Clone Name | bastl38b10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_472014.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2958 Score = 500 bits (252), Expect = e-138 Identities = 422/481 (87%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| ||||| ||||| || ||||| ||||| || || ||||| |||||||||| Sbjct: 344 ctaatgatgatccaaggaagttacggcctggtgagattgacccgaaccccgagtcaaaac 403 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 |||||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 404 ctgcacgtcctgatcctgttgatatggatgaagatgaaaaggagatgctttctgaggcaa 463 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 464 gggctcgcttagctaacaccaggggtaaaaaggcaaagcggaaggcaagagagaaacaac 523 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggta 240 |||||||||| ||||| ||||| |||||||| |||||||||||| | ||||| ||||||| Sbjct: 524 ttgaagaggcaaggcgacttgcctcactgcagaaaaggagagaattaaaggcggctggta 583 Query: 241 ttgacaaccggcacnnnnnnngaaagagaaagggaattgactataatgccgagatccctt 300 |||| | ||||| ||||||||||||| || || |||||||| ||||| |||| Sbjct: 584 ttgatacacggcagaggaagagaaagagaaagggtatcgattataatgctgagattcctt 643 Query: 301 ttgaaaagagaccccctccaggtttttatgatacagtgggcgaggacaggccacttgagc 360 |||||||||| || |||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 644 ttgaaaagaggccgcctccaggtttttatgatactgttggtgaggacaggccacttgagc 703 Query: 361 atgtgcagtttccaactaccattgaggagcttgaagggaggagaagagtggatgtagagg 420 |||| ||||| ||||| || ||||||||||||||||| | ||||||||| || |||||| Sbjct: 704 atgtacagttcccaaccactattgaggagcttgaaggtaagagaagagtagacatagagg 763 Query: 421 ctcaattaagaaagcaagacattgccaagaacaagattctgcagaggcaggatgcccctg 480 | ||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 764 cacaattaagaaaacaagacattgccaggaacaagattctccagaggcaggatgctcctg 823 Query: 481 c 481 | Sbjct: 824 c 824
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 500 bits (252), Expect = e-138 Identities = 422/481 (87%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| ||||| ||||| || ||||| ||||| || || ||||| |||||||||| Sbjct: 125147 ctaatgatgatccaaggaagttacggcctggtgagattgacccgaaccccgagtcaaaac 125206 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 |||||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 125207 ctgcacgtcctgatcctgttgatatggatgaagatgaaaaggagatgctttctgaggcaa 125266 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 125267 gggctcgcttagctaacaccaggggtaaaaaggcaaagcggaaggcaagagagaaacaac 125326 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggta 240 |||||||||| ||||| ||||| |||||||| |||||||||||| | ||||| ||||||| Sbjct: 125327 ttgaagaggcaaggcgacttgcctcactgcagaaaaggagagaattaaaggcggctggta 125386 Query: 241 ttgacaaccggcacnnnnnnngaaagagaaagggaattgactataatgccgagatccctt 300 |||| | ||||| ||||||||||||| || || |||||||| ||||| |||| Sbjct: 125387 ttgatacacggcagaggaagagaaagagaaagggtatcgattataatgctgagattcctt 125446 Query: 301 ttgaaaagagaccccctccaggtttttatgatacagtgggcgaggacaggccacttgagc 360 |||||||||| || |||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 125447 ttgaaaagaggccgcctccaggtttttatgatactgttggtgaggacaggccacttgagc 125506 Query: 361 atgtgcagtttccaactaccattgaggagcttgaagggaggagaagagtggatgtagagg 420 |||| ||||| ||||| || ||||||||||||||||| | ||||||||| || |||||| Sbjct: 125507 atgtacagttcccaaccactattgaggagcttgaaggtaagagaagagtagacatagagg 125566 Query: 421 ctcaattaagaaagcaagacattgccaagaacaagattctgcagaggcaggatgcccctg 480 | ||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 125567 cacaattaagaaaacaagacattgccaggaacaagattctccagaggcaggatgctcctg 125626 Query: 481 c 481 | Sbjct: 125627 c 125627
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 500 bits (252), Expect = e-138 Identities = 422/481 (87%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| ||||| ||||| || ||||| ||||| || || ||||| |||||||||| Sbjct: 16595914 ctaatgatgatccaaggaagttacggcctggtgagattgacccgaaccccgagtcaaaac 16595973 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 |||||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 16595974 ctgcacgtcctgatcctgttgatatggatgaagatgaaaaggagatgctttctgaggcaa 16596033 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 16596034 gggctcgcttagctaacaccaggggtaaaaaggcaaagcggaaggcaagagagaaacaac 16596093 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggta 240 |||||||||| ||||| ||||| |||||||| |||||||||||| | ||||| ||||||| Sbjct: 16596094 ttgaagaggcaaggcgacttgcctcactgcagaaaaggagagaattaaaggcggctggta 16596153 Query: 241 ttgacaaccggcacnnnnnnngaaagagaaagggaattgactataatgccgagatccctt 300 |||| | ||||| ||||||||||||| || || |||||||| ||||| |||| Sbjct: 16596154 ttgatacacggcagaggaagagaaagagaaagggtatcgattataatgctgagattcctt 16596213 Query: 301 ttgaaaagagaccccctccaggtttttatgatacagtgggcgaggacaggccacttgagc 360 |||||||||| || |||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 16596214 ttgaaaagaggccgcctccaggtttttatgatactgttggtgaggacaggccacttgagc 16596273 Query: 361 atgtgcagtttccaactaccattgaggagcttgaagggaggagaagagtggatgtagagg 420 |||| ||||| ||||| || ||||||||||||||||| | ||||||||| || |||||| Sbjct: 16596274 atgtacagttcccaaccactattgaggagcttgaaggtaagagaagagtagacatagagg 16596333 Query: 421 ctcaattaagaaagcaagacattgccaagaacaagattctgcagaggcaggatgcccctg 480 | ||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 16596334 cacaattaagaaaacaagacattgccaggaacaagattctccagaggcaggatgctcctg 16596393 Query: 481 c 481 | Sbjct: 16596394 c 16596394
