ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
2dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
3ref|XM_478402.1| Oryza sativa (japonica cultivar-group), mRNA 206 4e-50
4ref|XM_543458.2| PREDICTED: Canis familiaris similar to tyrosylp... 46 0.080
5gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.31
6gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 1.2
7gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.2
8ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase ... 42 1.2
9gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2,... 42 1.2
10gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome... 42 1.2
11emb|CR681868.2|CNS0FP2W Tetraodon nigroviridis full-length cDNA 42 1.2
12gb|AE014075.1| Escherichia coli CFT073, complete genome 42 1.2
13gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.2
14gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 1.2
15dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 1.2
16dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.2
17dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 42 1.2
18dbj|AK149379.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 42 1.2
19gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, compl... 42 1.2
20dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.2
21dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-le... 42 1.2
22dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 42 1.2
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
24gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 1.2
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.2
26dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
27gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the... 42 1.2
28dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
29gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 42 1.2
30gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransfer... 42 1.2
31gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complet... 42 1.2
32gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 1.2
33dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 1.2
34gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.2
35gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, comp... 40 4.9
36gb|AC170171.3| Mus musculus chromosome 1, clone wi1-1827P13, com... 40 4.9
37gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 4.9
38ref|XM_523348.1| PREDICTED: Pan troglodytes similar to Cardiotro... 40 4.9
39ref|XM_519997.1| PREDICTED: Pan troglodytes LOC464442 (LOC464442... 40 4.9
40gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 4.9
41ref|NM_001330.2| Homo sapiens cardiotrophin 1 (CTF1), mRNA 40 4.9
42gb|AC167464.3| Mus musculus chromosome 1, clone wi1-1027B15, com... 40 4.9
43gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, com... 40 4.9
44gb|BC049822.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone IM... 40 4.9
45gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, com... 40 4.9
46emb|CR679798.2|CNS0FNHE Tetraodon nigroviridis full-length cDNA 40 4.9
47gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.9
48emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 4.9
49emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 4.9
50dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 4.9
51gb|AE005697.1| Caulobacter crescentus CB15 section 23 of 359 of ... 40 4.9
52gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold 40 4.9
53dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.9
54gb|U43030.1|HSU43030 Homo sapiens cardiotrophin-1 (CTF1) mRNA, c... 40 4.9
55gb|AC099494.3| Homo sapiens chromosome 16 clone RP11-1102P22, co... 40 4.9
56dbj|AB168595.1| Macaca fascicularis testis cDNA clone: QtsA-1331... 40 4.9
57gb|AC173548.3| Mus musculus chromosome 1, clone wi1-303A11, comp... 40 4.9
58ref|XM_392186.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 4.9
59gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.9
60gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene... 40 4.9
61dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.9
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.9
63dbj|AK111285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
64gb|BC036787.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone MG... 40 4.9
65gb|U43033.1|HSCTONE03 Human cardiotrophin-1 (CTF1) gene, exon 3 ... 40 4.9
66gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.9
67gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, com... 40 4.9
68gb|BC064416.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone MG... 40 4.9 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  210 bits (106), Expect = 2e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                            
Query: 31       ccatggacttcgctcgccgaaaagcggcggcgctggccgcgctctcctcgccggcgccgg 90
                ||||||| |||| |||||| || ||||||||||||||||||||| | |||||||||||||
Sbjct: 19708839 ccatggagttcgatcgccggaaggcggcggcgctggccgcgctcgcgtcgccggcgccgg 19708898

                                                                            
Query: 91       acaagtcaccgaaaggcggcgtagacgcccccatcgcccctctcctcgacgcgctgaact 150
                ||||||| ||||| |||||||| ||||| |||||||| || ||||||||||| |||||||
Sbjct: 19708899 acaagtcgccgaagggcggcgtcgacgcgcccatcgcgccgctcctcgacgccctgaact 19708958

                                                                          
Query: 151      cccacgcggatctcttcaccacgtcctcctgctccggccgcatctcagtcctcgcgca 208
                ||||| |||| ||||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 19708959 cccacccggacctcttcaccacctcctcctgctccggccgcgtctccgtcctcgcgca 19709016



