ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465073.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
3dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AK070497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
5ref|XM_465064.1| Oryza sativa (japonica cultivar-group), mRNA 64 4e-07
6ref|NM_106560.2| Arabidopsis thaliana unknown protein AT1G79090 ... 44 0.40
7ref|NM_179573.2| Arabidopsis thaliana unknown protein AT1G79090 ... 44 0.40
8emb|BX816545.1|CNS0AASA Arabidopsis thaliana Full-length cDNA Co... 44 0.40
9gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Can... 44 0.40
10gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, com... 44 0.40
11gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP... 44 0.40
12gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 1.6
13gb|AC161572.4| Mus musculus chromosome 15, clone RP23-358J10, co... 42 1.6
14gb|AC099608.6| Mus musculus chromosome 15, clone RP23-372P12, co... 42 1.6
15gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, comp... 42 1.6
16gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, r... 42 1.6
17gb|AC008950.4|AC008950 Homo sapiens chromosome 5 clone CTD-2336H... 42 1.6
18gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90... 42 1.6
19gb|DQ213406.1| Taeniopygia guttata clone 0064P0018C03 amyloid be... 40 6.3
20gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete s... 40 6.3
21gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete s... 40 6.3
22emb|AJ459295.2|SSC459295 Sus scrofa MDGA1 gene for MAM domain co... 40 6.3
23emb|BX936442.10| Zebrafish DNA sequence from clone DKEY-101D4 in... 40 6.3
24gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome... 40 6.3
25emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, compl... 40 6.3
26gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, co... 40 6.3
27gb|AC134049.24| Medicago truncatula clone mth2-21j3, complete se... 40 6.3
28gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 6.3
29gb|AY178004.1| Uncultured proteobacterium clone LFc35 photosynth... 40 6.3
30gb|AY178001.1| Uncultured proteobacterium clone LFc32 photosynth... 40 6.3
31gb|AY177997.1| Uncultured proteobacterium clone LFc28 photosynth... 40 6.3
32gb|AY177995.1| Uncultured proteobacterium clone LFc26 photosynth... 40 6.3
33gb|AY177994.1| Uncultured proteobacterium clone LFc25 photosynth... 40 6.3
34gb|AY177993.1| Uncultured proteobacterium clone LFc24 photosynth... 40 6.3
35gb|AY177987.1| Uncultured proteobacterium clone LFc18 photosynth... 40 6.3
36gb|AY177980.1| Uncultured proteobacterium clone LFc11 photosynth... 40 6.3
37gb|AY177975.1| Uncultured proteobacterium clone LFc5 photosynthe... 40 6.3
38emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in... 40 6.3
39gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 6.3
40gb|AC100863.2| Homo sapiens chromosome 18, clone RP11-751H17, co... 40 6.3
41emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chro... 40 6.3
42dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:2... 40 6.3
43emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chr... 40 6.3
44emb|CT863711.2| Medicago truncatula chromosome 5 clone mth2-152j... 40 6.3
45dbj|AP000560.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 6.3
46dbj|AP001324.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.3 
>ref|XM_465073.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3396

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                       
Query: 376 taccaaatttgatgcatcacagtatgctttctttggta-caatgtcttggaggaggttga 434
           |||||| ||||||||||| ||||||||||||||||| | ||| |   |||| ||||||||
Sbjct: 250 taccaagtttgatgcatcgcagtatgctttctttgggaacaacgcggtggaagaggttga 309

                                     
Query: 435 gctaggtggattgga-gatgatgatg 459
           ||||||||||||||| ||||||||||
Sbjct: 310 gctaggtggattggaggatgatgatg 335
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                            
Query: 376      taccaaatttgatgcatcacagtatgctttctttggta-caatgtcttggaggaggttga 434
                |||||| ||||||||||| ||||||||||||||||| | ||| |   |||| ||||||||
Sbjct: 11298785 taccaagtttgatgcatcgcagtatgctttctttgggaacaacgcggtggaagaggttga 11298726

                                          
Query: 435      gctaggtggattgga-gatgatgatg 459
                ||||||||||||||| ||||||||||
Sbjct: 11298725 gctaggtggattggaggatgatgatg 11298700



