ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl38a10 |
|---|---|
| Clone Library Name | barley_pub |
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 35.4 bits (80), Expect = 0.073 Identities = 21/69 (30%), Positives = 28/69 (40%) Frame = -2 Query: 332 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRS 153 H CF DPS T +H PPP + AP SP + R P +R+ Sbjct: 3597 HSACFPDPST-ASTSQSAAHSNDSPPP--------PSAAPSSSASPHASRKSWPPVGSRA 3647 Query: 152 HSLRGPSSP 126 + + PS P Sbjct: 3648 SAAKPPSFP 3656
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 33.1 bits (74), Expect = 0.36 Identities = 22/69 (31%), Positives = 28/69 (40%) Frame = -2 Query: 332 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRS 153 H CF DPS T +H PP P S AP SP + R P +R+ Sbjct: 3574 HSACFPDPST-ASTSQSAAHSNDSPP-------PPSAAAPSSA-SPHASRKSWPQVVSRA 3624 Query: 152 HSLRGPSSP 126 + + PS P Sbjct: 3625 SAAKPPSFP 3633
>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 539 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -2 Query: 248 HNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPE 123 H++ L R G G H P +GR P+A N +H P +PE Sbjct: 62 HSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHR---PQNPE 100
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -3 Query: 202 IRRDPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPA 41 ++RDPAE+ A +RA + + EA EA P VR+EPA Sbjct: 95 VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -3 Query: 202 IRRDPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPA 41 ++RDPAE+ A +RA + + EA EA P VR+EPA Sbjct: 95 VKRDPAEL------------AAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPA 136
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/47 (38%), Positives = 21/47 (44%) Frame = +2 Query: 101 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQ 241 SG F+GP S G G R G D G +S R G GAG+ Sbjct: 282 SGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGE 328
>CD2_MOUSE (P08920) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Lymphocyte antigen Ly-37) Length = 344 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -2 Query: 260 PPPRHNVDLPRSTGAPRGGHSPRSGRDRR--PSAANRSHSLRGPSSPEPGQQ 111 PPP H++ P P GH R + ++ P + + H +GP P P Q Sbjct: 277 PPPGHHLQTPGHRPLP-PGHRTREHQQKKRPPPSGTQIHQQKGPPLPRPRVQ 327
>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/99 (26%), Positives = 40/99 (40%) Frame = -2 Query: 419 PIGSEVPPENRGALGRPTVNQVAVGRLEIHCLCFADPSR*PETQDRQSHHMQLPPPRHNV 240 P+ PP A+ +PT+ + P E ++Q+ H + PP +V Sbjct: 1225 PLLPRRPPPRVPAIKKPTLRRTG------------KPLSPEEQFEQQTVHFTIGPPETSV 1272 Query: 239 DLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPE 123 + P APR P+ R +P A S R P+S E Sbjct: 1273 EAPPVVTAPRVPPVPKP-RTFQPGKAAERPSHRKPASDE 1310
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = -2 Query: 263 LPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 117 LPPP + P P G P G P +R H + GP+ P PG Sbjct: 220 LPPPSVSATGP----GPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPG 264
>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)| Length = 572 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/69 (30%), Positives = 28/69 (40%) Frame = -2 Query: 419 PIGSEVPPENRGALGRPTVNQVAVGRLEIHCLCFADPSR*PETQDRQSHHMQLPPPRHNV 240 P GS P + LG P G + +A P Q++Q +PPP N Sbjct: 285 PGGSGSQPNQK--LGHPEALSAGTGSPQPPSFTYAQQREKPRVQEKQH---PVPPPAQNQ 339 Query: 239 DLPRSTGAP 213 + RS GAP Sbjct: 340 NQVRSPGAP 348
>PTHB1_MOUSE (Q811G0) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein homolog) Length = 885 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -3 Query: 334 STVCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAA 206 + V + P D I +V C F LP+ ++ PG P + A+ Sbjct: 502 NAVVSYSRPTDRNPDGIPRVVQCKFRLPLKLICLPGQPSKTAS 544