>dbj|AK102248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088F07, full insert sequence Length = 3483 Score = 500 bits (252), Expect = e-138 Identities = 422/481 (87%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| ||||| ||||| || ||||| ||||| || || ||||| |||||||||| Sbjct: 611 ctaatgatgatccaaggaagttacggcctggtgagattgacccgaaccccgagtcaaaac 670 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 |||||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 671 ctgcacgtcctgatcctgttgatatggatgaagatgaaaaggagatgctttctgaggcaa 730 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 731 gggctcgcttagctaacaccaggggtaaaaaggcaaagcggaaggcaagagagaaacaac 790 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggta 240 |||||||||| ||||| ||||| |||||||| |||||||||||| | ||||| ||||||| Sbjct: 791 ttgaagaggcaaggcgacttgcctcactgcagaaaaggagagaattaaaggcggctggta 850 Query: 241 ttgacaaccggcacnnnnnnngaaagagaaagggaattgactataatgccgagatccctt 300 |||| | ||||| ||||||||||||| || || |||||||| ||||| |||| Sbjct: 851 ttgatacacggcagaggaagagaaagagaaagggtatcgattataatgctgagattcctt 910 Query: 301 ttgaaaagagaccccctccaggtttttatgatacagtgggcgaggacaggccacttgagc 360 |||||||||| || |||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 911 ttgaaaagaggccgcctccaggtttttatgatactgttggtgaggacaggccacttgagc 970 Query: 361 atgtgcagtttccaactaccattgaggagcttgaagggaggagaagagtggatgtagagg 420 |||| ||||| ||||| || ||||||||||||||||| | ||||||||| || |||||| Sbjct: 971 atgtacagttcccaaccactattgaggagcttgaaggtaagagaagagtagacatagagg 1030 Query: 421 ctcaattaagaaagcaagacattgccaagaacaagattctgcagaggcaggatgcccctg 480 | ||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 1031 cacaattaagaaaacaagacattgccaggaacaagattctccagaggcaggatgctcctg 1090 Query: 481 c 481 | Sbjct: 1091 c 1091
>gb|AF458962.1|AF458962 Zea mays CDC5 protein (CDC5) mRNA, complete cds Length = 3188 Score = 436 bits (220), Expect = e-119 Identities = 414/481 (86%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| || || ||| |||| ||||| ||||| || ||||||||||||||||| | Sbjct: 494 ctaatgatgatcctaggaagctgcggcctggcgagattgacccaaaccctgagtcaaagc 553 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 | |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||||| | Sbjct: 554 ccgcacgtcctgatcctgttgatatggatgaagatgaaaaagaaatgctttctgaggcta 613 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| |||||||||||||| |||||||||||||| |||||||||||||| |||||||| | Sbjct: 614 gggcccgcttagctaacactaggggtaaaaaggccaaacggaaggcaagggagaaacaac 673 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggta 240 ||||||| || || ||||||| ||||| ||||||||||||||| ||||||||||||||| Sbjct: 674 ttgaagaagcaagaaggcttgcttcactacaaaaaaggagagaattgaaggcagctggta 733 Query: 241 ttgacaaccggcacnnnnnnngaaagagaaagggaattgactataatgccgagatccctt 300 |||| | || ||| ||||||||||||| |||||||| ||||| ||||| || | Sbjct: 734 ttgatacacgccacagaaaaagaaagagaaaggggattgactacaatgctgagattccat 793 Query: 301 ttgaaaagagaccccctccaggtttttatgatacagtgggcgaggacaggccacttgagc 360 ||||||||||||| ||| |||||||||||||||| || || |||||||| |||| ||| | Sbjct: 794 ttgaaaagagaccaccttcaggtttttatgatactgttggtgaggacagaccacctgaac 853 Query: 361 atgtgcagtttccaactaccattgaggagcttgaagggaggagaagagtggatgtagagg 420 |||| ||||||||||| |||||||||| ||||||||||| |||||||| ||| |||||| Sbjct: 854 atgtacagtttccaacaaccattgaggggcttgaagggaagagaagagcagatatagagg 913 Query: 421 ctcaattaagaaagcaagacattgccaagaacaagattctgcagaggcaggatgcccctg 480 | ||||||||||| || || ||||||| ||||||||| |||||| | ||||||||||||| Sbjct: 914 cacaattaagaaaacaggatattgccaggaacaagatcctgcagcgacaggatgcccctg 973 Query: 481 c 481 | Sbjct: 974 c 974
>gb|BT013850.1| Lycopersicon esculentum clone 132810F, mRNA sequence Length = 1992 Score = 115 bits (58), Expect = 1e-22 Identities = 193/238 (81%) Strand = Plus / Plus Query: 1 ctaatgatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaac 60 |||||||||| |||||||| ||| || || ||||| ||||| ||||| || ||||| | Sbjct: 531 ctaatgatgatccaagaaaattgaagcccggagagattgatcctaacccggaatcaaagc 590 Query: 61 ctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaa 120 |||| ||||| ||||||||||| ||||| ||||| || || |||||||||||||| ||| Sbjct: 591 ctgctcgtcctgatcctgttgatatggatgaggacgagaaagaaatgctttctgaagcac 650 Query: 121 gggcacgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagc 180 |||| | || || ||||| || || || ||||| ||| |||| || ||||| || |||| Sbjct: 651 gggctaggttggccaacacaagaggcaagaaggctaaaaggaaagccagagaaaagcagc 710 Query: 181 ttgaagaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctgg 238 ||||||||||| || ||||||| || | || || ||||||||||||||||| ||||| Sbjct: 711 ttgaagaggcgcggaggcttgcttctttacagaagaggagagaactgaaggctgctgg 768 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 367 agtttccaactaccattgaggagcttgaagg 397 |||||||||||||||||||||| || ||||| Sbjct: 897 agtttccaactaccattgaggaactagaagg 927