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 75/85 (88%)
 Strand = Plus / Plus

                                                                            
Query: 246      aagaagaaggcccggggcggcgggtggttgtacatctcgcacgaccccgctgacccggac 305
                ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||| 
Sbjct: 19709060 aagaagaaggcgcggggcggcgggtgggtgtacatctcccacgaccccgcggacccggag 19709119

                                         
Query: 306      gcagttgtggagctcctgttcggtg 330
                ||  | |||||| | ||||||||||
Sbjct: 19709120 gccctggtggaggtgctgttcggtg 19709144
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>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0048D08
          Length = 145772

 Score =  210 bits (106), Expect = 2e-51
 Identities = 160/178 (89%)
 Strand = Plus / Plus

                                                                         
Query: 31    ccatggacttcgctcgccgaaaagcggcggcgctggccgcgctctcctcgccggcgccgg 90
             ||||||| |||| |||||| || ||||||||||||||||||||| | |||||||||||||
Sbjct: 40845 ccatggagttcgatcgccggaaggcggcggcgctggccgcgctcgcgtcgccggcgccgg 40904

                                                                         
Query: 91    acaagtcaccgaaaggcggcgtagacgcccccatcgcccctctcctcgacgcgctgaact 150
             ||||||| ||||| |||||||| ||||| |||||||| || ||||||||||| |||||||
Sbjct: 40905 acaagtcgccgaagggcggcgtcgacgcgcccatcgcgccgctcctcgacgccctgaact 40964

                                                                       
Query: 151   cccacgcggatctcttcaccacgtcctcctgctccggccgcatctcagtcctcgcgca 208
             ||||| |||| ||||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 40965 cccacccggacctcttcaccacctcctcctgctccggccgcgtctccgtcctcgcgca 41022



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 75/85 (88%)
 Strand = Plus / Plus

                                                                         
Query: 246   aagaagaaggcccggggcggcgggtggttgtacatctcgcacgaccccgctgacccggac 305
             ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||| 
Sbjct: 41066 aagaagaaggcgcggggcggcgggtgggtgtacatctcccacgaccccgcggacccggag 41125

                                      
Query: 306   gcagttgtggagctcctgttcggtg 330
             ||  | |||||| | ||||||||||
Sbjct: 41126 gccctggtggaggtgctgttcggtg 41150
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>ref|XM_478402.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3132

 Score =  206 bits (104), Expect = 4e-50
 Identities = 158/176 (89%)
 Strand = Plus / Plus

                                                                       
Query: 33  atggacttcgctcgccgaaaagcggcggcgctggccgcgctctcctcgccggcgccggac 92
           ||||| |||| |||||| || ||||||||||||||||||||| | |||||||||||||||
Sbjct: 1   atggagttcgatcgccggaaggcggcggcgctggccgcgctcgcgtcgccggcgccggac 60

                                                                       
Query: 93  aagtcaccgaaaggcggcgtagacgcccccatcgcccctctcctcgacgcgctgaactcc 152
           ||||| ||||| |||||||| ||||| |||||||| || ||||||||||| |||||||||
Sbjct: 61  aagtcgccgaagggcggcgtcgacgcgcccatcgcgccgctcctcgacgccctgaactcc 120

                                                                   
Query: 153 cacgcggatctcttcaccacgtcctcctgctccggccgcatctcagtcctcgcgca 208
           ||| |||| ||||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 121 cacccggacctcttcaccacctcctcctgctccggccgcgtctccgtcctcgcgca 176



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 75/85 (88%)
 Strand = Plus / Plus

                                                                       
Query: 246 aagaagaaggcccggggcggcgggtggttgtacatctcgcacgaccccgctgacccggac 305
           ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||| 
Sbjct: 220 aagaagaaggcgcggggcggcgggtgggtgtacatctcccacgaccccgcggacccggag 279

