Clone Name | bastl38c01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full insert sequence Length = 2639 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 298 cctcctctcgcccaagggcgtaaactatgaagtgcaagctctcatgatgatcaagaacta 357 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 193 cctcctctctcccaagggtgtaaactatgaagtgcaagctctcatgatgatcaagacttc 252 Query: 358 cctcaaggatccccatggcgtgctcaagaactgggaccaggactccgtcgatccctgcag 417 |||||||||||| || || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 253 cctcaaggatcctcacggtgtgctcaagaactgggaccaagactccgtggatccttgcag 312 Query: 418 ctggaccatggtcacctgctcac 440 ||||||||||||||| ||||||| Sbjct: 313 ctggaccatggtcacttgctcac 335
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 145 bits (73), Expect = 1e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 328 agtgcaagctctcatgatgatcaagaactacctcaaggatccccatggcgtgctcaagaa 387 |||||||||||||||||||||||||| | |||||||||||| || || ||||||||||| Sbjct: 30337901 agtgcaagctctcatgatgatcaagacttccctcaaggatcctcacggtgtgctcaagaa 30337842 Query: 388 ctgggaccaggactccgtcgatccctgcagctggaccatggtcacctgctcac 440 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 30337841 ctgggaccaagactccgtggatccttgcagctggaccatggtcacttgctcac 30337789 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 cctcctctcgcccaagggcgtaaactatgaag 329 ||||||||| |||||||| ||||||||||||| Sbjct: 30338107 cctcctctctcccaagggtgtaaactatgaag 30338076 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 atcttcctttgtgtcatttgccactgaca 29 |||||| |||||||||||||| ||||||| Sbjct: 30338347 atcttcttttgtgtcatttgctactgaca 30338319
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 145 bits (73), Expect = 1e-31 Identities = 103/113 (91%) Strand = Plus / Minus Query: 328 agtgcaagctctcatgatgatcaagaactacctcaaggatccccatggcgtgctcaagaa 387 |||||||||||||||||||||||||| | |||||||||||| || || ||||||||||| Sbjct: 18761 agtgcaagctctcatgatgatcaagacttccctcaaggatcctcacggtgtgctcaagaa 18702 Query: 388 ctgggaccaggactccgtcgatccctgcagctggaccatggtcacctgctcac 440 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 18701 ctgggaccaagactccgtggatccttgcagctggaccatggtcacttgctcac 18649 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 cctcctctcgcccaagggcgtaaactatgaag 329 ||||||||| |||||||| ||||||||||||| Sbjct: 18967 cctcctctctcccaagggtgtaaactatgaag 18936 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 atcttcctttgtgtcatttgccactgaca 29 |||||| |||||||||||||| ||||||| Sbjct: 19207 atcttcttttgtgtcatttgctactgaca 19179
>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full insert sequence Length = 2500 Score = 137 bits (69), Expect = 4e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 298 cctcctctcgcccaagggcgtaaactatgaagtgcaagctctcatgatgatcaagaacta 357 ||||||||| |||||||||| || | |||||||||||||| || ||||||||||| Sbjct: 234 cctcctctccgccaagggcgtctacaacgaagtgcaagctctgattgtgatcaagaacct 293 Query: 358 cctcaaggatccccatggcgtgctcaagaactgggaccaggactccgtcgatccctgcag 417 |||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||||| Sbjct: 294 gctcaaggacccccatggcgtgctcaagagctgggaccagaactccgtcgacccctgcag 353 Query: 418 ctggaccatggtcacctgctc 438 |||| ||||| |||||||||| Sbjct: 354 ctgggccatgatcacctgctc 374
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 328 agtgcaagctctcatgatgatcaagaactacctcaaggatccccatggcgtgctcaagaa 387 |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 9327172 agtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagag 9327231 Query: 388 ctgggaccaggactccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||| |||||||||| |||||||||||| ||||| |||||||||| Sbjct: 9327232 ctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctc 9327282 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 346 gatcaagaactacctcaaggatccccatggcgtgctcaagaactgggaccaggactccgt 405 |||||||||| ||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 9300356 gatcaagaacctgctcgaggacccccatggcgtgctcaagagctgggatcagaactccgt 9300415 Query: 406 cgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||| || || |||||||||| Sbjct: 9300416 cgatccctgcagctgggccttgatcacctgctc 9300448
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 328 agtgcaagctctcatgatgatcaagaactacctcaaggatccccatggcgtgctcaagaa 387 |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 94513 agtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagag 94572 Query: 388 ctgggaccaggactccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||| |||||||||| |||||||||||| ||||| |||||||||| Sbjct: 94573 ctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctc 94623 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 346 gatcaagaactacctcaaggatccccatggcgtgctcaagaactgggaccaggactccgt 405 |||||||||| ||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 67697 gatcaagaacctgctcgaggacccccatggcgtgctcaagagctgggatcagaactccgt 67756 Query: 406 cgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||| || || |||||||||| Sbjct: 67757 cgatccctgcagctgggccttgatcacctgctc 67789
