ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38c08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcgag 193 ||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 17899261 ggctgcccgaccaagtgcggcgccgtggacatcccgttcccgttcggcatcggcgag 17899205 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 17953242 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 17953187 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 17916522 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 17916467 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcgagaag 196 ||||||||| | | ||||||| || ||||||||||||||||||| ||||||||||| || Sbjct: 17924652 ggctgccagacgaggtgcggcaacctcgacatcccgttcccgtttggcatcggcgatcag 17924593 Query: 197 tgcgcg 202 |||||| Sbjct: 17924592 tgcgcg 17924587 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 155 ggcgacgtcgacatcccgttcccgttcggcatcggcgagaagtgcgcgttgca 207 ||||||||||| |||||||||||||||||||||||| || | |||||| |||| Sbjct: 17941817 ggcgacgtcgagatcccgttcccgttcggcatcggcaagcactgcgcgatgca 17941765 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 133 tcccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||||| || | ||| ||||| ||||| |||| ||||||||| ||||||||| | Sbjct: 12437045 tcccggctgcccggagaggtgtggcgatgtcgagatcctgttcccgtttggcatcggcaa 12436986 Query: 193 gaagtgcgcgttgca 207 | |||||||| |||| Sbjct: 12436985 gcagtgcgcgatgca 12436971 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatc 187 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 17910659 gtgcggcgacgtcgacatcccctaccctttcggcatc 17910623 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 22047503 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 22047542 Score = 48.1 bits (24), Expect = 0.026 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 272 gaggtgaccaagatctcggtgccagacggc-aggcctggatgaa 314 ||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 12449119 gaggtgaccaagatctccctggcagacggcaaggcctggatgaa 12449076 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| | | ||||| || ||| || ||||| ||||||||||||||||| Sbjct: 12449272 ggctgccagacgaggtgcgacgtcgtggatatcccattcccgttcggcatcgg 12449220 Score = 40.1 bits (20), Expect = 6.3 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 272 gaggtgaccaagatctcggtgccagacggc-aggcctggatgaa 314 ||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 17899111 gaggtgaccaagatctccatggaagacggcaaggcctggatgaa 17899068
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcgag 193 ||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 50080 ggctgcccgaccaagtgcggcgccgtggacatcccgttcccgttcggcatcggcgag 50024 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 104061 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 104006 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 67341 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 67286 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcgagaag 196 ||||||||| | | ||||||| || ||||||||||||||||||| ||||||||||| || Sbjct: 75471 ggctgccagacgaggtgcggcaacctcgacatcccgttcccgtttggcatcggcgatcag 75412 Query: 197 tgcgcg 202 |||||| Sbjct: 75411 tgcgcg 75406 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 155 ggcgacgtcgacatcccgttcccgttcggcatcggcgagaagtgcgcgttgca 207 ||||||||||| |||||||||||||||||||||||| || | |||||| |||| Sbjct: 92636 ggcgacgtcgagatcccgttcccgttcggcatcggcaagcactgcgcgatgca 92584 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatc 187 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 61478 gtgcggcgacgtcgacatcccctaccctttcggcatc 61442 Score = 40.1 bits (20), Expect = 6.3 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 272 gaggtgaccaagatctcggtgccagacggc-aggcctggatgaa 314 ||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 49930 gaggtgaccaagatctccatggaagacggcaaggcctggatgaa 49887
>ref|NM_194572.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBb0012A20.9), mRNA Length = 2382 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||||||||||||| || | ||||||||||||||||| Sbjct: 80 ccggctgccaggcgaggtgcggcgacgtcgacattccatacccgttcggcatcggcg 136
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||||||||||||| || | ||||||||||||||||| Sbjct: 59154 ccggctgccaggcgaggtgcggcgacgtcgacattccatacccgttcggcatcggcg 59098 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||||| ||||| | || |||||||||||| Sbjct: 76204 gtgcggcgacgtcgatatcccttatccattcggcatcggc 76243
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||||||||||||| || | ||||||||||||||||| Sbjct: 778297 ccggctgccaggcgaggtgcggcgacgtcgacattccatacccgttcggcatcggcg 778241 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| |||||||||| ||| |||||||||||| Sbjct: 230355 gctgccagacaaggtgcggcgacgtggacatcccgtacccattcggcatcggc 230303 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||||| ||||| | || |||||||||||| Sbjct: 795347 gtgcggcgacgtcgatatcccttatccattcggcatcggc 795386