>ref|NM_100849.2| Arabidopsis thaliana ATCDC5; DNA binding / transcription factor AT1G09770 (ATCDC5) mRNA, complete cds Length = 2934 Score = 109 bits (55), Expect = 8e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 510 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 569 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 570 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 629 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 630 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 689 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 || || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 690 gaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 748 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagag 310 |||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 766 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagag 814 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 873 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 922
>gb|BT008801.1| Arabidopsis thaliana At1g09770 gene, complete cds Length = 2535 Score = 109 bits (55), Expect = 8e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 349 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 408 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 409 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 468 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 469 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 528 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 || || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 529 gaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 587 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagag 310 |||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 605 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagag 653 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 712 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 761
>gb|AY093057.1| Arabidopsis thaliana putative Myb DNA-binding protein (At1g09770) mRNA, complete cds Length = 2931 Score = 109 bits (55), Expect = 8e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 510 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 569 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 570 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 629 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 630 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 689 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 || || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 690 gaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 748 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagag 310 |||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 766 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagag 814 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 873 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 922
>dbj|D58424.1| Arabidopsis thaliana mRNA for Myb-like DNA binding protein, complete cds Length = 2807 Score = 109 bits (55), Expect = 8e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 432 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 491 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 492 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 551 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 552 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 611 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 || || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 612 gaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 670 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagagaccccctccag 321 |||||||||||||||| ||||||||||| || || |||||||||||||| | ||| | | Sbjct: 688 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagagggcacctgcgg 747 Query: 322 gtttttatgatac 334 | ||||||||||| Sbjct: 748 gattttatgatac 760 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 795 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 844