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -2 Query: 260 PPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 117 P PR P G PR SP+ R R PS S + P SP+ G Sbjct: 431 PQPR-----PPPQGGPRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSG 473
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -2 Query: 260 PPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 117 P PR P G PR SP+ R R PS S + P SP+ G Sbjct: 431 PQPR-----PPPQGGPRQAQSPQPPRSRSPSQQRLSPQGQQPVSPQSG 473
>IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffuse early| antigen) Length = 438 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = -2 Query: 293 TQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHS 147 T + LPP PR+ PR SPR+ R R + RS S Sbjct: 96 TDESYGKRRHLPPGARAPRAPRAPRVPRAPRSPRAPRSNRATRGPRSES 144
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 11/79 (13%) Frame = -3 Query: 229 GPPERPAAGIRR-----------DPAEIDXXXXXXXXXASGVRAAPSRASKCSGEAPQEE 83 GP PA G RR +P D G R C ++ Sbjct: 2172 GPEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTTLRRRTPSCEATPHRDS 2231 Query: 82 AEPTTVTAVRSEPARKGGR 26 EPT + +PA KG R Sbjct: 2232 LEPTEGSGAGGDPAAKGER 2250
>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 7) Length = 549 Score = 30.0 bits (66), Expect = 3.1 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Frame = -3 Query: 316 QTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAAGIRRDPAEIDXXXXXXXXXASGV 137 ++P D +H + + P+ L PG ERP + P+ + V Sbjct: 401 RSPGHDPEHVEVRRQSSD---PLFQLPPPGRGERPPGATGQPPS-------APSGVKTQV 450 Query: 136 RA-APSRASKCSGEAPQEEAEPTTVTAVRSEPARKGG 29 RA APS S Q EA+ +RS+PAR GG Sbjct: 451 RAMAPSLTS-------QAEAQAANQALIRSDPARGGG 480
>PTHB1_HUMAN (Q3SYG4) Protein PTHB1 (Parathyroid hormone-responsive B1 gene| protein) (Bardet-Biedl syndrome 9 protein) Length = 887 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = -3 Query: 334 STVCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPPERPAA 206 + V + P D I +V C F LP+ ++ PG P + A+ Sbjct: 503 NAVVSYSRPTDRNPDGIPRVIQCKFRLPLKLICLPGQPSKTAS 545
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/66 (30%), Positives = 26/66 (39%) Frame = -2 Query: 311 PSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPS 132 P P+ +Q H PPP R G P+ G PR R R + +GP Sbjct: 87 PQGKPQGPPQQGGH---PPPPQG----RPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPP 139 Query: 131 SPEPGQ 114 P PG+ Sbjct: 140 PPPPGK 145
>VCY1_HUMAN (O14598) Testis-specific basic protein Y 1 (Variably charged| protein Y) Length = 125 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = -2 Query: 311 PSR*PETQDRQSHHMQLP--PPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRG 138 P++ ET R+S P P + + A RGG + G + +A + G Sbjct: 11 PAKAKETGKRKSSSQPSPSGPKKKTTKVAEKGEAVRGGRRGKKGAATKMAAVTAPEAESG 70 Query: 137 PSSPEPGQQ 111 P++P P Q Sbjct: 71 PAAPGPSDQ 79
>ENGA_BORPE (Q7VWL4) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 Query: 332 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 195 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>ENGA_BORPA (Q7W6Q0) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 Query: 332 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 195 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>ENGA_BORBR (Q7WHN4) GTP-binding protein engA| Length = 451 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -2 Query: 332 HCLCFADPSR*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSP 195 H FA S T++ Q+ Q PPPR + P+ A +GG +P Sbjct: 355 HAAAFAKLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNP 400
>MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS)| (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 560 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = -3 Query: 238 TCPGPPERPAAGIRRDPAEIDXXXXXXXXXASGVRAAPSRAS 113 T P PP RP+A + P D +R P+RAS Sbjct: 268 TVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARAS 309
>Y525_PSEAE (Q51484) Hypothetical protein PA0525| Length = 612 Score = 26.2 bits (56), Expect(2) = 4.0 Identities = 24/71 (33%), Positives = 32/71 (45%) Frame = +1 Query: 16 ATFISPLSLPARSGRR*RWWALPLLEALLRSICWPGSGLLGPRRLWERLAAEGRRSRPDL 195 A PL A+ +R WA LL+A +P L PR + RL A R RP L Sbjct: 117 AASAGPLRHWAQDNQR---WARQLLDA------YPA---LRPR--YARLVAAHLRQRPSL 162 Query: 196 GECPPRGAPVD 228 +CP A ++ Sbjct: 163 DDCPAADAELE 173 Score = 21.9 bits (45), Expect(2) = 4.0 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +2 Query: 221 RWTGAGQHYDGEEEAA 268 RWT + DGEE AA Sbjct: 208 RWTPSASAEDGEEAAA 223
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 25.0 bits (53), Expect(2) = 4.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 142 GVRAAPSRASKCSGEAPQEEAEPTTVTAVRSEPARKGGR 26 G AAP+ A++ P A+P R AR GGR Sbjct: 849 GAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGR 887 Score = 22.7 bits (47), Expect(2) = 4.9 Identities = 13/34 (38%), Positives = 13/34 (38%) Frame = -2 Query: 218 APRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 117 APR P R RRP RG P PG Sbjct: 820 APR----PAEKRSRRPRGPGPGPGRRGGGGPAPG 849
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 8/58 (13%) Frame = -2 Query: 260 PPPRHNVDLPRSTG----APRG----GHSPRSGRDRRPSAANRSHSLRGPSSPEPGQQ 111 PPPR PR AP G +P + DRR AA R S R P++ PG+Q Sbjct: 283 PPPRRTPGTPRPAAARARAPAGCSPARRTPSAPTDRRCRAARRG-SPRPPAARPPGRQ 339
>SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 605 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/36 (44%), Positives = 16/36 (44%) Frame = +1 Query: 88 LEALLRSICWPGSGLLGPRRLWERLAAEGRRSRPDL 195 LEAL C P LG RRLWE R DL Sbjct: 457 LEALHHPFCAPNQSDLGQRRLWETNLPTARAQAYDL 492
>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)| Length = 388 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -2 Query: 230 RSTGAPRGGH---SPRSGRDRRPSAANRSHSLRGP 135 R+ G RGGH PR G DRR A H +R P Sbjct: 95 RAAGLGRGGHRRPGPRRGVDRRRRPAAGKHPVRRP 129
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 29.3 bits (64), Expect = 5.2 Identities = 32/117 (27%), Positives = 47/117 (40%) Frame = -2 Query: 467 GCRQGYLGGGHGHRRCPIGSEVPPENRGALGRPTVNQVAVGRLEIHCLCFADPSR*PETQ 288 G R G+ G GHG VP + +G+ P + + +E+ P P Sbjct: 2472 GFRFGFPGAGHGPMPSQDRFHVPQQIQGSGIPPHIRRPM--SMEMPRPSNNPPLNNPVGL 2529 Query: 287 DRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPG 117 + LP +HN+ L ++ R H GR R P AA+ S + PS P G Sbjct: 2530 PQHFPPQGLPVQQHNI-LGQAFIELR--HRAPDGRSRLPFAASPSSVIESPSHPRHG 2583
>CAD22_RAT (Q63315) Cadherin-22 precursor (Pituitary and brain cadherin)| (PB-cadherin) Length = 813 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -2 Query: 206 GHSPRSGRDRRPSAANRS--HSL-RGPSSPEP 120 G P G P AA+ S HSL RGPSSPEP Sbjct: 696 GGDPGGGAASPPQAASSSERHSLPRGPSSPEP 727
>CAD22_MOUSE (Q9WTP5) Cadherin-22 precursor (Pituitary and brain cadherin)| (PB-cadherin) Length = 813 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -2 Query: 206 GHSPRSGRDRRPSAANRS--HSL-RGPSSPEP 120 G P G P AA+ S HSL RGPSSPEP Sbjct: 696 GGDPGGGAASPPQAASSSERHSLPRGPSSPEP 727
>ONEC_DROME (Q9NJB5) Homeobox protein onecut| Length = 1081 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 328 VCALQTPADDQKHKIAKVTTCSFLLPVIMLTCPGPP 221 +C ADD KH A V + + +PV++ P PP Sbjct: 621 ICPADWKADDWKHSNAGVVSLTADMPVVVSLTPTPP 656
