Clone Name | bastl38c08 |
---|---|
Clone Library Name | barley_pub |
>CMC2_CAEEL (Q20799) Probable calcium-binding mitochondrial carrier F55A11.4| Length = 588 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -1 Query: 399 VRMSFVAVHIRIRTASGWVIALPGDRPGVHPGLPSGTEILVTSKFLLKGFAVPSMLLQLR 220 V +S+V V+ ++RT G + G +H LP ++ F + F + LR Sbjct: 516 VSISYV-VYEKVRTGLGVPVCSRGGLEDIHQFLPCSIHSIIQFFFFPRTFLLTISGRSLR 574 Query: 219 LKPSCNAHFS 190 +KP +HFS Sbjct: 575 VKPVWRSHFS 584
>YQKA_SCHPO (O74522) Protein C1494.10 in chromosome III| Length = 964 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 146 PGSREGGLPAHRPWPVPKSPKGREEHGKTEETENTRASSLPN 21 P + GG+P P PV P ++H + T + A +LP+ Sbjct: 461 PVKQVGGMPLQSPLPVSMKPSA-DDHSRATPTRSVEAPTLPS 501
>PRIA_BACSU (P94461) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase| priA) (Replication factor Y) Length = 805 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -3 Query: 274 LKIPFKRLCGAVDAPAAEVKAVVQRALLADAERE 173 +KIP LC D +A +K ++Q+ LL ++ E Sbjct: 216 VKIPAAELCKKTDTSSATIKTLIQKGLLKESYEE 249
>SYS_CAUCR (Q9A6T4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 482 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -2 Query: 104 PVPKSPKGREEHGKTEETENTRASSLPNGR 15 P P+ P G +EHG E+ A+ LP G+ Sbjct: 109 PAPEVPAGEDEHGNLEQRRWGDATKLPAGK 138
>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor| Length = 639 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 134 EGGLPAHRPWPVPKSPKGREEHGKTEETENTRASSLPNGR 15 EG P P+P P+ P EEH + EE E R G+ Sbjct: 96 EGEQPRPFPFPRPRQPHQEEEHEQKEEHEWHRKEEKHGGK 135
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -2 Query: 119 AHRPWPVPKSPKGREEHGKTEETENTRASSLP 24 A RP PVPK P G + G+ E+TE SS P Sbjct: 677 AARPLPVPKLPPGEQCEGE-EDTEYMTPSSRP 707
>YB1D_SCHPO (P87178) Hypothetical protein C3D6.13c in chromosome II| Length = 726 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 Query: 98 PKSPKGREEHGKTEETENTRASSLPNG 18 P PK +EE TEETE ++ S P G Sbjct: 254 PSFPKEKEEKENTEETEESKKSINPTG 280
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 155 GDVDIPFPFGIGEKCALHDGFNLSCRSIDGTAKPFK 262 G + IP P +G+ L GF IDG KPFK Sbjct: 155 GKIPIPAPADLGDLSGLEAGFKAPIAMIDG--KPFK 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,092,995 Number of Sequences: 219361 Number of extensions: 1337258 Number of successful extensions: 4402 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4395 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)