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 109 bits (55), Expect = 8e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 49501 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 49560 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 49561 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 49620 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 49621 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 49680 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 || || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 49681 gaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 49739 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagag 310 |||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 49757 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagag 49805 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 49864 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 49913
>gb|AY519553.1| Arabidopsis thaliana MYB transcription factor (At1g09770) mRNA, complete cds Length = 2535 Score = 101 bits (51), Expect = 2e-18 Identities = 192/239 (80%) Strand = Plus / Plus Query: 6 gatgacccaagaaagttgcgacctggggagatagatccaaaccctgagtcaaaacctgca 65 ||||| ||| |||| || || ||||| ||||| ||||| ||||| || |||| ||||| Sbjct: 349 gatgatccacgaaaattacgtcctggtgagattgatccgaacccagaagcaaagcctgct 408 Query: 66 cgtccagatcctgttgacatggacgaggatgaaaaggaaatgctttctgaggcaagggca 125 ||||| ||||| || ||||||||||| ||||| || |||||||||||||| ||||| || Sbjct: 409 cgtcctgatccggtagacatggacgaagatgagaaagaaatgctttctgaagcaagagct 468 Query: 126 cgcttagctaacaccaggggtaaaaaggcaaaacggaaggcaagagagaaacagcttgaa 185 | || |||||||| ||||| || ||||| ||| | || || ||||| ||||| ||||| Sbjct: 469 agattggctaacacgaggggaaagaaggctaaaagaaaagctagagaaaaacaacttgag 528 Query: 186 gaggcgaggcggcttgcatcactgcaaaaaaggagagaactgaaggcagctggtattga 244 | || || ||||||| || ||||||||||| |||||||| || |||||||| ||||| Sbjct: 529 aaagctagaaggcttgcttctctgcaaaaaagaagagaactaaaagcagctgggattga 587 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 262 gaaagagaaagggaattgactataatgccgagatcccttttgaaaagag 310 |||||||||||||||| ||||||||||| || || |||||||||||||| Sbjct: 605 gaaagagaaagggaatcgactataatgcagaaattccttttgaaaagag 653 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 tttccaactaccattgaggagcttgaagggaggagaagagtggatgtaga 418 ||||||||||||||||| || |||||||| | ||||||| |||||||| Sbjct: 712 tttccaactaccattgaagaacttgaaggaaaaagaagagctgatgtaga 761
>dbj|AK112077.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B04, full insert sequence Length = 2462 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 435 caagacattgccaagaacaagattctgcagaggcaggatgcccctgc 481 ||||||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 5 caagacattgccaggaacaagattctccagaggcaggatgctcctgc 51
>gb|BT025390.1| Bos taurus CDC5 cell division cycle 5-like (S. pombe) (CDC5L), mRNA, incomplete 3' cds Length = 698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 143/177 (80%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 27 cctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatg 86 ||||| || ||||||||||| || || |||| || ||||| || ||||| |||||||| Sbjct: 471 cctggagaaatagatccaaatccagaaacaaagccagcacggcctgatccgattgacatg 530 Query: 87 gacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacac-cagggg 145 || ||||||||| ||| ||||||||||| || || || ||| | |||||||| ||||| Sbjct: 531 gatgaggatgaattggagatgctttctgaagctagagcccgcctggctaacactcaggga 590 Query: 146 taaaaaggcaaaacggaaggcaagagagaaacagcttgaagaggcgaggcggcttgc 202 | |||| ||| | |||| ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 591 aagaaagccaaga-ggaaagcaagagagaaacagctggaagaagcaaggcgtcttgc 646
>gb|BC105417.1| Bos taurus cDNA clone MGC:128482 IMAGE:7984532, complete cds Length = 3021 Score = 65.9 bits (33), Expect = 1e-07 Identities = 143/177 (80%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 27 cctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatg 86 ||||| || ||||||||||| || || |||| || ||||| || ||||| |||||||| Sbjct: 482 cctggagaaatagatccaaatccagaaacaaagccagcacggcctgatccgattgacatg 541 Query: 87 gacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacac-cagggg 145 || ||||||||| ||| ||||||||||| || || || ||| | |||||||| ||||| Sbjct: 542 gatgaggatgaattggagatgctttctgaagctagagcccgcctggctaacactcaggga 601 Query: 146 taaaaaggcaaaacggaaggcaagagagaaacagcttgaagaggcgaggcggcttgc 202 | |||| ||| | |||| ||||||||||||||||| ||||| || ||||| ||||| Sbjct: 602 aagaaagccaaga-ggaaagcaagagagaaacagctggaagaagcaaggcgtcttgc 657
>gb|AY810448.1| Schistosoma japonicum SJCHGC03537 protein mRNA, partial cds Length = 682 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 39 gatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatggacgaggatgaa 98 |||||||| ||||| | |||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 376 gatccaaatcctgaaaccaaacctgcacgtccagatcccgttgatatggatgaagatgaa 435 Query: 99 aaggaaatgctttc 112 ||||||||||| Sbjct: 436 ctagaaatgctttc 449
>ref|XM_761487.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_1059) partial mRNA Length = 1977 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 96 gaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccaggggtaaaaaggca 155 |||||||||||| | |||| ||||| ||||| ||||||||||| | ||||||||||| Sbjct: 433 gaaaaggaaatgttggctgaagcaagagcacgtttagctaacacacgtggtaaaaaggct 492 Query: 156 aaacggaaggca 167 ||| |||||||| Sbjct: 493 aaaaggaaggca 504