                                    
Query: 306 gcagttgtggagctcctgttcggtg 330
           ||  | |||||| | ||||||||||
Sbjct: 280 gccctggtggaggtgctgttcggtg 304
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>ref|XM_543458.2| PREDICTED: Canis familiaris similar to tyrosylprotein
           sulfotransferase 2 (LOC486332), mRNA
          Length = 1819

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 167 caccacgtcctcctgctccggccgcat 193
           ||||| |||||||||||||||||||||
Sbjct: 366 caccaggtcctcctgctccggccgcat 340
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 53      agcggcggcgctggccgcgctc 74
               ||||||||||||||||||||||
Sbjct: 1666559 agcggcggcgctggccgcgctc 1666580
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3284763 aaaagcggcggcgctggccgc 3284743
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 52      aagcggcggcgctggccgcgc 72
               |||||||||||||||||||||
Sbjct: 4204590 aagcggcggcgctggccgcgc 4204570
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>ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase 2 (Tpst2), mRNA
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 350 tcctcctgctccggccgcatc 330
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>gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2, mRNA (cDNA clone
           MGC:5752 IMAGE:3494892), complete cds
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 350 tcctcctgctccggccgcatc 330
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>gb|AC123848.4| Mus musculus BAC clone RP23-459I1 from chromosome 5, complete sequence
          Length = 184292

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    tcctcctgctccggccgcatc 194
              |||||||||||||||||||||
Sbjct: 106984 tcctcctgctccggccgcatc 107004
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>emb|CR681868.2|CNS0FP2W Tetraodon nigroviridis full-length cDNA
          Length = 1011

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 8   caacccaaaccctaaaaccac 28
           |||||||||||||||||||||
Sbjct: 850 caacccaaaccctaaaaccac 870
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3726793 aaaagcggcggcgctggccgc 3726773
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 230     ggccgaccccaagccgaagaa 250
               |||||||||||||||||||||
Sbjct: 1587367 ggccgaccccaagccgaagaa 1587347
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3290578 aaaagcggcggcgctggccgc 3290558
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3292411 aaaagcggcggcgctggccgc 3292391
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>dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530127A14
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1767

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 322 tcctcctgctccggccgcatc 302
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>dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730026M21
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1778

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 322 tcctcctgctccggccgcatc 302
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>dbj|AK149379.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730003F03
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1608

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 363 tcctcctgctccggccgcatc 343
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>gb|AC158916.4| Mus musculus chromosome 8, clone RP23-18G2, complete sequence
          Length = 206384

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 342    ggagagaggggtggaggggat 362
              |||||||||||||||||||||
Sbjct: 143238 ggagagaggggtggaggggat 143258
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>dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230119D01
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1716

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 323 tcctcctgctccggccgcatc 303
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>dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
           library, clone:9830107O18 product:protein-tyrosine
           sulfotransferase 2, full insert sequence
          Length = 1742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 288 tcctcctgctccggccgcatc 268
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>dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110062A05
           product:protein-tyrosine sulfotransferase 2, full insert
           sequence
          Length = 1812

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 359 tcctcctgctccggccgcatc 339
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 7        ccaacccaaaccctaaaacca 27
                |||||||||||||||||||||
Sbjct: 23564003 ccaacccaaaccctaaaacca 23564023
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3275879 aaaagcggcggcgctggccgc 3275859
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 54      gcggcggcgctggccgcgctc 74
               |||||||||||||||||||||
Sbjct: 3261644 gcggcggcgctggccgcgctc 3261624
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      ccaacccaaaccctaaaacca 27
              |||||||||||||||||||||
Sbjct: 129686 ccaacccaaaccctaaaacca 129706
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>gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the complete genome
          Length = 11925

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    gctggccgcgctctcctcgcc 82
             |||||||||||||||||||||
Sbjct: 11511 gctggccgcgctctcctcgcc 11491
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>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1669_F01
          Length = 140019

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 7    ccaacccaaaccctaaaacca 27
            |||||||||||||||||||||
Sbjct: 5103 ccaacccaaaccctaaaacca 5123
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>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 50    aaaagcggcggcgctggccgc 70
             |||||||||||||||||||||
Sbjct: 73308 aaaagcggcggcgctggccgc 73288
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>gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransferase-2 mRNA, complete cds
          Length = 1760