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||||||||||||| || | ||||||||||||||||| Sbjct: 778297 ccggctgccaggcgaggtgcggcgacgtcgacattccatacccgttcggcatcggcg 778241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||| | |||||||||||||||||| || | |||||||||||||||| Sbjct: 3106108 ccggctgccaggctaggtgcggcgacgtcgacattccctacccgttcggcatcggc 3106053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| |||||||||| ||| |||||||||||| Sbjct: 230355 gctgccagacaaggtgcggcgacgtggacatcccgtacccattcggcatcggc 230303 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 140 tgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | |||||||||| ||||||| || | |||||||||||||||| Sbjct: 3040026 tgccaggctaggtgcggcgacatcgacattccctacccgttcggcatcggc 3040076 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||| |||||| |||||| | |||||||||||||||| Sbjct: 3069697 gtgcggtgacgtcagcatcccctacccgttcggcatcggc 3069736 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||||| ||||| | || |||||||||||| Sbjct: 795347 gtgcggcgacgtcgatatcccttatccattcggcatcggc 795386
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||||||||||||| || | ||||||||||||||||| Sbjct: 778294 ccggctgccaggcgaggtgcggcgacgtcgacattccatacccgttcggcatcggcg 778238 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||| | |||||||||||||||||| || | |||||||||||||||| Sbjct: 3106029 ccggctgccaggctaggtgcggcgacgtcgacattccctacccgttcggcatcggc 3105974 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| |||||||||| ||| |||||||||||| Sbjct: 230353 gctgccagacaaggtgcggcgacgtggacatcccgtacccattcggcatcggc 230301 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 140 tgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | |||||||||| ||||||| || | |||||||||||||||| Sbjct: 3039947 tgccaggctaggtgcggcgacatcgacattccctacccgttcggcatcggc 3039997 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||| |||||| |||||| | |||||||||||||||| Sbjct: 3069618 gtgcggtgacgtcagcatcccctacccgttcggcatcggc 3069657 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||||| ||||| | || |||||||||||| Sbjct: 795344 gtgcggcgacgtcgatatcccttatccattcggcatcggc 795383
>ref|NM_194877.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBa0028C16.9), mRNA Length = 2088 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||| | |||||||||||||||||| || | |||||||||||||||| Sbjct: 83 ccggctgccaggctaggtgcggcgacgtcgacattccctacccgttcggcatcggc 138
>ref|XM_450981.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2396 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 87 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 142
>gb|AC148822.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0036K13 map near R3342S, complete sequence Length = 135684 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 28719 caagtgcggcgacgtcgacatccccttccccttcggcatcggcg 28762 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 78939 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 78982 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 72340 caagtgcggcgaggtagacatccccttccctttcggcgtcggcg 72383 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 8152 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 8195 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 54607 aagtgcggcgacgtgcgcatccccttccctttcggcatcggcg 54649 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||| |||| || ||||| | ||| ||||||||||||| Sbjct: 127748 caagtgcggcaacgtggagatcccctacccattcggcatcggcg 127791
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||| | |||||||||||||||||| || | |||||||||||||||| Sbjct: 75740 ccggctgccaggctaggtgcggcgacgtcgacattccctacccgttcggcatcggc 75685 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 140 tgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | |||||||||| ||||||| || | |||||||||||||||| Sbjct: 9658 tgccaggctaggtgcggcgacatcgacattccctacccgttcggcatcggc 9708 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||| |||||| |||||| | |||||||||||||||| Sbjct: 39329 gtgcggtgacgtcagcatcccctacccgttcggcatcggc 39368