>dbj|AB067691.1| Lentinula edodes cdc5 mRNA for CDC5, complete cds Length = 2529 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 46 accctgagtcaaaacctgcacgtccagatcctgttgacatggacgaggatgaaaaggaaa 105 |||| ||| |||| || ||||| |||||||| |||| ||||| || ||||||||||||| Sbjct: 425 accccgagacaaagcccgcacgaccagatcccattgatatggatgaagatgaaaaggaaa 484 Query: 106 tgctttc 112 ||||||| Sbjct: 485 tgctttc 491
>gb|BC044511.1| Danio rerio CDC5 cell division cycle 5-like (S. pombe), mRNA (cDNA clone MGC:55853 IMAGE:3818237), complete cds Length = 2802 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 282 tataatgccgagatcccttttgaaaagagaccccctccaggtttttatgatac 334 |||||||| |||||||| ||||| |||| |||| ||| |||||||||||||| Sbjct: 787 tataatgctgagatcccgtttgagaagaaacccgctcagggtttttatgatac 839
>ref|NM_201084.1| Danio rerio CDC5 cell division cycle 5-like (S. pombe) (cdc5l), mRNA Length = 2802 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 282 tataatgccgagatcccttttgaaaagagaccccctccaggtttttatgatac 334 |||||||| |||||||| ||||| |||| |||| ||| |||||||||||||| Sbjct: 787 tataatgctgagatcccgtttgagaagaaacccgctcagggtttttatgatac 839
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 282 tataatgccgagatcccttttgaaaagagaccccctccaggtttttatgatac 334 |||||||| |||||||| ||||| |||| |||| ||| |||||||||||||| Sbjct: 11058 tataatgctgagatcccgtttgagaagaaacccgctcagggtttttatgatac 11006
>gb|BC073314.1| Xenopus laevis hypothetical protein LOC443641, mRNA (cDNA clone IMAGE:5511852), partial cds Length = 734 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 160 ggaaggcaagagagaaacagcttgaagaggcgaggcggcttgca 203 |||| ||||||||||||||||| ||||| || ||||| |||||| Sbjct: 629 ggaaagcaagagagaaacagctggaagaagccaggcgtcttgca 672
>ref|XM_420058.1| PREDICTED: Gallus gallus similar to KIAA0432 (LOC422052), mRNA Length = 3015 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 147 aaaaaggcaaaacggaaggcaagagagaaacagcttgaagaggcgaggcggcttgc 202 |||||||||||| | || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 751 aaaaaggcaaaaagaaaagcaagagagaagcagctggaagaagctagacggcttgc 806
>gb|BC097531.1| Xenopus laevis cDNA clone MGC:114655 IMAGE:5506354, complete cds Length = 3050 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 160 ggaaggcaagagagaaacagcttgaagaggcgaggcggcttgca 203 |||| ||||||||||||||||| ||||| || ||||| |||||| Sbjct: 583 ggaaagcaagagagaaacagctggaagaagccaggcgtcttgca 626
>ref|NM_053527.1| Rattus norvegicus cell division cycle 5-like (S. pombe) (Cdc5l), mRNA Length = 2847 Score = 48.1 bits (24), Expect = 0.027 Identities = 75/92 (81%) Strand = Plus / Plus Query: 27 cctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatg 86 ||||| |||||||||||||| || || | ||||| || || || ||||| |||||||| Sbjct: 477 cctggagagatagatccaaatccagaaaccaaaccagcccggcctgatccaattgacatg 536 Query: 87 gacgaggatgaaaaggaaatgctttctgaggc 118 || ||||||||| || |||||||||||||| Sbjct: 537 gatgaggatgaacttgagatgctttctgaggc 568
>emb|BX933811.1| Gallus gallus finished cDNA, clone ChEST994c24 Length = 576 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 147 aaaaaggcaaaacggaaggcaagagagaaacagcttgaagaggcgaggcggcttgc 202 |||||||||||| | || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 263 aaaaaggcaaaaagaaaagcaagagagaagcagctggaagaagctagacggcttgc 318
>emb|BX932805.1| Gallus gallus finished cDNA, clone ChEST712k14 Length = 653 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 147 aaaaaggcaaaacggaaggcaagagagaaacagcttgaagaggcgaggcggcttgc 202 |||||||||||| | || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 590 aaaaaggcaaaaagaaaagcaagagagaagcagctggaagaagctagacggcttgc 645
>gb|BC087007.1| Rattus norvegicus cell division cycle 5-like (S. pombe), mRNA (cDNA clone IMAGE:7125496) Length = 2904 Score = 48.1 bits (24), Expect = 0.027 Identities = 75/92 (81%) Strand = Plus / Plus Query: 27 cctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatg 86 ||||| |||||||||||||| || || | ||||| || || || ||||| |||||||| Sbjct: 414 cctggagagatagatccaaatccagaaaccaaaccagcccggcctgatccaattgacatg 473 Query: 87 gacgaggatgaaaaggaaatgctttctgaggc 118 || ||||||||| || |||||||||||||| Sbjct: 474 gatgaggatgaacttgagatgctttctgaggc 505
>gb|AF000578.2|AF000578 Rattus norvegicus Cdc5-like protein mRNA, complete cds Length = 2847 Score = 48.1 bits (24), Expect = 0.027 Identities = 75/92 (81%) Strand = Plus / Plus Query: 27 cctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacatg 86 ||||| |||||||||||||| || || | ||||| || || || ||||| |||||||| Sbjct: 477 cctggagagatagatccaaatccagaaaccaaaccagcccggcctgatccaattgacatg 536 Query: 87 gacgaggatgaaaaggaaatgctttctgaggc 118 || ||||||||| || |||||||||||||| Sbjct: 537 gatgaggatgaacttgagatgctttctgaggc 568
>gb|BT014105.1| Lycopersicon esculentum clone 133209F, mRNA sequence Length = 811 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 agaactgaaggcagctggtatt 242 |||||||||||||||||||||| Sbjct: 271 agaactgaaggcagctggtatt 292
