ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 8e-58
2dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine d... 232 8e-58
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
4dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
5gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence 188 1e-44
6gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-... 188 1e-44
7gb|AY111528.1| Zea mays CL2353_1 mRNA sequence 111 2e-21
8gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-h... 111 2e-21
9ref|XM_481776.1| Oryza sativa (japonica cultivar-group), mRNA 90 7e-15
10ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA 90 7e-15
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
12dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
13dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
14dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 44 0.38
15gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP ... 42 1.5
16gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP ... 42 1.5
17gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP ... 42 1.5
18gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP ... 42 1.5
19gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP ... 42 1.5
20gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 40 5.9
21gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p... 40 5.9
22gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, comple... 40 5.9
23emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chro... 40 5.9
24gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete se... 40 5.9
25gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA ... 40 5.9
26gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419... 40 5.9
27gb|AY555583.1| Pediculus humanus glutamyl aminopeptidase (APA1) ... 40 5.9
28dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.9
29emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 5.9
30dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 5.9
31dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 5.9 
>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full
           insert sequence
          Length = 3120

 Score =  232 bits (117), Expect = 8e-58
 Identities = 185/207 (89%), Gaps = 3/207 (1%)
 Strand = Plus / Plus

                                                                       
Query: 233 tttgccaagacatggttctaagaatctgctcacaccagctgctgcagccgtttcagttga 292
           ||||| |||||||||||| | |||| ||||| ||   |||||||| ||  ||||| ||||
Sbjct: 253 tttgcaaagacatggttccaggaatttgctcgca---gctgctgcggctatttcaattga 309

                                                                       
Query: 293 acaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcgg 352
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 310 acaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttgg 369

                                                                       
Query: 353 tggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtga 412
           |||||| || ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 370 tggcacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtga 429

                                      
Query: 413 ctcttccgagaggaagctgataattgt 439
           |||||| |||||||||||||| |||||
Sbjct: 430 ctcttctgagaggaagctgatcattgt 456



 Score =  133 bits (67), Expect = 5e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 73  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 132
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 81  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 140

                                                                       
Query: 133 ggctccggccgtccgcctccggtagggaagtaatttcacaatgtttgaagtgtgagataa 192
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 141 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 200

                              
Query: 193 atcaggaccgacctttggg 211
           ||||||||| |||||||||
Sbjct: 201 atcaggaccaacctttggg 219
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>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete
           cds
          Length = 3061

 Score =  232 bits (117), Expect = 8e-58
 Identities = 185/207 (89%), Gaps = 3/207 (1%)
 Strand = Plus / Plus

                                                                       
Query: 233 tttgccaagacatggttctaagaatctgctcacaccagctgctgcagccgtttcagttga 292
           ||||| |||||||||||| | |||| ||||| ||   |||||||| ||  ||||| ||||
Sbjct: 220 tttgcaaagacatggttccaggaatttgctcgca---gctgctgcggctatttcaattga 276

                                                                       
Query: 293 acaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgcacaagttcgg 352
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 277 acaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttgg 336

                                                                       
Query: 353 tggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtagttcttggtga 412
           |||||| || ||||||||||| |||||||||||||||||||||||| | |||||||||||
Sbjct: 337 tggcacctgtatgggaacaccccagagaattcagaatgttgctgatattgttcttggtga 396

                                      
Query: 413 ctcttccgagaggaagctgataattgt 439
           |||||| |||||||||||||| |||||
Sbjct: 397 ctcttctgagaggaagctgatcattgt 423



 Score =  133 bits (67), Expect = 5e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 73  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 132
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 48  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 107

                                                                       
Query: 133 ggctccggccgtccgcctccggtagggaagtaatttcacaatgtttgaagtgtgagataa 192
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 108 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 167

                              
Query: 193 atcaggaccgacctttggg 211
           ||||||||| |||||||||
Sbjct: 168 atcaggaccaacctttggg 186
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  224 bits (113), Expect = 2e-55
 Identities = 146/157 (92%)
 Strand = Plus / Minus