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 328 agtgcaagctctcatgatgatcaagaactacctcaaggatccccatggcgtgctcaagaa 387 |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 55582 agtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagag 55641 Query: 388 ctgggaccaggactccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||| |||||||||| |||||||||||| ||||| |||||||||| Sbjct: 55642 ctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctc 55692 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 346 gatcaagaactacctcaaggatccccatggcgtgctcaagaactgggaccaggactccgt 405 |||||||||| ||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 28766 gatcaagaacctgctcgaggacccccatggcgtgctcaagagctgggatcagaactccgt 28825 Query: 406 cgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||| || || |||||||||| Sbjct: 28826 cgatccctgcagctgggccttgatcacctgctc 28858
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Minus Query: 358 cctcaaggatccccatggcgtgctcaagaactgggaccaggactccgtcgatccctgcag 417 |||||||||||| || || |||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 138788 cctcaaggatcctcacggtgtgctcaagaactgggaccaagactccgtggatccttgcag 138729 Query: 418 ctggaccatggtcacctgctcac 440 ||||||||||||||| ||||||| Sbjct: 138728 ctggaccatggtcacttgctcac 138706
>ref|NM_185784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 346 gatcaagaactacctcaaggatccccatggcgtgctcaagaactgggaccaggactccgt 405 |||||||||| ||| |||| ||||||||||||||||||| |||||| ||| ||||||| Sbjct: 144 gatcaagaacctgctcgaggacccccatggcgtgctcaagagctgggatcagaactccgt 203 Query: 406 cgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||| || || |||||||||| Sbjct: 204 cgatccctgcagctgggccttgatcacctgctc 236
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 261 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 320 Query: 434 tgctc 438 ||||| Sbjct: 321 tgctc 325
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 167 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 226 Query: 434 tgctc 438 ||||| Sbjct: 227 tgctc 231
>gb|AY020309.1| Oryza sativa microsatellite MRG2634 containing (GA)X13, genomic sequence Length = 226 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 225 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 166 Query: 434 tgctc 438 ||||| Sbjct: 165 tgctc 161
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 21576016 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 21575957 Query: 434 tgctc 438 ||||| Sbjct: 21575956 tgctc 21575952
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 36190 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 36131 Query: 434 tgctc 438 ||||| Sbjct: 36130 tgctc 36126
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 167 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 226 Query: 434 tgctc 438 ||||| Sbjct: 227 tgctc 231
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 374 ggcgtgctcaagaactgggaccaggactccgtcgatccctgcagctggaccatggtcacc 433 |||||||| || ||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 261 ggcgtgctgaacaactgggacgaggactccgtcgacccctgcagctgggccatggtcacc 320 Query: 434 tgctc 438 ||||| Sbjct: 321 tgctc 325
>ref|XM_550278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2421 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 431 actccgtcgatccctgcagctggaggatggtcacctgctc 470
>ref|XM_550279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1905 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 208 actccgtcgatccctgcagctggaggatggtcacctgctc 247
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 3671233 actccgtcgatccctgcagctggaggatggtcacctgctc 3671194
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 79713 actccgtcgatccctgcagctggaggatggtcacctgctc 79674
>dbj|AK100017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013144J12, full insert sequence Length = 2421 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 431 actccgtcgatccctgcagctggaggatggtcacctgctc 470
>dbj|AK060282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-B07, full insert sequence Length = 1905 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||||||||||||||||| |||||||||||||| Sbjct: 208 actccgtcgatccctgcagctggaggatggtcacctgctc 247
>emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11, allele 1 Length = 5290 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 |||||||||| ||||||| |||| |||||||||||||||| Sbjct: 284 actccgtcgacccctgcacctggtccatggtcacctgctc 323
>emb|AJ841698.1| Poa pratensis serk1 gene for somatic embryogenesis receptor-like kinase 1, exons 1-11, allele 1 Length = 5188 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 399 actccgtcgatccctgcagctggaccatggtcacctgctc 438 ||||||| || ||||||| |||| |||||||||||||||| Sbjct: 286 actccgtggacccctgcacctggtccatggtcacctgctc 325
>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence Length = 232830 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccctct 276 ||||||||||||||||||||||| Sbjct: 143445 cttctcttcttctccttccctct 143467
>gb|AC099735.47| Mus musculus chromosome 1, clone RP23-218I9, complete sequence Length = 207768 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccctct 276 ||||||||||||||||||||||| Sbjct: 13100 cttctcttcttctccttccctct 13122