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 27492592 caagtgcggcgacgtcgacatccccttccccttcggcatcggcg 27492635 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27741915 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 27741959 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27733387 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 27733431 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27542812 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 27542855 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27536213 caagtgcggcgaggtagacatccccttccctttcggcgtcggcg 27536256 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27472025 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 27472068 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 27518480 aagtgcggcgacgtgcgcatccccttccctttcggcatcggcg 27518522 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||| |||| || ||||| | ||| ||||||||||||| Sbjct: 27591621 caagtgcggcaacgtggagatcccctacccattcggcatcggcg 27591664
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 4896 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 4841
>dbj|AK111541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038H19, full insert sequence Length = 2604 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 133 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 188
>dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090B05, full insert sequence Length = 2453 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||| | | |||||| |||||||||||||||||||| |||||||||||||| Sbjct: 145 ggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcga 200
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 27516580 caagtgcggcgacgtcgacatccccttccccttcggcatcggcg 27516623 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27765903 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 27765947 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27757375 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 27757419 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27566800 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 27566843 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27560201 caagtgcggcgaggtagacatccccttccctttcggcgtcggcg 27560244 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||| || |||||||| ||||| |||||| |||||| Sbjct: 27496013 caagtgcggcgaggtggacatccccttccccttcggcgtcggcg 27496056 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||||||| |||||| ||||| ||||||||||||| Sbjct: 27542468 aagtgcggcgacgtgcgcatccccttccctttcggcatcggcg 27542510 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||| |||| || ||||| | ||| ||||||||||||| Sbjct: 27615609 caagtgcggcaacgtggagatcccctacccattcggcatcggcg 27615652
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 112285 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 112241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 103757 caagtgcggcgacgtcgacatccccttccccttcggcgtcggcga 103713
>gb|AF327447.1|AF327447 Oryza sativa wall-associated protein kinase mRNA, complete cds Length = 2384 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 164 caagtgcggcgacgtggacatccccttgccgttcggcatcggcga 208
>dbj|AK119296.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E06, full insert sequence Length = 2995 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 155 ggcgacgtcgacatcccgttcccgttcggcatcggcgagaagtgcgcgttgca 207 ||||||||||| |||||||||||||||||||||||| || | |||||| |||| Sbjct: 146 ggcgacgtcgagatcccgttcccgttcggcatcggcaagcactgcgcgatgca 198
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 134 cccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||| | |||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 27114 cccggctgccccgacaagtgcggcgacgtctccatcccctacccgttcggcatcggcga 27056 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||| |||||| | |||||||||| ||||||| Sbjct: 65933 caagtgcggcgacgtctccatcccctacccgttcggcgtcggcga 65889
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 134 cccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||| | |||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 24650928 cccggctgccccgacaagtgcggcgacgtctccatcccctacccgttcggcatcggcga 24650870 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||| |||||| | |||||||||| ||||||| Sbjct: 24690386 caagtgcggcgacgtctccatcccctacccgttcggcgtcggcga 24690342
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 134 cccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||| | |||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 82974 cccggctgccccgacaagtgcggcgacgtctccatcccctacccgttcggcatcggcga 82916 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||| |||||| | |||||||||| ||||||| Sbjct: 121697 caagtgcggcgacgtctccatcccctacccgttcggcgtcggcga 121653
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 134 cccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||| | |||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 24568397 cccggctgccccgacaagtgcggcgacgtctccatcccctacccgttcggcatcggcga 24568339 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||| |||||| | |||||||||| ||||||| Sbjct: 24607216 caagtgcggcgacgtctccatcccctacccgttcggcgtcggcga 24607172