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 tcctcctgctccggccgcatc 194
           |||||||||||||||||||||
Sbjct: 305 tcctcctgctccggccgcatc 285
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>gb|AC151475.1| Mus musculus BAC clone RP23-283P1 from 5, complete sequence
          Length = 171663

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    tcctcctgctccggccgcatc 194
              |||||||||||||||||||||
Sbjct: 166986 tcctcctgctccggccgcatc 167006
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 4102270 aaaagcggcggcgctggccgc 4102250
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 4035054 aaaagcggcggcgctggccgc 4035034
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      aaaagcggcggcgctggccgc 70
               |||||||||||||||||||||
Sbjct: 3469370 aaaagcggcggcgctggccgc 3469350
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>gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, complete sequence
          Length = 188439

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   ggagagaggggtggagggga 361
             ||||||||||||||||||||
Sbjct: 97036 ggagagaggggtggagggga 97055
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>gb|AC170171.3| Mus musculus chromosome 1, clone wi1-1827P13, complete sequence
          Length = 41675

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  tcctcctgctccggccgcat 193
            ||||||||||||||||||||
Sbjct: 8715 tcctcctgctccggccgcat 8696
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     cggcggcgctggccgcgctc 74
              ||||||||||||||||||||
Sbjct: 169670 cggcggcgctggccgcgctc 169689
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>ref|XM_523348.1| PREDICTED: Pan troglodytes similar to Cardiotrophin-1 (CT-1)
           (LOC467955), mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 295 gcggcggcgctggccgcgct 314
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>ref|XM_519997.1| PREDICTED: Pan troglodytes LOC464442 (LOC464442), mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 gctctcctcgccggcgccgg 90
          ||||||||||||||||||||
Sbjct: 48 gctctcctcgccggcgccgg 29
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      gcggcggcgctggccgcgct 73
               ||||||||||||||||||||
Sbjct: 2623840 gcggcggcgctggccgcgct 2623821
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>ref|NM_001330.2| Homo sapiens cardiotrophin 1 (CTF1), mRNA
          Length = 1681

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 308 gcggcggcgctggccgcgct 327
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>gb|AC167464.3| Mus musculus chromosome 1, clone wi1-1027B15, complete sequence
          Length = 39655

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   tcctcctgctccggccgcat 193
             ||||||||||||||||||||
Sbjct: 19370 tcctcctgctccggccgcat 19351
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>gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, complete sequence
          Length = 214765

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tcctcctgctccggccgcat 193
              ||||||||||||||||||||
Sbjct: 203196 tcctcctgctccggccgcat 203177
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>gb|BC049822.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone IMAGE:5806399),
           partial cds
          Length = 1665

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 292 gcggcggcgctggccgcgct 311
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>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence
          Length = 177719

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     gcggcggcgctggccgcgct 73
              ||||||||||||||||||||
Sbjct: 104526 gcggcggcgctggccgcgct 104507
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>emb|CR679798.2|CNS0FNHE Tetraodon nigroviridis full-length cDNA
          Length = 1352

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aaaagcccaacccaaaccct 20
            ||||||||||||||||||||
Sbjct: 1042 aaaagcccaacccaaaccct 1023
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gcggcggcgctggccgcgct 73
              ||||||||||||||||||||
Sbjct: 430247 gcggcggcgctggccgcgct 430266
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gcggcggcgctggccgcgct 73
             ||||||||||||||||||||
Sbjct: 12022 gcggcggcgctggccgcgct 12041
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     gcggcggcgctggccgcgctctcc 77
              |||||||||||||||||| |||||
Sbjct: 240670 gcggcggcgctggccgcggtctcc 240647
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   ccccaagccgaagaagaagg 255
             ||||||||||||||||||||
Sbjct: 97424 ccccaagccgaagaagaagg 97405
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>gb|AE005697.1| Caulobacter crescentus CB15 section 23 of 359 of the complete genome
          Length = 13405