                                                                           
Query: 283     tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 342
               ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6953046 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 6952987

                                                                           
Query: 343     acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 402
               ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 6952986 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 6952927

                                                    
Query: 403     ttcttggtgactcttccgagaggaagctgataattgt 439
               |||||||||||||||| |||||||||||||| |||||
Sbjct: 6952926 ttcttggtgactcttctgagaggaagctgatcattgt 6952890



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                       
Query: 156     agggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 211
               |||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 6954191 agggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 6954136



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                
Query: 73      gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 121
               |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 6955210 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 6955162
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score =  224 bits (113), Expect = 2e-55
 Identities = 146/157 (92%)
 Strand = Plus / Minus

                                                                         
Query: 283   tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggtctgtgc 342
             ||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 24217 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 24158

                                                                         
Query: 343   acaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctgatgtag 402
             ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||| | |
Sbjct: 24157 acaagtttggtggcacctgtatgggaacaccccagagaattcagaatgttgctgatattg 24098

                                                  
Query: 403   ttcttggtgactcttccgagaggaagctgataattgt 439
             |||||||||||||||| |||||||||||||| |||||
Sbjct: 24097 ttcttggtgactcttctgagaggaagctgatcattgt 24061



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                     
Query: 156   agggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 211
             |||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 25362 agggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 25307



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 73    gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 121
             |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 26381 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 26333
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>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence
          Length = 3045

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/179 (88%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtacttatcttcca 320
           |||| |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||
Sbjct: 242 ctcagaccagctgctgcagctatttcagttgaacaagatgaagtcaatacttatcttcca 301

                                                                       
Query: 321 aaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacctcagaga 380
           ||||||||||||||||||||||||||||||||||| || || |||||||| ||  | |||
Sbjct: 302 aaaggtgatatgtggtctgtgcacaagttcggtggaacctgtatgggaactcccaaaaga 361

                                                                      
Query: 381 attcagaatgttgctgatgtagttcttggtgactcttccgagaggaagctgataattgt 439
           || |||  ||||||  || ||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 362 atccagtgtgttgcaaatatagttcttggtgattcttctgagaggaagctgatcattgt 420
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>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3045

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/179 (88%)
 Strand = Plus / Plus

                                                                       
Query: 261 ctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtacttatcttcca 320
           |||| |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||
Sbjct: 242 ctcagaccagctgctgcagctatttcagttgaacaagatgaagtcaatacttatcttcca 301

                                                                       
Query: 321 aaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaacacctcagaga 380
           ||||||||||||||||||||||||||||||||||| || || |||||||| ||  | |||
Sbjct: 302 aaaggtgatatgtggtctgtgcacaagttcggtggaacctgtatgggaactcccaaaaga 361

                                                                      
Query: 381 attcagaatgttgctgatgtagttcttggtgactcttccgagaggaagctgataattgt 439
           || |||  ||||||  || ||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 362 atccagtgtgttgcaaatatagttcttggtgattcttctgagaggaagctgatcattgt 420
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>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence
          Length = 3153

 Score =  111 bits (56), Expect = 2e-21
 Identities = 146/176 (82%)
 Strand = Plus / Plus

                                                                       
Query: 252 aagaatctgctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtact 311
           |||||| ||||| ||||| ||||||  || ||||||||||| |||| |||||  | | ||
Sbjct: 240 aagaatttgctcgcaccaactgctggtgctgtttcagttgagcaagctgaagctattgct 299

                                                                       
Query: 312 tatcttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaaca 371
            | || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| || 
Sbjct: 300 gacctcccaaaaggtgacatgtggtcggtgcacaagtttggtggcacatgcatggggacc 359

                                                                   
Query: 372 cctcagagaattcagaatgttgctgatgtagttcttggtgactcttccgagaggaa 427
            || |||||||||| |||||||||||| |||| ||| ||||  |||| ||||||||
Sbjct: 360 tctgagagaattcacaatgttgctgatatagtccttcgtgatccttctgagaggaa 415
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>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3178