>ref|NM_194500.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBa0096E22.11), mRNA Length = 615 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| |||||||||| ||| |||||||||||| Sbjct: 86 gctgccagacaaggtgcggcgacgtggacatcccgtacccattcggcatcggc 138
>gb|AC099400.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096E22, complete sequence Length = 133846 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| |||||||||| ||| |||||||||||| Sbjct: 80018 gctgccagacaaggtgcggcgacgtggacatcccgtacccattcggcatcggc 79966
>gb|AF353091.4| Oryza sativa protein kinase mRNA, complete cds Length = 2386 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 |||||||||||||||||||||||| | ||| |||||| ||||||| Sbjct: 99 caagtgcggcgacgtcgacatcccctcccctttcggcgtcggcga 143
>ref|XM_466822.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2247 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| |||||||| | |||||||||||||||| Sbjct: 102 gtgcggcgacgtggacatcccctacccgttcggcatcggc 141
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| |||||||| | |||||||||||||||| Sbjct: 24892603 gtgcggcgacgtggacatcccctacccgttcggcatcggc 24892564 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| || ||||||| |||||||||| ||||| Sbjct: 24883174 gtgcggcgacgtggagatcccgtacccgttcggcgtcggc 24883135
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| |||||||| | |||||||||||||||| Sbjct: 53886 gtgcggcgacgtggacatcccctacccgttcggcatcggc 53847 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| || ||||||| |||||||||| ||||| Sbjct: 44457 gtgcggcgacgtggagatcccgtacccgttcggcgtcggc 44418
>gb|AY946210.1| Hordeum vulgare subsp. vulgare 3' flanking sequence from Ds insertion in TNP-11 Length = 1567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||||| | |||||||| ||||| ||||||||||||| Sbjct: 1215 caagtgcggcgacatggacatccccttccccttcggcatcggcg 1172
>ref|NM_194869.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBa0031A07.17), mRNA Length = 2082 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 140 tgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | |||||||||| ||||||| || | |||||||||||||||| Sbjct: 82 tgccaggctaggtgcggcgacatcgacattccctacccgttcggcatcggc 132
>ref|XM_450729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 133 tcccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||||| || | ||| ||||| ||||| |||| ||||||||| ||||||||| | Sbjct: 558 tcccggctgcccggagaggtgtggcgatgtcgagatcctgttcccgtttggcatcggcaa 617 Query: 193 gaagtgcgcgttgca 207 | |||||||| |||| Sbjct: 618 gcagtgcgcgatgca 632
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 140 tgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | |||||||||| ||||||| || | |||||||||||||||| Sbjct: 128448 tgccaggctaggtgcggcgacatcgacattccctacccgttcggcatcggc 128498
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 133 tcccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcga 192 ||||||||||| || | ||| ||||| ||||| |||| ||||||||| ||||||||| | Sbjct: 102629 tcccggctgcccggagaggtgtggcgatgtcgagatcctgttcccgtttggcatcggcaa 102570 Query: 193 gaagtgcgcgttgca 207 | |||||||| |||| Sbjct: 102569 gcagtgcgcgatgca 102555 Score = 48.1 bits (24), Expect = 0.026 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Minus Query: 272 gaggtgaccaagatctcggtgccagacggc-aggcctggatgaa 314 ||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 114703 gaggtgaccaagatctccctggcagacggcaaggcctggatgaa 114660 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Minus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| | | ||||| || ||| || ||||| ||||||||||||||||| Sbjct: 114856 ggctgccagacgaggtgcgacgtcgtggatatcccattcccgttcggcatcgg 114804
>ref|XM_450977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2322 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatc 187 ||||||||||||||||||||| | ||| ||||||||| Sbjct: 126 gtgcggcgacgtcgacatcccctaccctttcggcatc 162
>ref|XM_471524.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||||||||| | |||||||||| Sbjct: 115 tgcggcgacgtcgacatcccttacccgttcggc 147
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||||||||| | |||||||||| Sbjct: 11627002 tgcggcgacgtcgacatcccttacccgttcggc 11626970 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||| |||||||| | |||||||||| Sbjct: 17919828 aagtgcggcgacgtagacatcccctacccgttcggc 17919793 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| |||||| ||||| | |||||||||||||||| Sbjct: 17878820 gtgcggcggcgtcgatatcccctacccgttcggcatcggc 17878781 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 gacatcccgttcccgttcggcatcg 188 |||||||| |||||||||||||||| Sbjct: 17737608 gacatccctttcccgttcggcatcg 17737584