>gb|AY479981.1| Capsicum annuum induced protein BnC24B mRNA, partial sequence Length = 622 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 agaactgaaggcagctggtatt 242 |||||||||||||||||||||| Sbjct: 272 agaactgaaggcagctggtatt 293
>gb|AY395689.1| Solanum brevidens 60S ribosomal protein L13 (Ci-1) mRNA, partial cds Length = 635 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 agaactgaaggcagctggtatt 242 |||||||||||||||||||||| Sbjct: 265 agaactgaaggcagctggtatt 286
>emb|CT033724.1| Platynereis dumerilii EST IB0AAA15BC06EM1 Length = 848 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 69 ccagatcctgttgacatggacgaggatgaa 98 ||||||||| ||||||||||||| |||||| Sbjct: 481 ccagatcctattgacatggacgaagatgaa 510
>ref|XM_518512.1| PREDICTED: Pan troglodytes similar to CDC5-like; Cell division cycle 5, S. pombe, homolog-like; CDC5 (cell division cycle 5, S. pombe, homolog)-like; Cdc5-related protein (LOC462736), mRNA Length = 2499 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 405 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 464 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 465 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 524 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 525 aaagaaggccaagaggaaagcaagagagaaaca 557
>ref|NM_001253.2| Homo sapiens CDC5 cell division cycle 5-like (S. pombe) (CDC5L), mRNA Length = 3012 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 631 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 690 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 691 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 750 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 751 aaagaaggccaagaggaaagcaagagagaaaca 783
>gb|AC102075.7| Mus musculus chromosome 5, clone RP23-389F20, complete sequence Length = 208311 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 acttgagcatgtgcagtttcc 373 ||||||||||||||||||||| Sbjct: 95578 acttgagcatgtgcagtttcc 95598
>gb|BC001568.1| Homo sapiens CDC5 cell division cycle 5-like (S. pombe), mRNA (cDNA clone MGC:5485 IMAGE:3452352), complete cds Length = 2846 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 471 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 530 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 531 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 590 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 591 aaagaaggccaagaggaaagcaagagagaaaca 623
>gb|AC108798.11| Mus musculus chromosome 5, clone RP23-419N6, complete sequence Length = 211603 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 acttgagcatgtgcagtttcc 373 ||||||||||||||||||||| Sbjct: 120487 acttgagcatgtgcagtttcc 120507
>dbj|AK128737.1| Homo sapiens cDNA FLJ16777 fis, clone BRHIP2029567, highly similar to Homo sapiens CDC5 cell division cycle 5-like (S. pombe) (CDC5L) Length = 2836 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 490 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 549 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 550 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 609 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 610 aaagaaggccaagaggaaagcaagagagaaaca 642
>emb|CR594844.1| full-length cDNA clone CS0DJ015YB07 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2194 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 475 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 534 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 535 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 594 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 595 aaagaaggccaagaggaaagcaagagagaaaca 627
>gb|AE000511.1| Helicobacter pylori 26695, complete genome Length = 1667867 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ttaagaaagcaagacattgcc 446 ||||||||||||||||||||| Sbjct: 719914 ttaagaaagcaagacattgcc 719894
>gb|AC116108.9| Mus musculus chromosome 5, clone RP23-465P13, complete sequence Length = 179033 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 acttgagcatgtgcagtttcc 373 ||||||||||||||||||||| Sbjct: 158630 acttgagcatgtgcagtttcc 158650
>gb|U86753.1|HSU86753 Human Cdc5-related protein (PCDC5RP) mRNA, complete cds Length = 2409 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 372 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 431 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 432 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 491 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 492 aaagaaggccaagaggaaagcaagagagaaaca 524