>gb|AC105195.5| Homo sapiens chromosome 8, clone RP11-480J6, complete sequence Length = 167834 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 247 gctgctgcttctcttcttctcct 269 ||||||||||||||||||||||| Sbjct: 123913 gctgctgcttctcttcttctcct 123935
>gb|AC104980.5| Homo sapiens chromosome 8, clone RP11-281D17, complete sequence Length = 187226 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 247 gctgctgcttctcttcttctcct 269 ||||||||||||||||||||||| Sbjct: 173584 gctgctgcttctcttcttctcct 173562
>dbj|AP004290.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB261B8 Length = 113201 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 247 gctgctgcttctcttcttctcct 269 ||||||||||||||||||||||| Sbjct: 119 gctgctgcttctcttcttctcct 141
>dbj|AP004709.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1091F7, complete sequence Length = 81376 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 247 gctgctgcttctcttcttctcct 269 ||||||||||||||||||||||| Sbjct: 59110 gctgctgcttctcttcttctcct 59132
>gb|AF048728.1| Homo sapiens minisatellite ms31 repeat region Length = 26857 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttcttct 266 |||||||||||||||||||||| Sbjct: 21757 ctgctgctgcttctcttcttct 21736
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttcttct 266 |||||||||||||||||||||| Sbjct: 121682 ctgctgctgcttctcttcttct 121661
>emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in linkage group 2, complete sequence Length = 177223 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 244 cctgctgctgcttctcttcttc 265 |||||||||||||||||||||| Sbjct: 21865 cctgctgctgcttctcttcttc 21844
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccctc 275 |||||||||||||||||||||| Sbjct: 75884 cttctcttcttctccttccctc 75905
>gb|AC092819.2| Homo sapiens chromosome 8, clone RP11-716D16, complete sequence Length = 153310 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 ctgcttctcttcttctccttccctct 276 |||||||||||||| ||||||||||| Sbjct: 57847 ctgcttctcttcttttccttccctct 57872
>gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-301H20, complete sequence Length = 213462 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 tgctgctgcttctcttcttctccttc 271 ||||||||||||||||||||| |||| Sbjct: 93039 tgctgctgcttctcttcttcttcttc 93064
>gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromosome unknown, complete sequence Length = 152653 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 tctcttcttctccttccctctc 277 |||||||||||||||||||||| Sbjct: 22055 tctcttcttctccttccctctc 22076 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 tctcttcttctccttccctctc 277 |||||||||||||||||||||| Sbjct: 22035 tctcttcttctccttccctctc 22056
>emb|BX510319.11| Zebrafish DNA sequence from clone CH211-221E5 in linkage group 8, complete sequence Length = 113234 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 tctcttcttctccttccctctc 277 |||||||||||||||||||||| Sbjct: 87029 tctcttcttctccttccctctc 87050
>ref|XM_473494.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1482 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttcttctccttccc 273 ||||| |||||||||| |||||||||||| Sbjct: 1137 ctgcttctgcttctctgcttctccttccc 1109
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 24465 ctgcttctcttcttctccttc 24445
>gb|AC134044.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019D06 map S10616A, complete sequence Length = 182486 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 180429 ctgcttctcttcttctccttc 180409
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 gcgccggcgccggccaccggc 298 ||||||||||||||||||||| Sbjct: 54851 gcgccggcgccggccaccggc 54831
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ctcttcttctccttccctctc 277 ||||||||||||||||||||| Sbjct: 28174182 ctcttcttctccttccctctc 28174202 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 gcgccggcgccggccaccggc 298 ||||||||||||||||||||| Sbjct: 16529481 gcgccggcgccggccaccggc 16529501
>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence Length = 174536 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 ccctgcccactgcccactgcc 90 ||||||||||||||||||||| Sbjct: 127958 ccctgcccactgcccactgcc 127978
>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence Length = 82435 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 gctgctgcttctcttcttctccttc 271 ||||| ||||||||||||||||||| Sbjct: 61166 gctgcagcttctcttcttctccttc 61142
>gb|BC041754.1| Xenopus laevis Fibrinogen, A alpha polypeptide, mRNA (cDNA clone MGC:53620 IMAGE:4724716), complete cds Length = 2437 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ggtgcttcccctgctgctgct 255 ||||||||||||||||||||| Sbjct: 1430 ggtgcttcccctgctgctgct 1410
>emb|CR936925.7| Mouse DNA sequence from clone DN-490M13 on chromosome 11, complete sequence Length = 40913 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 28514 ctgcttctcttcttctccttc 28534
>emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chromosome 1 Contains the 5' end of the CLSTN1 gene for calsyntenin 1, the CTNNBIP1 gene for catenin, beta interacting protein 1, two novel genes, the LZIC gene for leucine zipper and CTNNBIP1 domain containing, the 5' end of the NMNAT1 gene for nicotinamide nucleotide adenylyltransferase 1 and a CpG island, complete sequence Length = 177470 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 ctgcccactgcccactgccaa 92 ||||||||||||||||||||| Sbjct: 79469 ctgcccactgcccactgccaa 79489
>emb|AL159978.14| Human DNA sequence from clone RP11-496O3 on chromosome 13 Contains the 3' end of the WASF3 gene for WAS protein family, member 3 (WASP family Verprolin-homologous protein 3 (SCAR3, Scar3, WAVE3, KIAA0900)), the GPR12 gene for G protein-coupled receptor 12 (GPCR21) and two CpG islands, complete sequence Length = 206442 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tccctgcccactgcccactgc 89 ||||||||||||||||||||| Sbjct: 125002 tccctgcccactgcccactgc 125022
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 gcttcccctgctgctgcttct 258 ||||||||||||||||||||| Sbjct: 2546424 gcttcccctgctgctgcttct 2546444
>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete sequence Length = 219717 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 gctgctgcttctcttcttctccttc 271 ||||| ||||||||||||||||||| Sbjct: 109559 gctgcagcttctcttcttctccttc 109535
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 210339 ctgcttctcttcttctccttc 210359
>emb|AL662903.10| Mouse DNA sequence from clone RP23-419P16 on chromosome 11 Contain the gene for olfactory receptor MOR278-1, an olfactory receptor pseudogene, three novel genes, the gene for olfactory receptor MOR222-2, an olfactory receptor pseudogene (MOR222-4P), the gene for olfactory receptor MOR222-1, part of a novel gene, a novel gene (2810021J22Rik) and a novel zinc finger gene, complete sequence Length = 146349 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 ctgctgctgcttctcttcttctcct 269 |||||||||||||| |||||||||| Sbjct: 18634 ctgctgctgcttcttttcttctcct 18658
>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence Length = 159617 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccct 274 ||||||||||||||||||||| Sbjct: 137834 cttctcttcttctccttccct 137854
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 245 ctgctgctgcttctcttcttctcct 269 ||||||||||||||||||| ||||| Sbjct: 119695 ctgctgctgcttctcttctcctcct 119719
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ctcttcttctccttccctctc 277 ||||||||||||||||||||| Sbjct: 25323 ctcttcttctccttccctctc 25343
>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence Length = 180876 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 ccctgcccactgcccactgcc 90 ||||||||||||||||||||| Sbjct: 114863 ccctgcccactgcccactgcc 114843
>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence Length = 161791 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 245 ctgctgctgcttct-cttcttctccttcc 272 |||||||||||||| |||||||||||||| Sbjct: 115717 ctgctgctgcttcttcttcttctccttcc 115745
>gb|AC154198.3| Mus musculus BAC clone RP24-393P24 from chromosome 13, complete sequence Length = 142792 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 ccctgcccactgcccactgcc 90 ||||||||||||||||||||| Sbjct: 84970 ccctgcccactgcccactgcc 84990
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 gcgccggcgccggccaccggc 298 ||||||||||||||||||||| Sbjct: 124562 gcgccggcgccggccaccggc 124542
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 4052803 ctgcttctcttcttctccttc 4052783
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ctcttcttctccttccctctc 277 ||||||||||||||||||||| Sbjct: 28265506 ctcttcttctccttccctctc 28265526 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 gcgccggcgccggccaccggc 298 ||||||||||||||||||||| Sbjct: 16523115 gcgccggcgccggccaccggc 16523135
>gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosome 12, complete sequence Length = 220385 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 245 ctgctgctgcttct-cttcttctccttcc 272 |||||||||||||| |||||||||||||| Sbjct: 195690 ctgctgctgcttcttcttcttctccttcc 195662
>dbj|AK067397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105G06, full insert sequence Length = 2014 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttcttctccttccc 273 ||||| |||||||||| |||||||||||| Sbjct: 1342 ctgcttctgcttctctgcttctccttccc 1314
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttcttctcct 269 ||||||||||||||||||| ||||| Sbjct: 166868 ctgctgctgcttctcttctcctcct 166844
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctccttc 271 ||||||||||||||||||||| Sbjct: 4061497 ctgcttctcttcttctccttc 4061477
>emb|AL845309.2| Mouse DNA sequence from clone RP23-376O20 on chromosome 2, complete sequence Length = 194490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 ctgctgctgcttctcttcttc 265 ||||||||||||||||||||| Sbjct: 25835 ctgctgctgcttctcttcttc 25855