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| ||||||| || ||| |||||||||||| Sbjct: 8280645 gctgccagacaaggtgcggcgacgtggacatcctgtacccattcggcatcggc 8280697
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| ||||||||||| || ||||||||||||||| Sbjct: 29339909 aagtgcggcaacgtcgacatcgagtacccgttcggcatcgg 29339869
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| ||||||||||| || ||||||||||||||| Sbjct: 50790 aagtgcggcaacgtcgacatcgagtacccgttcggcatcgg 50750
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| ||||||||||| || ||||||||||||||| Sbjct: 102707 aagtgcggcaacgtcgacatcgagtacccgttcggcatcgg 102667
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 138 gctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| | | |||||||||||| ||||||| || ||| |||||||||||| Sbjct: 75757 gctgccagacaaggtgcggcgacgtggacatcctgtacccattcggcatcggc 75809
>dbj|AK106614.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H08, full insert sequence Length = 2651 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||||||||| | |||||||||| Sbjct: 120 tgcggcgacgtcgacatcccttacccgttcggc 152
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||||||||| | |||||||||| Sbjct: 110012 tgcggcgacgtcgacatcccttacccgttcggc 109980
>ref|XM_450731.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 48.1 bits (24), Expect = 0.026 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 272 gaggtgaccaagatctcggtgccagacggc-aggcctggatgaa 314 ||||||||||||||||| || |||||||| ||||||||||||| Sbjct: 280 gaggtgaccaagatctccctggcagacggcaaggcctggatgaa 323 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 137 ggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcgg 189 ||||||||| | | ||||| || ||| || ||||| ||||||||||||||||| Sbjct: 127 ggctgccagacgaggtgcgacgtcgtggatatcccattcccgttcggcatcgg 179
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 157 cgacgtcgacatcccgttcccgttcggc 184 ||||||||||||||||||| |||||||| Sbjct: 2884986 cgacgtcgacatcccgttcgcgttcggc 2885013
>ref|XM_472136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2301 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||| |||||||| | |||||||||| Sbjct: 139 aagtgcggcgacgtagacatcccctacccgttcggc 174
>ref|XM_472132.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| |||||| ||||| | |||||||||||||||| Sbjct: 117 gtgcggcggcgtcgatatcccctacccgttcggcatcggc 156
>emb|AL731632.2|OSJN00275 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0042I07, complete sequence Length = 129198 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||| |||||||| | |||||||||| Sbjct: 10107 aagtgcggcgacgtagacatcccctacccgttcggc 10072
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 11071741 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 11071702
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 89567 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 89606
>dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N17, full insert sequence Length = 2516 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||||||| || ||||||| |||||||||| ||||| Sbjct: 121 gtgcggcgacgtggagatcccgtacccgttcggcgtcggc 160
>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1446H11 Length = 135488 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 42347 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 42308
>dbj|AK107014.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-F11, full insert sequence Length = 2253 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 1557 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 1518
>dbj|AK102702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103N20, full insert sequence Length = 2570 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 161 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 200
>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0560B10, complete sequence Length = 108295 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 152 tgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 ||||||||||| | | | |||||||||||||||||||||| Sbjct: 30257 tgcggcgacgtggccgtgccgttcccgttcggcatcggcg 30218
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 149 aagtgcggcgacgtcgacatcccgttcccgttcggc 184 |||||||||||||| |||||||| | |||||||||| Sbjct: 116583 aagtgcggcgacgtagacatcccctacccgttcggc 116548 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||||| |||||| ||||| | |||||||||||||||| Sbjct: 75575 gtgcggcggcgtcgatatcccctacccgttcggcatcggc 75536
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgttcccgttcggcatcggcg 191 ||||||||||||||||||||| Sbjct: 627407 cgttcccgttcggcatcggcg 627387
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgttcccgttcggcatcggcg 191 ||||||||||||||||||||| Sbjct: 3147857 cgttcccgttcggcatcggcg 3147877