>dbj|AB007892.2| Homo sapiens KIAA0432 mRNA, partial cds Length = 6201 Score = 42.1 bits (21), Expect = 1.6 Identities = 120/153 (78%) Strand = Plus / Plus Query: 26 acctggggagatagatccaaaccctgagtcaaaacctgcacgtccagatcctgttgacat 85 |||||| || ||||||||||| || || ||||||| || || || ||||| |||| || Sbjct: 454 acctggagaaatagatccaaatccagaaacaaaaccagcgcggcctgatccaattgatat 513 Query: 86 ggacgaggatgaaaaggaaatgctttctgaggcaagggcacgcttagctaacaccagggg 145 ||| ||||||||| || ||||||||||| || || || ||||| ||||| || ||| Sbjct: 514 ggatgaggatgaacttgagatgctttctgaagccagagcccgcttggctaatactcaggg 573 Query: 146 taaaaaggcaaaacggaaggcaagagagaaaca 178 || ||||| || |||| |||||||||||||| Sbjct: 574 aaagaaggccaagaggaaagcaagagagaaaca 606
>gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, complete sequence Length = 153281 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 atgtagaggctcaattaaga 431 |||||||||||||||||||| Sbjct: 67158 atgtagaggctcaattaaga 67139
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aaagagaaagggaattgact 282 |||||||||||||||||||| Sbjct: 74011 aaagagaaagggaattgact 74030
>ref|NM_016862.2| Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast) (Vti1a), mRNA Length = 3406 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 224 gagaaacagcttgaagaggc 243
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ggaaggcaagagagaaacag 179 |||||||||||||||||||| Sbjct: 113473 ggaaggcaagagagaaacag 113492
>gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome 19, complete sequence Length = 204855 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 6858 gagaaacagcttgaagaggc 6839
>gb|AC126047.3| Mus musculus BAC clone RP23-195C14 from X, complete sequence Length = 193191 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctccaggtttttatgataca 335 |||||||||||||||||||| Sbjct: 70793 ctccaggtttttatgataca 70774
>gb|BC019386.1| Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast), mRNA (cDNA clone MGC:30354 IMAGE:5012235), complete cds Length = 1122 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 520 gagaaacagcttgaagaggc 539
>emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on chromosome 13, complete sequence Length = 158083 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cggaaggcaagagagaaaca 178 |||||||||||||||||||| Sbjct: 127966 cggaaggcaagagagaaaca 127947
>gb|AC158350.7| Mus musculus chromosome 8, clone RP24-250A3, complete sequence Length = 174965 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 atgtagaggctcaattaaga 431 |||||||||||||||||||| Sbjct: 162759 atgtagaggctcaattaaga 162740
>gb|BC089321.1| Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast), mRNA (cDNA clone MGC:102006 IMAGE:6839437), complete cds Length = 4196 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 225 gagaaacagcttgaagaggc 244
>gb|BC012211.1| Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast), mRNA (cDNA clone IMAGE:3661147), containing frame-shift errors Length = 2611 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 220 gagaaacagcttgaagaggc 239
>dbj|AK135463.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820424O08 product:vesicle transport through interaction with t-SNAREs homolog 1A (yeast), full insert sequence Length = 1245 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 281 gagaaacagcttgaagaggc 300
>gb|AC104988.4| Homo sapiens chromosome 18, clone RP11-732E23, complete sequence Length = 171501 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tgtagaggctcaattaagaa 432 |||||||||||||||||||| Sbjct: 133697 tgtagaggctcaattaagaa 133678
>dbj|AK148281.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370076M11 product:vesicle transport through interaction with t-SNAREs homolog 1A (yeast), full insert sequence Length = 4345 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 249 gagaaacagcttgaagaggc 268
>dbj|AK035895.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630015E17 product:vesicle transport through interaction with t-SNAREs 1 homolog, full insert sequence Length = 2922 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 219 gagaaacagcttgaagaggc 238
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggaaggcaagagagaaacag 179 |||||||||||||||||||| Sbjct: 118229 ggaaggcaagagagaaacag 118210
>dbj|AK028646.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732424P06 product:vesicle transport through interaction with t-SNAREs 1 homolog, full insert sequence Length = 3406 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 224 gagaaacagcttgaagaggc 243
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aaaaaaggagagaactgaag 230 |||||||||||||||||||| Sbjct: 6523 aaaaaaggagagaactgaag 6542
>dbj|AK004751.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200014A22 product:vesicle transport through interaction with t-SNAREs 1 homolog, full insert sequence Length = 3351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 214 gagaaacagcttgaagaggc 233
>dbj|AK030538.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330429B06 product:vesicle transport through interaction with t-SNAREs 1 homolog, full insert sequence Length = 3372 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 243 gagaaacagcttgaagaggc 262