>ref|NM_106571.3| Arabidopsis thaliana unknown protein AT1G79200 mRNA, complete cds Length = 825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctcctt 270 |||||||||||||||||||| Sbjct: 57 ctgcttctcttcttctcctt 38
>gb|AC165304.8| Mus musculus chromosome 1, clone RP23-138D5, complete sequence Length = 204924 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cttctcttcttctccttccctctc 277 ||||||||||||||||| |||||| Sbjct: 203824 cttctcttcttctcctttcctctc 203801
>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence Length = 183087 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ctccctgcccactgcccact 87 |||||||||||||||||||| Sbjct: 91413 ctccctgcccactgcccact 91432
>ref|XM_531492.1| PREDICTED: Pan troglodytes LOC474040 (LOC474040), mRNA Length = 1181 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cccactgcccactgccaact 94 |||||||||||||||||||| Sbjct: 1037 cccactgcccactgccaact 1056
>gb|AC171105.1| Drosophila melanogaster clone CH223-40I08, complete sequence Length = 53089 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ctgcccactgcccactgcca 91 |||||||||||||||||||| Sbjct: 41994 ctgcccactgcccactgcca 42013
>ref|XM_476550.1| Oryza sativa (japonica cultivar-group), mRNA Length = 879 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 587 tcttcttctccttccctctc 568
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tgctgctgcttctcttcttctcct 269 ||||||||| |||||||||||||| Sbjct: 180018 tgctgctgcctctcttcttctcct 180041
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tgcccactgcccactgccaa 92 |||||||||||||||||||| Sbjct: 75660 tgcccactgcccactgccaa 75679
>ref|XM_429644.1| PREDICTED: Gallus gallus LOC419291 (LOC419291), mRNA Length = 970 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cctgcccactgcccactgcc 90 |||||||||||||||||||| Sbjct: 518 cctgcccactgcccactgcc 499
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence Length = 191100 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tgctgctgcttctcttcttctcct 269 ||||||||| |||||||||||||| Sbjct: 4644 tgctgctgcctctcttcttctcct 4667
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 tgctgctgcttctcttcttctcct 269 ||||||||| |||||||||||||| Sbjct: 35749 tgctgctgcctctcttcttctcct 35726
>gb|AC134406.14| Mus musculus chromosome 9, clone RP24-349J23, complete sequence Length = 192663 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 ctgctgcttctcttcttctccttccctc 275 |||||||||||| ||||||||| ||||| Sbjct: 120038 ctgctgcttctcctcttctcctcccctc 120065
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gctgagtgaggtgagaggca 64 |||||||||||||||||||| Sbjct: 197112 gctgagtgaggtgagaggca 197131
>gb|AC127547.2| Mus musculus BAC clone RP24-498C13 from chromosome 8, complete sequence Length = 151070 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 113275 tcttcttctccttccctctc 113256
>gb|AC129079.5| Mus musculus BAC clone RP24-126J17 from chromosome 7, complete sequence Length = 180663 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 140963 ctgctgctgcttctcttctt 140944
>gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome 9, complete sequence Length = 135119 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcccctgctgctgcttct 258 |||||||||||||||||||| Sbjct: 40946 cttcccctgctgctgcttct 40965
>ref|XM_800707.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503851.40) partial mRNA Length = 2604 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gccctttcccagcaatggag 235 |||||||||||||||||||| Sbjct: 314 gccctttcccagcaatggag 333
>gb|AC128702.4| Mus musculus BAC clone RP24-239M3 from chromosome 9, complete sequence Length = 159431 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 ctgctgcttctcttcttctccttccctc 275 |||||||||||| ||||||||| ||||| Sbjct: 116743 ctgctgcttctcctcttctcctcccctc 116716
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 ttcctttgtgtcatttgcca 23 |||||||||||||||||||| Sbjct: 78923 ttcctttgtgtcatttgcca 78942
>ref|XM_811253.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506743.140) partial mRNA Length = 2607 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gccctttcccagcaatggag 235 |||||||||||||||||||| Sbjct: 314 gccctttcccagcaatggag 333
>gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosome 19, complete sequence Length = 189613 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 ctgctgcttctcttcttctccttccctc 275 ||||||||||||||| ||||| |||||| Sbjct: 135096 ctgctgcttctcttcctctccctccctc 135123
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 40.1 bits (20), Expect = 6.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 245 ctgctgctgcttct-cttcttctccttccctc 275 |||||||||||||| |||||||||| |||||| Sbjct: 91209 ctgctgctgcttctccttcttctccctccctc 91178
>gb|AC148227.14| Medicago truncatula clone mth2-8f11, complete sequence Length = 116139 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 cttcttctccttccctctcgcgcc 282 ||||||||||||| |||||||||| Sbjct: 94301 cttcttctccttctctctcgcgcc 94324
>gb|AC107638.17| Mus musculus, clone RP23-44D14, complete sequence Length = 231286 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 12057 ctgctgctgcttctcttctt 12038
