gene for guanine nucleotide binding protein (G protein) gamma 12 and a CpG island, complete sequence Length = 104198 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tgtttgccaggttcagtgag 465 |||||||||||||||||||| Sbjct: 21342 tgtttgccaggttcagtgag 21361
>gb|AY104256.1| Zea mays PCO116634 mRNA sequence Length = 995 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 atccaagaactcaaagaacc 152 |||||||||||||||||||| Sbjct: 805 atccaagaactcaaagaacc 824
>dbj|AP002387.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-660L16, complete sequence Length = 170523 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 agtgagttcatctggttggcagct 483 ||||||||| |||||||||||||| Sbjct: 166146 agtgagttcctctggttggcagct 166123
>gb|AC174773.1| Gasterosteus aculeatus clone VMRC28-91K14, complete sequence Length = 153630 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 tgagattaaacttgtatgtt 437 |||||||||||||||||||| Sbjct: 30513 tgagattaaacttgtatgtt 30494
>gb|AC122351.5| Mus musculus BAC clone RP23-388H1 from 12, complete sequence Length = 201060 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atttccagcagcagatacat 215 |||||||||||||||||||| Sbjct: 972 atttccagcagcagatacat 953
>dbj|AP000867.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences Length = 199999 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 agtgagttcatctggttggcagct 483 ||||||||| |||||||||||||| Sbjct: 71945 agtgagttcctctggttggcagct 71922 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,923,580 Number of Sequences: 3902068 Number of extensions: 4923580 Number of successful extensions: 96899 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96727 Number of HSP's gapped (non-prelim): 172 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