>dbj|AK014541.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631433P05 product:vesicle transport through interaction with t-SNAREs 1 homolog, full insert sequence Length = 1599 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 251 gagaaacagcttgaagaggc 270
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 actgcaaaaaaggagagaactgaa 229 |||||||| ||||||||||||||| Sbjct: 133806 actgcaaacaaggagagaactgaa 133829
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 aaagagaaagggaattgact 282 |||||||||||||||||||| Sbjct: 25557604 aaagagaaagggaattgact 25557623
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaaaaggagagaactgaag 230 |||||||||||||||||||| Sbjct: 29356108 aaaaaaggagagaactgaag 29356089
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 actgcaaaaaaggagagaactgaa 229 |||||||| ||||||||||||||| Sbjct: 139552 actgcaaacaaggagagaactgaa 139529
>gb|AF038458.1|AF038458 Homo sapiens chromosome 19, cosmids R31158, R31874, and R28125, complete sequence Length = 92797 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 gaagggaggagaagagtgga 412 |||||||||||||||||||| Sbjct: 64032 gaagggaggagaagagtgga 64013
>ref|XM_234415.3| PREDICTED: Rattus norvegicus similar to mKIAA0317 protein (predicted) (LOC299197), mRNA Length = 2873 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 acaggccacttgagcatgtg 365 |||||||||||||||||||| Sbjct: 2767 acaggccacttgagcatgtg 2786
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaaaaggagagaactgaag 230 |||||||||||||||||||| Sbjct: 6980 aaaaaaggagagaactgaag 6961
>emb|BX544883.7| Mouse DNA sequence from clone RP23-302B23 on chromosome X, complete sequence Length = 133236 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctccaggtttttatgataca 335 |||||||||||||||||||| Sbjct: 115248 ctccaggtttttatgataca 115229
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaaaaggagagaactgaag 230 |||||||||||||||||||| Sbjct: 153453 aaaaaaggagagaactgaag 153434
>gb|AF025516.1| Eriostemon myoporoides chloroplast trnL-trnF intergenic spacer region sequence Length = 359 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 ataatgccgagatcccttttgaaa 306 |||||||| ||||||||||||||| Sbjct: 109 ataatgcccagatcccttttgaaa 86
>gb|AF025515.1| Diplolaena microcephala chloroplast trnL-trnF intergenic spacer region sequence Length = 359 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 ataatgccgagatcccttttgaaa 306 |||||||| ||||||||||||||| Sbjct: 110 ataatgcccagatcccttttgaaa 87
>gb|AC151533.3| Mus musculus BAC clone RP24-92D11 from 14, complete sequence Length = 230285 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gctttctgaggcaagggcac 126 |||||||||||||||||||| Sbjct: 193975 gctttctgaggcaagggcac 193994
>gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, complete sequence Length = 212309 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 gtagaggctcaattaagaaagcaa 437 |||||| ||||||||||||||||| Sbjct: 126197 gtagagtctcaattaagaaagcaa 126220
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggaaggcaagagagaaacag 179 |||||||||||||||||||| Sbjct: 139418 ggaaggcaagagagaaacag 139399
>gb|AF035823.1|AF035823 Mus musculus 29-kDa Golgi SNARE (Vti1-rp2) mRNA, complete cds Length = 753 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 223 gagaaacagcttgaagaggc 242
>gb|AF035209.1|AF035209 Mus musculus putative v-SNARE Vti1a mRNA, complete cds Length = 827 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gagaaacagcttgaagaggc 190 |||||||||||||||||||| Sbjct: 225 gagaaacagcttgaagaggc 244
>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence Length = 151468 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 gaggagcttgaagggaggag 403 |||||||||||||||||||| Sbjct: 34574 gaggagcttgaagggaggag 34593
>ref|XM_674915.1| Plasmodium berghei strain ANKA Myb2 protein (PB001418.02.0), partial mRNA Length = 2706 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 208 tgcaaaaaaggagagaactgaaggcagctggtattg 243 ||||||||| |||||||| || ||||||||||||| Sbjct: 545 tgcaaaaaaaaagagaactaaaagcagctggtattg 580
>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence Length = 241799 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gctttctgaggcaagggcac 126 |||||||||||||||||||| Sbjct: 43125 gctttctgaggcaagggcac 43144
>emb|AL845162.9| Mouse DNA sequence from clone RP23-35I8 on chromosome 2, complete sequence Length = 189829 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gagagaaacagcttgaagag 188 |||||||||||||||||||| Sbjct: 82215 gagagaaacagcttgaagag 82234 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,230,599 Number of Sequences: 3902068 Number of extensions: 5230599 Number of successful extensions: 104312 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 104047 Number of HSP's gapped (non-prelim): 266 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)