>emb|AL645817.1| Human DNA sequence from clone RP1-2A2 on chromosome Xq21, complete sequence Length = 129249 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 117169 ctgctgctgcttctcttctt 117188
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccctccctgcccactgccca 85 |||||||||||||||||||| Sbjct: 61674 ccctccctgcccactgccca 61655
>emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chromosome 1p21.2-22.1 Contains a ribosomal protein L7 (RPL7) pseudogene, the PTBP2 gene for polypyrimidine tract binding protein 2 and a CpG island, complete sequence Length = 187378 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gctgagtgaggtgagaggca 64 |||||||||||||||||||| Sbjct: 92838 gctgagtgaggtgagaggca 92857
>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains the KCNK1 gene for potassium channel subfamily K member 1 and one CpG island, complete sequence Length = 71371 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 245 ctgctgctgcttct-cttcttctccttc 271 |||||||||||||| ||||||||||||| Sbjct: 52401 ctgctgctgcttcttcttcttctccttc 52428
>emb|AL137859.3| Human DNA sequence from clone RP4-537F10 on chromosome 1p31.1-31.3 Contains part of the ROR1 gene for receptor tyrosine kinase-like orphan receptor 1, complete sequence Length = 97234 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 gctgctgcttctcttcttctcctt 270 |||||||||||||| ||||||||| Sbjct: 4615 gctgctgcttctctccttctcctt 4638
>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1 Contains the MGAT3 gene for mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, the gene for a predicted protein, the ATF4 gene for activating transcription factor 4 (tax-responsive enhancer element B67) and the 5' end of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit. Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 112460 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 cttcccctgctgctgcttctcttc 262 ||||||||||||||||| |||||| Sbjct: 101245 cttcccctgctgctgctcctcttc 101268
>ref|XM_776502.1| PREDICTED: Strongylocentrotus purpuratus similar to senescence downregulated leo1-like (LOC576164), partial mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 137 tcttcttctccttccctctc 118
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccggcgccggccaccggcc 299 |||||||||||||||||||| Sbjct: 44890 gccggcgccggccaccggcc 44871
>emb|AL513411.1|NCG65A3 Neurospora crassa DNA linkage group V Cosmid contig G65A3 Length = 62544 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gtgcttcccctgctgctgct 255 |||||||||||||||||||| Sbjct: 40643 gtgcttcccctgctgctgct 40662
>emb|AL031027.1|DMC80H7 Drosophila melanogaster cosmid clone 80H7 Length = 45861 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctgcccactgcccactgcca 91 |||||||||||||||||||| Sbjct: 43885 ctgcccactgcccactgcca 43866
>emb|AJ277662.1|HSA277662 Homo sapiens partial TUB gene for tubby (mouse) homolog and LMO1 gene for LIM domain only 1 protein Length = 174986 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccctgcccactgcccactgc 89 |||||||||||||||||||| Sbjct: 159383 ccctgcccactgcccactgc 159402
>gb|BC099771.1| Rattus norvegicus cDNA clone IMAGE:7931886 Length = 2247 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 catcagagctgagctgagtg 52 |||||||||||||||||||| Sbjct: 339 catcagagctgagctgagtg 358
>emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chromosome 11 Contains a novel gene, complete sequence Length = 189495 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccctgcccactgcccactgc 89 |||||||||||||||||||| Sbjct: 83838 ccctgcccactgcccactgc 83819
>emb|AL954247.2| Pan troglodytes chromosome 22 clone CH251-479I13 map 22q22.3, complete sequence Length = 143192 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cccactgcccactgccaact 94 |||||||||||||||||||| Sbjct: 78608 cccactgcccactgccaact 78627
>gb|AC108784.12| Mus musculus chromosome 8, clone RP24-181O5, complete sequence Length = 160801 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 119924 tcttcttctccttccctctc 119943
>gb|AC158802.3| Mus musculus 10 BAC RP24-328C19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 140389 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccctctc 277 ||||||||||||||| |||||||| Sbjct: 68927 cttctcttcttctccctccctctc 68950
>gb|AC091013.7| Homo sapiens chromosome 11, clone RP11-379P15, complete sequence Length = 223741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ccctgcccactgcccactgc 89 |||||||||||||||||||| Sbjct: 139683 ccctgcccactgcccactgc 139664
>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181360 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctgcccactgcccactgcca 91 |||||||||||||||||||| Sbjct: 176248 ctgcccactgcccactgcca 176229
>dbj|AK127838.1| Homo sapiens cDNA FLJ45941 fis, clone PLACE7006090, highly similar to Maltase-glucoamylase, intestinal Length = 4802 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccctgcccactgcccactg 88 |||||||||||||||||||| Sbjct: 900 tccctgcccactgcccactg 881
>gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, complete sequence Length = 201251 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cctccctgcccactgcccac 86 |||||||||||||||||||| Sbjct: 3347 cctccctgcccactgcccac 3328
>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222518 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccc 273 |||||||||||||||||||| Sbjct: 74655 cttctcttcttctccttccc 74674
>gb|AC022426.5| Homo sapiens chromosome 5 clone CTD-2315O11, complete sequence Length = 110833 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cctccctgcccactgcccac 86 |||||||||||||||||||| Sbjct: 94948 cctccctgcccactgcccac 94967
>gb|AC011400.5| Homo sapiens chromosome 5 clone CTB-31E20, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cctccctgcccactgcccac 86 |||||||||||||||||||| Sbjct: 22599 cctccctgcccactgcccac 22618
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence Length = 191041 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tccctgcccactgcccactg 88 |||||||||||||||||||| Sbjct: 51199 tccctgcccactgcccactg 51180
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccc 273 |||||||||||||||||||| Sbjct: 79387 cttctcttcttctccttccc 79406
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gcgtgctcaagaactgggac 394 |||||||||||||||||||| Sbjct: 1085432 gcgtgctcaagaactgggac 1085413
>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence Length = 217987 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ctcttcttctccttccctct 276 |||||||||||||||||||| Sbjct: 19431 ctcttcttctccttccctct 19412
>dbj|AK086961.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030016B02 product:unclassifiable, full insert sequence Length = 2566 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tctcttcttctccttccctc 275 |||||||||||||||||||| Sbjct: 295 tctcttcttctccttccctc 314
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcccactgcccactgccaac 93 |||||||||||||||||||| Sbjct: 20382217 gcccactgcccactgccaac 20382236
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ttccatgtttgaacacacaa 205 |||||||||||||||||||| Sbjct: 19857069 ttccatgtttgaacacacaa 19857050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 1912246 tcttcttctccttccctctc 1912227
>emb|BX818609.1|CNS0AAXS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 815 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctcctt 270 |||||||||||||||||||| Sbjct: 47 ctgcttctcttcttctcctt 28
>gb|AC016732.7| Homo sapiens BAC clone RP11-389E16 from 2, complete sequence Length = 176741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cctgctgctgcttctcttct 263 |||||||||||||||||||| Sbjct: 78858 cctgctgctgcttctcttct 78839
>gb|BT003682.1| Arabidopsis thaliana At1g79200 mRNA, complete cds Length = 480 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctcctt 270 |||||||||||||||||||| Sbjct: 41 ctgcttctcttcttctcctt 22
>ref|XM_342483.2| PREDICTED: Rattus norvegicus similar to 1700030A21Rik protein (LOC362184), mRNA Length = 800 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 catcagagctgagctgagtg 52 |||||||||||||||||||| Sbjct: 491 catcagagctgagctgagtg 510
>ref|XM_215605.3| PREDICTED: Rattus norvegicus solute carrier family 27 (fatty acid transporter), member 3 (predicted) (Slc27a3_predicted), mRNA Length = 2242 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gcccactgcccactgccaac 93 |||||||||||||||||||| Sbjct: 1393 gcccactgcccactgccaac 1374
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcccactgcccactgccaac 93 |||||||||||||||||||| Sbjct: 10356 gcccactgcccactgccaac 10375
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ttccatgtttgaacacacaa 205 |||||||||||||||||||| Sbjct: 21719 ttccatgtttgaacacacaa 21700
>emb|AL928798.20| Mouse DNA sequence from clone RP23-7A19 on chromosome 2, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 6.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 245 ctgctgctgcttct-cttcttctccttccctc 275 |||||||||||||| |||||||||| |||||| Sbjct: 34332 ctgctgctgcttctccttcttctccctccctc 34363
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 116825 tcttcttctccttccctctc 116806
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ttccatgtttgaacacacaa 205 |||||||||||||||||||| Sbjct: 97228 ttccatgtttgaacacacaa 97209
>gb|AC153884.1| Mus musculus 6 BAC RP23-476E22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195597 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tctcttcttctccttccctc 275 |||||||||||||||||||| Sbjct: 59211 tctcttcttctccttccctc 59192
>gb|AC158677.2| Mus musculus 6 BAC RP23-175H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224075 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tctcttcttctccttccctc 275 |||||||||||||||||||| Sbjct: 170490 tctcttcttctccttccctc 170471
>dbj|AK118564.1| Arabidopsis thaliana At1g79200 mRNA for unknown protein, complete cds, clone: RAFL19-79-K03 Length = 696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctgcttctcttcttctcctt 270 |||||||||||||||||||| Sbjct: 52 ctgcttctcttcttctcctt 33