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  ccaagccgaagaagaaggcc 257
            ||||||||||||||||||||
Sbjct: 3280 ccaagccgaagaagaaggcc 3261
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>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold
          Length = 444202

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    gcccccatcgcccctctcct 136
              ||||||||||||||||||||
Sbjct: 149028 gcccccatcgcccctctcct 149047
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     ccaagccgaagaagaaggcc 257
               ||||||||||||||||||||
Sbjct: 2981980 ccaagccgaagaagaaggcc 2981961
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>gb|U43030.1|HSU43030 Homo sapiens cardiotrophin-1 (CTF1) mRNA, complete cds
          Length = 1539

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 303 gcggcggcgctggccgcgct 322
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>gb|AC099494.3| Homo sapiens chromosome 16 clone RP11-1102P22, complete sequence
          Length = 143557

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    agagaggggtggaggggatg 363
              ||||||||||||||||||||
Sbjct: 108562 agagaggggtggaggggatg 108543
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>dbj|AB168595.1| Macaca fascicularis testis cDNA clone: QtsA-13311, similar to human
           tyrosylprotein sulfotransferase 2 (TPST2), mRNA, RefSeq:
           NM_003595.2
          Length = 2066

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 tcctcctgctccggccgcat 193
           ||||||||||||||||||||
Sbjct: 575 tcctcctgctccggccgcat 556
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>gb|AC173548.3| Mus musculus chromosome 1, clone wi1-303A11, complete sequence
          Length = 43859

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   tcctcctgctccggccgcat 193
             ||||||||||||||||||||
Sbjct: 38043 tcctcctgctccggccgcat 38062
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>ref|XM_392186.2| PREDICTED: Apis mellifera similar to ENSANGP00000021350 (LOC408646),
            mRNA
          Length = 3222

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  ccaagccgaagaagaaggcc 257
            ||||||||||||||||||||
Sbjct: 2160 ccaagccgaagaagaaggcc 2179
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aagcggcggcgctggccgcg 71
              ||||||||||||||||||||
Sbjct: 214725 aagcggcggcgctggccgcg 214744
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>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    gcggcggcgctggccgcgct 73
             ||||||||||||||||||||
Sbjct: 16904 gcggcggcgctggccgcgct 16923
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      gcggcggcgctggccgcgct 73
               ||||||||||||||||||||
Sbjct: 3769943 gcggcggcgctggccgcgct 3769924
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 54      gcggcggcgctggccgcgct 73
               ||||||||||||||||||||
Sbjct: 1895389 gcggcggcgctggccgcgct 1895408
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>dbj|AK111285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-H08, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   aaaagcccaacccaaaccctaaaa 24
           ||||||||||||| ||||||||||
Sbjct: 445 aaaagcccaaccctaaccctaaaa 468
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>gb|BC036787.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone MGC:46223
           IMAGE:5754188), complete cds
          Length = 1745

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 274 gcggcggcgctggccgcgct 293
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>gb|U43033.1|HSCTONE03 Human cardiotrophin-1 (CTF1) gene, exon 3 and complete cds
          Length = 482

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 145 gcggcggcgctggccgcgct 164
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     ccaagccgaagaagaaggcc 257
               ||||||||||||||||||||
Sbjct: 3310126 ccaagccgaagaagaaggcc 3310107
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>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence
          Length = 193105

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 342  ggagagaggggtggagggga 361
            ||||||||||||||||||||
Sbjct: 5152 ggagagaggggtggagggga 5171
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>gb|BC064416.1| Homo sapiens cardiotrophin 1, mRNA (cDNA clone MGC:70822
           IMAGE:5750481), complete cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcggcggcgctggccgcgct 73
           ||||||||||||||||||||
Sbjct: 308 gcggcggcgctggccgcgct 327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,465,241
Number of Sequences: 3902068
Number of extensions: 2465241
Number of successful extensions: 67778
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66220
Number of HSP's gapped (non-prelim): 1558
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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