 Score =  111 bits (56), Expect = 2e-21
 Identities = 146/176 (82%)
 Strand = Plus / Plus

                                                                       
Query: 252 aagaatctgctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtact 311
           |||||| ||||| ||||| ||||||  || ||||||||||| |||| |||||  | | ||
Sbjct: 240 aagaatttgctcgcaccaactgctggtgctgtttcagttgagcaagctgaagctattgct 299

                                                                       
Query: 312 tatcttccaaaaggtgatatgtggtctgtgcacaagttcggtggcacttgcatgggaaca 371
            | || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| || 
Sbjct: 300 gacctcccaaaaggtgacatgtggtcggtgcacaagtttggtggcacatgcatggggacc 359

                                                                   
Query: 372 cctcagagaattcagaatgttgctgatgtagttcttggtgactcttccgagaggaa 427
            || |||||||||| |||||||||||| |||| ||| ||||  |||| ||||||||
Sbjct: 360 tctgagagaattcacaatgttgctgatatagtccttcgtgatccttctgagaggaa 415
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>ref|XM_481776.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2727

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 273 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 332
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 273 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 332

                                                                       
Query: 333 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 392
           ||||||||||| || || ||||| || |||||||||||  | ||||| ||||||||||| 
Sbjct: 333 tggtctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtg 392

                
Query: 393 gctga 397
           |||||
Sbjct: 393 gctga 397



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  ggagcctcgccgtcgcgagccc 103
           ||||||||||||||||||||||
Sbjct: 55  ggagcctcgccgtcgcgagccc 76
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>ref|XM_481775.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2766

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 273 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 332
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 223 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 282

                                                                       
Query: 333 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 392
           ||||||||||| || || ||||| || |||||||||||  | ||||| ||||||||||| 
Sbjct: 283 tggtctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtg 342

                
Query: 393 gctga 397
           |||||
Sbjct: 343 gctga 347



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  ggagcctcgccgtcgcgagccc 103
           ||||||||||||||||||||||
Sbjct: 5   ggagcctcgccgtcgcgagccc 26
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                            
Query: 277      cagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggt 336
                |||| ||||||||||| |||| |||||  ||| || | |||||||||||||| |||||||
Sbjct: 15441961 cagctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggt 15441902

                                                                            
Query: 337      ctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctg 396
                ||||||| || || ||||| || |||||||||||  | ||||| ||||||||||| ||||
Sbjct: 15441901 ctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctg 15441842

                 
Query: 397      a 397
                |
Sbjct: 15441841 a 15441841



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 82       ggagcctcgccgtcgcgagccc 103
                ||||||||||||||||||||||
Sbjct: 15443315 ggagcctcgccgtcgcgagccc 15443294
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1790_D02
          Length = 162928

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                          
Query: 277    cagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggt 336
              |||| ||||||||||| |||| |||||  ||| || | |||||||||||||| |||||||
Sbjct: 127537 cagctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggt 127478

                                                                          
Query: 337    ctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgttgctg 396
              ||||||| || || ||||| || |||||||||||  | ||||| ||||||||||| ||||
Sbjct: 127477 ctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtggctg 127418

               
Query: 397    a 397
              |
Sbjct: 127417 a 127417



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 82     ggagcctcgccgtcgcgagccc 103
              ||||||||||||||||||||||
Sbjct: 128891 ggagcctcgccgtcgcgagccc 128870
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>dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075O09, full
           insert sequence
          Length = 2726

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 273 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 332
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 272 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 331

                                                                       
Query: 333 tggtctgtgcacaagttcggtggcacttgcatgggaacacctcagagaattcagaatgtt 392
           ||||||||||| || || ||||| || |||||||||||  | ||||| ||||||||||| 
Sbjct: 332 tggtctgtgcataaatttggtgggacctgcatgggaacctcccagaggattcagaatgtg 391

