Clone Name | bastl38a05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TSP4_RAT (P49744) Thrombospondin-4 precursor | 30 | 2.7 | 2 | TSP4_MOUSE (Q9Z1T2) Thrombospondin-4 precursor | 30 | 2.7 |
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>TSP4_RAT (P49744) Thrombospondin-4 precursor| Length = 980 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +2 Query: 185 CGPTMASTPPPRDLARLDPAAPPTR 259 CGP +P P L + P APPTR Sbjct: 279 CGPLSFQSPTPNTLVPIAPPAPPTR 303
>TSP4_MOUSE (Q9Z1T2) Thrombospondin-4 precursor| Length = 963 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +2 Query: 185 CGPTMASTPPPRDLARLDPAAPPTR 259 CGP +P P L + P APPTR Sbjct: 263 CGPLSFQSPTPNTLVPIAPPAPPTR 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,253,278 Number of Sequences: 219361 Number of extensions: 537337 Number of successful extensions: 2268 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2268 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)