>RNB_HHV11 (P04487) RNA-binding protein (Vmw21)| Length = 161 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -2 Query: 266 QLPPPRHNVDLPRSTGAPRGGHSPRSGRD-RRPSAANRSHSLRGPSSP 126 ++P P PR APR PR RD R+P + S R P SP Sbjct: 95 RVPRPPREPREPRVPRAPRDPRVPRDPRDPRQPRSPREPRSPREPRSP 142
>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding| protein MBD6) Length = 1003 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Frame = -2 Query: 281 QSHHMQLPPPRHNVDLPRSTGAPRGGHS----PRSGRDRRPSAANRSHSLRGPSSP 126 ++ H LPPP AP HS P R RRP R RGP +P Sbjct: 329 KAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQTP 384
>YS88_CAEEL (Q09384) Hypothetical protein ZK945.8| Length = 109 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Frame = -2 Query: 377 GRPTVNQVAVGRLEIHCLCFADPSR---*PETQDRQSHHMQLPPPRHNVDLPRSTGAPRG 207 G ++ +GRL+ +C C P R P T + + H + LP P+G Sbjct: 35 GAGVIDNEHMGRLKSNCCCIYTPPRVWDDPSTWEPEEHETE---HCRGHTLPEKKQKPQG 91 Query: 206 GHSPRSGRDR 177 GH D+ Sbjct: 92 GHGSDKDEDK 101
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -2 Query: 278 SHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQQML 105 S+H+ L PP+ RS+ +PR G + G +R PS LRG + P +L Sbjct: 291 SYHLALQPPQSRPSGSRSSDSPRLGR--KGGHERPPSP-----GLRGLLTDSPAATVL 341
>YRR2_CAEEL (Q09345) Hypothetical protein R144.2| Length = 823 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/43 (39%), Positives = 18/43 (41%) Frame = -2 Query: 299 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRP 171 P Q Q HH QLPPP P G RG H +D P Sbjct: 343 PPFQHPQQHHPQLPPP------PVHQGMGRGYHHNSPPQDPAP 379
>PTC1_MOUSE (Q61115) Protein patched homolog 1 (PTC1) (PTC)| Length = 1434 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Frame = -2 Query: 284 RQSHHMQLPPPRHNVDLPRSTGAPRG--------GHSPRSGRDRRPSAANRSHSLRGPSS 129 RQ + PPR + P PR GHS S RDR RSH+ R P+S Sbjct: 1283 RQGQQPRRDPPREGLRPPPYR--PRRDAFEISTEGHSGPSNRDRSGPRGARSHNPRNPTS 1340 Query: 128 PEPGQQM 108 G + Sbjct: 1341 TAMGSSV 1347
>ANMX_CRILO (Q99MI9) Protein arginine N-methyltransferase (EC 2.1.1.-)| Length = 729 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 197 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 292 AN G+L W +HYD +E A + D++ Sbjct: 45 ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 76
>TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Protein NYD-SP30)| Length = 887 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 14/64 (21%) Frame = -2 Query: 278 SHHMQLPPP---RHNVDLPRSTGAPRGGHSPRSGRDR-----------RPSAANRSHSLR 141 +H+ + P R +V PRS A SP SG R RP++A+RSHSL Sbjct: 587 NHYKLIQQPSSIRRSVSCPRSISA----QSPSSGDTRPFSAQQMISVSRPTSASRSHSLN 642 Query: 140 GPSS 129 SS Sbjct: 643 RASS 646
>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) Length = 1511 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = -2 Query: 260 PPPRHNVDL--PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEP 120 PP + D P++ + SP GRD P + S SLR SP P Sbjct: 296 PPKAYREDKSEPKAYRRRQRSLSPLGGRDESPVSHRASQSLRSRKSPSP 344
>ANM7_MOUSE (Q922X9) Protein arginine N-methyltransferase 7 (EC 2.1.1.-)| Length = 692 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +2 Query: 197 ANARRGALRWTGAGQHYDGEEEAACGDFGDLV 292 AN G+L W +HYD +E A + D++ Sbjct: 8 ANPTTGSLEWLEEDEHYDYHQEIARSSYADML 39
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Frame = -2 Query: 299 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGH-----SPRSGRDRRPSAANRSHSLR 141 P Q SHH QLP P++ P+S P+ H PR G + PS+++ + L+ Sbjct: 843 PGPQPLFSHHPQLPQPQY----PQSGPYPQPPHGYLSTEPRLGLNFNPSSSHSTGQLK 896
>DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 656 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/53 (39%), Positives = 23/53 (43%) Frame = +2 Query: 101 SGAFAGPARGCSDPGGCGSGWRRRGVDLGRISANARRGALRWTGAGQHYDGEE 259 +GA AG A G G G G G +G GA GAGQ DGEE Sbjct: 588 AGAGAGAAGGMGGAGPGGMGGAGPG-GMGGAGPGGMGGAGPGAGAGQQGDGEE 639
