ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl38a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 40 0.002
2BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 40 0.004
3BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 38 0.012
4RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 38 0.016
5BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 37 0.035
6BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 35 0.078
7TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 32 1.1
8EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 31 1.5
9DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 30 4.3
10CHIT_SACER (P14529) Chitinase (EC 3.2.1.14) 29 5.6
11ENV_FIVU1 (Q03804) Env polyprotein (GP150 polyprotein) [Contains... 29 7.3
12INHA_BOVIN (P07994) Inhibin alpha chain precursor 29 7.3
13ENV_FIVWO (Q05312) Env polyprotein (GP150 polyprotein) [Contains... 28 9.6
14ENV_FIVU2 (Q04993) Env polyprotein (GP150 polyprotein) [Contains... 28 9.6
15ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adreno... 28 9.6
16ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 9.6

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +2

Query: 317 ASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           A  L++DG  L++  R  T+ P     SW+ SD +PC W GV C+
Sbjct: 21  AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECD 65



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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMAFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C+ +L + +  RGR     D  D  LL AF++ ++ +DP   LG+W Y S   PC W
Sbjct: 8   LILCLLVLFLTVDSRGRRLLSDDVNDTALLTAFKQTSIKSDPTNFLGNWRYGSGRDPCTW 67

Query: 434 NGVICN 451
            GV C+
Sbjct: 68  RGVSCS 73



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
 Frame = +2

Query: 266 MVKCVFLLVV---LALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWN 436
           M+ C F L++   L LR  G    +A+G+ L A + ++ ADP   L SW  +  +PC W 
Sbjct: 6   MIPCFFWLILVLDLVLRVSG----NAEGDALSALKNSL-ADPNKVLQSWDATLVTPCTWF 60

Query: 437 GVICN 451
            V CN
Sbjct: 61  HVTCN 65



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 266 MVKCVFLLVVLALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDD-SPCDWNGV 442
           M+ C+ LL+ L+     +  L+ D  +L   +  ++ DP  +L SWS ++D +PC W GV
Sbjct: 1   MLYCLILLLCLSSTYLPSLSLNQDATILRQAKLGLS-DPAQSLSSWSDNNDVTPCKWLGV 59

Query: 443 ICN 451
            C+
Sbjct: 60  SCD 62



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 36.6 bits (83), Expect = 0.035
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMAFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C F   +V+ + G+     D  +  LL+AF++ +V +DP   LG+W Y S    C W
Sbjct: 9   LILCFFTTSLVMGIHGKHLINDDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSW 68

Query: 434 NGVICN 451
            GV C+
Sbjct: 69  RGVSCS 74



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +2

Query: 269 VKCVFLLVVLALRGRG-ASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVI 445
           +  +FLL  L+       S L  D   L++F+  +  DP   L +WS    SPC ++GV 
Sbjct: 16  ISFIFLLTHLSQSSSSDQSSLKTDSLSLLSFKTMIQDDPNNILSNWS-PRKSPCQFSGVT 74

Query: 446 CNG 454
           C G
Sbjct: 75  CLG 77



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 320 SGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICNG 454
           S  D+DG+L        + +P  + G   +SD  PC W  ++C G
Sbjct: 21  SKADSDGDLSAMLSLKKSLNPPSSFG---WSDPDPCKWTHIVCTG 62



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 278 VFLLVVLALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDD-SPCDWNGVIC 448
           +FL +  +        L ++   L++F+R++    L  L SW+ S   S CDW GV C
Sbjct: 7   LFLFLFFSFSSSAIVDLSSETTSLISFKRSLENPSL--LSSWNVSSSASHCDWVGVTC 62



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = +2

Query: 260 TEMVKCVFLLVVLALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWNG 439
           + ++  VF+ V+  +R         D   L AF+ +++   LG   +WS + D   +W G
Sbjct: 10  SSLLAVVFISVISVVRCCSPK----DQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYG 65

Query: 440 VICN 451
           + C+
Sbjct: 66  ISCD 69



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>CHIT_SACER (P14529) Chitinase (EC 3.2.1.14)|
          Length = 290

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = +2

Query: 293 VLALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICNGFPQR 466
           + ++ G+  +G   D               LG L  WS + D PCD     C G  Q+
Sbjct: 221 ISSMNGKSDTGETVDQAAFQKMADYAGEKGLGRLSFWSVNRDRPCDGAPDACGGIDQQ 278



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>ENV_FIVU1 (Q03804) Env polyprotein (GP150 polyprotein) [Contains: Major|
           glycoprotein GP100; Glycoprotein GP36]
          Length = 856

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 341 ELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           +L+M F      +     G+WS   D P +W  + CN
Sbjct: 512 DLIMHFNMTKAVEMYNIAGNWSCMSDLPTEWGYMNCN 548



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>INHA_BOVIN (P07994) Inhibin alpha chain precursor|
          Length = 360

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 278 VFLLVVLALRGRGASGLDADGELLMAFRRAVTADPLG 388
           + LL++    G G  GL+ D EL++A  RA+  D LG
Sbjct: 5   LLLLLLAPQGGHGCHGLELDRELVLAKVRALFLDALG 41



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>ENV_FIVWO (Q05312) Env polyprotein (GP150 polyprotein) [Contains: Major|
           glycoprotein GP100; Glycoprotein GP36]
          Length = 854

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 341 ELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           +L+M F +    +     G+WS   D P  W  + CN
Sbjct: 510 DLIMHFNKTKAVEMYNIAGNWSCKSDLPPTWGYMNCN 546



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>ENV_FIVU2 (Q04993) Env polyprotein (GP150 polyprotein) [Contains: Major|
           glycoprotein GP100; Glycoprotein GP36]
          Length = 855

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 341 ELLMAFRRAVTADPLGALGSWSYSDDSPCDWNGVICN 451
           +L+M F      +     G+WS + D P  W  + CN
Sbjct: 512 DLIMHFNMTKAVEMYNIAGNWSCTSDLPSTWGYMNCN 548



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>ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 358 AFMRILGCQCRGGRRRRRR 376



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>ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 514

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 357 AFMRILGCQCRGGRRRRRR 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,983,287
Number of Sequences: 219361
Number of extensions: 604026
Number of successful extensions: 1766
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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