                
Query: 393 gctga 397
           |||||
Sbjct: 392 gctga 396



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  ggagcctcgccgtcgcgagccc 103
           ||||||||||||||||||||||
Sbjct: 54  ggagcctcgccgtcgcgagccc 75
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 349    tcggtggcacttgcatgggaacacctcaga 378
              ||||||||||| ||||||||| ||||||||
Sbjct: 361609 tcggtggcactggcatgggaatacctcaga 361638
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>gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1070

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ccccgtcccgacagccgccgc 121
           |||||||||||||||||||||
Sbjct: 662 ccccgtcccgacagccgccgc 682
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>gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ccccgtcccgacagccgccgc 121
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ccccgtcccgacagccgccgc 121
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ccccgtcccgacagccgccgc 121
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ccccgtcccgacagccgccgc 121
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   aagtaatttcacaatgtttg 179
             ||||||||||||||||||||
Sbjct: 91169 aagtaatttcacaatgtttg 91150
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>gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p11.4, complete sequence
          Length = 170219

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aagtaatttcacaatgtttg 179
              ||||||||||||||||||||
Sbjct: 149534 aagtaatttcacaatgtttg 149515
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>gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, complete sequence
          Length = 103354

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  aggaggaaatttgccaagac 243
            ||||||||||||||||||||
Sbjct: 6406 aggaggaaatttgccaagac 6387
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>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part
             of the GPC6 gene for glypican 6 and the 3' end of a novel
             gene, complete sequence
          Length = 150021

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gtttgaagtgtgagataaat 194
             ||||||||||||||||||||
Sbjct: 55476 gtttgaagtgtgagataaat 55495
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>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
          Length = 119559

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 255   aatctgctcacaccagctgctgca 278
             ||||||||||||||| ||||||||
Sbjct: 32456 aatctgctcacaccatctgctgca 32479
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>gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA gene, partial
           sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 atcgacggaggctccggccg 143
           ||||||||||||||||||||
Sbjct: 147 atcgacggaggctccggccg 166
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>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence
          Length = 175742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   gtaatttcacaatgtttgaagtgt 185
             ||||||||||||||||| ||||||
Sbjct: 56356 gtaatttcacaatgtttcaagtgt 56333
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>gb|AY555583.1| Pediculus humanus glutamyl aminopeptidase (APA1) mRNA, complete cds
          Length = 2901

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 cagctgctgcagccgtttca 287
           ||||||||||||||||||||
Sbjct: 880 cagctgctgcagccgtttca 899
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>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1
          Length = 187189

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 162   gtaatttcacaatgtttgaagtgt 185
             ||||||||||||||||| ||||||
Sbjct: 39345 gtaatttcacaatgtttcaagtgt 39368
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
             sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   agaatctgctcacaccagct 272
             ||||||||||||||||||||
Sbjct: 81779 agaatctgctcacaccagct 81760
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    aagtcagtacttatcttccaaaag 324
              |||||||| |||||||||||||||
Sbjct: 209001 aagtcagttcttatcttccaaaag 208978



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    aagtcagtacttatcttccaaaag 324
              |||||||| |||||||||||||||
Sbjct: 132203 aagtcagttcttatcttccaaaag 132226
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    aagtcagtacttatcttccaaaag 324
              |||||||| |||||||||||||||
Sbjct: 500349 aagtcagttcttatcttccaaaag 500372



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    aagtcagtacttatcttccaaaag 324
              |||||||| |||||||||||||||
Sbjct: 326840 aagtcagttcttatcttccaaaag 326863



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 301    aagtcagtacttatcttccaaaag 324
              |||||||| |||||||||||||||
Sbjct: 134324 aagtcagttcttatcttccaaaag 134347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,999,329
Number of Sequences: 3902068
Number of extensions: 2999329
Number of successful extensions: 57956
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57855
Number of HSP's gapped (non-prelim): 97
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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