>WDR46_CANFA (Q5TJE7) WD-repeat protein 46| Length = 612 Score = 26.2 bits (56), Expect(2) = 8.4 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = -2 Query: 299 PETQDRQSHHMQLPPPR-HNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPE 123 P + + +L P R N++LP+ + P P+ R++R R +L G P Sbjct: 42 PGPPRNKKRNRELRPQRPKNINLPKKSRIPGKPQFPKKPREQRNLEPQR--NLSGAQDPF 99 Query: 122 PG 117 PG Sbjct: 100 PG 101 Score = 20.8 bits (42), Expect(2) = 8.4 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 Query: 141 GSEQPRAGPANAPEKRLKK 85 G++ P GPA PE+ +K Sbjct: 94 GAQDPFPGPAPIPEEVARK 112
>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (ACAMP-81) Length = 331 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -3 Query: 226 PPERPAAGIRRDPAEIDXXXXXXXXXASGVRAAPSRASKC--SGEAPQEEAEPTTVTAVR 53 PP A +P++ + A+G A + C +G AP+EEA P ++ Sbjct: 250 PPASEEAKAVEEPSKAEEKAEEAGVSAAGCEAPSAAGPGCPRAGGAPREEAAPPRASSAC 309 Query: 52 SEPARK 35 S P+++ Sbjct: 310 SAPSQE 315
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = -2 Query: 233 PRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPS--SPEPG 117 PR G R G++PR G RP GP+ +P PG Sbjct: 188 PRPGGGNRSGNAPRPGGGPRPGGNRPQGGQGGPAERAPRPG 228
>ETV5_HUMAN (P41161) ETS translocation variant 5 (Ets-related protein ERM)| Length = 510 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/63 (34%), Positives = 28/63 (44%) Frame = -2 Query: 299 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPSSPEP 120 P T +H L PP P++T P GH+P +G + A HSL PEP Sbjct: 137 PTTPLSPTHQNPLFPP------PQAT-LPTSGHAPAAGPVQGVGPAPAPHSL-----PEP 184 Query: 119 GQQ 111 G Q Sbjct: 185 GPQ 187
>DNAE2_RHILO (Q98E34) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1118 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 82 PLLEALLRSICWPGSGLLGPRRL-WERLAAEGRRSRPDLGECPPR 213 P L LL + G+G GP+ + + + RRSRP++G P R Sbjct: 1055 PWLTVLLEKVS--GAGAPGPQPMGYAKEVGSDRRSRPEIGNAPAR 1097
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Frame = -2 Query: 221 GAPRGGHSPRSGRDRRPSAANRSHSLR----GPSSPEPG 117 G PR G PR G RP RS + R GP PG Sbjct: 206 GGPRPGGGPRPGGAPRPQGGQRSGAPRDGQGGPRGQRPG 244
>ANKY1_HUMAN (Q9P2S6) Ankyrin repeat and MYND domain-containing protein 1| (Testis-specific ankyrin-like protein 1) (Zinc-finger MYND domain protein 13) Length = 941 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -2 Query: 266 QLPPPRHNVDLPRSTGAPRGGHSPRSGRDRRPSAANRSHSLRGPS 132 +L PP + LPR +G+ GGH +G+ S +RS SL+G S Sbjct: 392 ELRPPPAPLLLPRVSGSHEGGHFQDTGQ-CGGSIDHRSSSLKGDS 435
>TM16B_HUMAN (Q9NQ90) Transmembrane protein 16B| Length = 999 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 9/51 (17%) Frame = -2 Query: 239 DLPRSTGAPR---------GGHSPRSGRDRRPSAANRSHSLRGPSSPEPGQ 114 D+P G+PR GG P+ G+ R+ L+G S+ +PGQ Sbjct: 4 DIPLLPGSPRRLSPQAGSRGGQGPKHGQQCLKMPGPRAPGLQGGSNRDPGQ 54
>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A| (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and leucine-rich repeat protein 11) Length = 1146 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 299 PETQDRQSHHMQLPPPRHNVDLPRSTGAPRGGHSPRSGRDRR 174 P+ Q + H M+ P RH+ PR++G P G + R RR Sbjct: 549 PKIQFTKPHTMR-PASRHSTAPPRTSGTPSGTTASSGARRRR 589 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,193,638 Number of Sequences: 219361 Number of extensions: 1700833 Number of successful extensions: 6811 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 5945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6742 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