>gb|AC132233.4| Mus musculus BAC clone RP24-490D10 from chromosome 5, complete sequence Length = 160438 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tgccatgttcttctctgcctt 85 ||||||||||||||||||||| Sbjct: 54089 tgccatgttcttctctgcctt 54109
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 cgttcccgttcggcatcggcg 191 ||||||||||||||||||||| Sbjct: 2877931 cgttcccgttcggcatcggcg 2877951
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 gacatcccgttcccgttcggcatcg 188 |||||||| |||||||||||||||| Sbjct: 109984 gacatccctttcccgttcggcatcg 109960
>gb|AC008456.6| Homo sapiens chromosome 5 clone CTC-348L5, complete sequence Length = 131312 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 tctcctggcagtgctataacc 346 ||||||||||||||||||||| Sbjct: 107834 tctcctggcagtgctataacc 107854
>gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, complete sequence Length = 217930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tgccatgttcttctctgcctt 85 ||||||||||||||||||||| Sbjct: 3148 tgccatgttcttctctgcctt 3128
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 cgttcccgttcggcatcggcg 191 ||||||||||||||||||||| Sbjct: 2000807 cgttcccgttcggcatcggcg 2000787
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 135 ccggctgccaggccaagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||| |||| || ||| ||||||| ||| | |||||| | ||||||||||||||||| Sbjct: 114435 ccggttgcccgggcaactgcggcggcgtgggcatcccttacccgttcggcatcggcg 114379
>ref|NM_194873.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBa0028C16.5), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 |||||| |||||| |||||| | |||||||||||||||| Sbjct: 93 gtgcggtgacgtcagcatcccctacccgttcggcatcggc 132
>ref|NM_194574.1| Oryza sativa (japonica cultivar-group) putative wall-associated protein kinase (OSJNBb0012A20.11), mRNA Length = 954 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 151 gtgcggcgacgtcgacatcccgttcccgttcggcatcggc 190 ||||||||||||||| ||||| | || |||||||||||| Sbjct: 90 gtgcggcgacgtcgatatcccttatccattcggcatcggc 129
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 caaggtctttgtcatcggtg 456 |||||||||||||||||||| Sbjct: 288823 caaggtctttgtcatcggtg 288804
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 148 caagtgcggcgacgtcgacatcccgttcccgttcggcatcggcg 191 |||||||||| |||| || ||||| | ||| ||||||||||||| Sbjct: 130352 caagtgcggcaacgtggagatcccctacccattcggcatcggcg 130309
>ref|XM_572466.1| Cryptococcus neoformans var. neoformans JEC21 L-arabinitol 4-dehydrogenase (CNH02960) partial mRNA Length = 1353 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 caaggtctttgtcatcggtg 456 |||||||||||||||||||| Sbjct: 924 caaggtctttgtcatcggtg 943
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgttcggcatcggcgagaag 196 |||||||||||||||||||| Sbjct: 3360876 cgttcggcatcggcgagaag 3360857
>gb|AC133618.3| Rattus norvegicus 18 BAC CH230-71N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 234684 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ccttttaaaaggaattttga 273 |||||||||||||||||||| Sbjct: 149065 ccttttaaaaggaattttga 149084
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgttcggcatcggcgagaag 196 |||||||||||||||||||| Sbjct: 23871 cgttcggcatcggcgagaag 23852
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 gtgttctcggtttcttctgt 62 |||||||||||||||||||| Sbjct: 151736 gtgttctcggtttcttctgt 151717
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 cgttcggcatcggcgagaagtgcg 200 ||||||||||| |||||||||||| Sbjct: 2884418 cgttcggcatctgcgagaagtgcg 2884395
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tcccgttcggcatcggcgag 193 |||||||||||||||||||| Sbjct: 1999939 tcccgttcggcatcggcgag 1999958
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggccgatgtgccggtagccc 128 |||||||||||||||||||| Sbjct: 241135 ggccgatgtgccggtagccc 241154
>gb|U31284.1|MCU31284 Mesotaenium caldariorum clone mesphy1b phytochrome gene, complete cds Length = 10878 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gcgagaagtgcgcgttgcac 208 |||||||||||||||||||| Sbjct: 2160 gcgagaagtgcgcgttgcac 2179
>gb|U67060.1|CGU67060 Cricetulus griseus SREBP cleavage activating protein (SCAP) mRNA, complete cds Length = 4119 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gctgccaggccaagtgcggc 157 |||||||||||||||||||| Sbjct: 2272 gctgccaggccaagtgcggc 2253 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,089,736 Number of Sequences: 3902068 Number of extensions: 3089736 Number of successful extensions: 61108 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60137 Number of HSP's gapped (non-prelim): 971 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