>gb|AC006531.1|AC006531 Homo sapiens chromosome 16 clone 113K5, complete sequence Length = 167525 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tctgcttgcctgcttccatg 192 |||||||||||||||||||| Sbjct: 156707 tctgcttgcctgcttccatg 156726
>gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene, partial cds; and TrxA (trxA), Orf205, ParB (parB), ParA (parA), GidB (gidB), Jag (jag), Orf431, Orf124, RNase P protein (rnpB), ribosomal protein rpmH (rpmH), DnaA (dnaA), and DnaN (dnaN) genes, complete cds Length = 12198 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gccggcgccggccaccggcc 299 |||||||||||||||||||| Sbjct: 9071 gccggcgccggccaccggcc 9090
>emb|AJ277661.1|HSA277661 Homo sapiens partial LMO1 gene for LIM domain only 1 protein, exon 1 Length = 131145 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccctgcccactgcccactgc 89 |||||||||||||||||||| Sbjct: 5682 ccctgcccactgcccactgc 5701
>ref|NM_209666.1| Eremothecium gossypii ADR217Cp (ADR217C), mRNA Length = 336 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gcgtgctcaagaactgggac 394 |||||||||||||||||||| Sbjct: 149 gcgtgctcaagaactgggac 168
>emb|Z84815.1|HS2A2A Human DNA sequence from PAC 2A2 on chromosome X Length = 32671 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 12081 ctgctgctgcttctcttctt 12062
>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete sequence Length = 304204 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctgcccactgcccactgcca 91 |||||||||||||||||||| Sbjct: 38832 ctgcccactgcccactgcca 38813
>gb|AC154589.3| Mus musculus BAC clone RP23-367D5 from chromosome 14, complete sequence Length = 205889 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 245 ctgctgctgcttct-cttcttctccttc 271 |||||||||||||| ||||||||||||| Sbjct: 182821 ctgctgctgcttcttcttcttctccttc 182848
>emb|AL935064.7| Zebrafish DNA sequence from clone CH211-153K23, complete sequence Length = 157256 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccc 273 |||||||||||||||||||| Sbjct: 28203 cttctcttcttctccttccc 28222
>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete sequence Length = 181925 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ctgcttctcttcttctcctt 270 |||||||||||||||||||| Sbjct: 65170 ctgcttctcttcttctcctt 65189
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ctcttcttctccttccctct 276 |||||||||||||||||||| Sbjct: 194083 ctcttcttctccttccctct 194064
>gb|U94785.1|U94785 Helianthus annuus unconventional myosin (hamy5) mRNA, complete cds Length = 5228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 2567 ctgctgctgcttctcttctt 2548
>gb|U94782.1|U94782 Helianthus annuus unconventional myosin (hamy2) mRNA, partial cds Length = 4059 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ctgctgctgcttctcttctt 264 |||||||||||||||||||| Sbjct: 2641 ctgctgctgcttctcttctt 2622
>gb|AC136316.13| Mus musculus chromosome 1, clone RP24-331K22, complete sequence Length = 197109 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cttctcttcttctccttccctctc 277 ||||||||||||||||| |||||| Sbjct: 65066 cttctcttcttctcctttcctctc 65043
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cctgcccactgcccactgcc 90 |||||||||||||||||||| Sbjct: 147098 cctgcccactgcccactgcc 147117
>gb|U73635.1|U73635 Human Chromosome 11 Cosmid cSRL156b6, complete sequence Length = 33676 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccctgcccactgcccactgc 89 |||||||||||||||||||| Sbjct: 20136 ccctgcccactgcccactgc 20155
>gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosome 14, complete sequence Length = 154465 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 245 ctgctgctgcttc-tcttcttctccttc 271 ||||||||||||| |||||||||||||| Sbjct: 141842 ctgctgctgcttcttcttcttctccttc 141815
>dbj|AP007297.1| Lotus japonicus genomic DNA, clone:LjT02G13, TM0489a, complete sequence Length = 72531 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 10895 tcttcttctccttccctctc 10914
>dbj|AP006423.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT23C14, TM0311, complete sequence Length = 82652 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 56034 tcttcttctccttccctctc 56015
>emb|AL928557.6| Mouse DNA sequence from clone RP23-349H7 on chromosome 2, complete sequence Length = 159128 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cttctcttcttctccttccctctc 277 |||||||||||||| ||||||||| Sbjct: 24164 cttctcttcttctctttccctctc 24187
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tcttcttctccttccctctc 277 |||||||||||||||||||| Sbjct: 2122 tcttcttctccttccctctc 2141
>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete sequence Length = 227395 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ctgctgctgcttctcttcttctccttcc 272 |||||||||||||| ||||||| ||||| Sbjct: 219379 ctgctgctgcttcttttcttcttcttcc 219406 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,627,151 Number of Sequences: 3902068 Number of extensions: 5627151 Number of successful extensions: 151681 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 150408 Number of HSP's gapped (non-prelim): 1277 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)