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 80/93 (86%), Gaps = 2/93 (2%)
 Strand = Plus / Minus

                                                                            
Query: 369      caggtgataccaaatttgatgcatcacagtatgctttctttgg-tacaatgtcttggagg 427
                |||| |||||||| |||||||| || |||||||||||||||||  |||| |   |||| |
Sbjct: 11216258 caggcgataccaagtttgatgcgtcgcagtatgctttctttggcaacaacgcggtggaag 11216199

                                                 
Query: 428      aggttgagctaggtggattgga-gatgatgatg 459
                | |||||||||||||||||||| ||||||||||
Sbjct: 11216198 aagttgagctaggtggattggaggatgatgatg 11216166
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>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073G17
          Length = 162391

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                          
Query: 376    taccaaatttgatgcatcacagtatgctttctttggta-caatgtcttggaggaggttga 434
              |||||| ||||||||||| ||||||||||||||||| | ||| |   |||| ||||||||
Sbjct: 101600 taccaagtttgatgcatcgcagtatgctttctttgggaacaacgcggtggaagaggttga 101541

                                        
Query: 435    gctaggtggattgga-gatgatgatg 459
              ||||||||||||||| ||||||||||
Sbjct: 101540 gctaggtggattggaggatgatgatg 101515



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 80/93 (86%), Gaps = 2/93 (2%)
 Strand = Plus / Minus

                                                                         
Query: 369   caggtgataccaaatttgatgcatcacagtatgctttctttgg-tacaatgtcttggagg 427
             |||| |||||||| |||||||| || |||||||||||||||||  |||| |   |||| |
Sbjct: 19073 caggcgataccaagtttgatgcgtcgcagtatgctttctttggcaacaacgcggtggaag 19014

                                              
Query: 428   aggttgagctaggtggattgga-gatgatgatg 459
             | |||||||||||||||||||| ||||||||||
Sbjct: 19013 aagttgagctaggtggattggaggatgatgatg 18981
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>dbj|AK070497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B07, full
           insert sequence
          Length = 3396

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                       
Query: 376 taccaaatttgatgcatcacagtatgctttctttggta-caatgtcttggaggaggttga 434
           |||||| ||||||||||| ||||||||||||||||| | ||| |   |||| ||||||||
Sbjct: 250 taccaagtttgatgcatcgcagtatgctttctttgggaacaacgcggtggaagaggttga 309

                                     
Query: 435 gctaggtggattgga-gatgatgatg 459
           ||||||||||||||| ||||||||||
Sbjct: 310 gctaggtggattggaggatgatgatg 335
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>ref|XM_465064.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 258

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 76/88 (86%), Gaps = 2/88 (2%)
 Strand = Plus / Plus

                                                                       
Query: 374 gataccaaatttgatgcatcacagtatgctttctttgg-tacaatgtcttggaggaggtt 432
           |||||||| |||||||| || |||||||||||||||||  |||| |   |||| || |||
Sbjct: 37  gataccaagtttgatgcgtcgcagtatgctttctttggcaacaacgcggtggaagaagtt 96

                                       
Query: 433 gagctaggtggattgga-gatgatgatg 459
           ||||||||||||||||| ||||||||||
Sbjct: 97  gagctaggtggattggaggatgatgatg 124
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>ref|NM_106560.2| Arabidopsis thaliana unknown protein AT1G79090 transcript variant
           AT1G79090.1 mRNA, complete cds
          Length = 2950

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 424 gaggaggttgagctaggtggattgga 449
           |||||||||||||| |||||||||||
Sbjct: 386 gaggaggttgagctgggtggattgga 411
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>ref|NM_179573.2| Arabidopsis thaliana unknown protein AT1G79090 transcript variant
           AT1G79090.2 mRNA, complete cds
          Length = 3148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 424 gaggaggttgagctaggtggattgga 449
           |||||||||||||| |||||||||||
Sbjct: 464 gaggaggttgagctgggtggattgga 489
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>emb|BX816545.1|CNS0AASA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH54ZF06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2821

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 424 gaggaggttgagctaggtggattgga 449
           |||||||||||||| |||||||||||
Sbjct: 375 gaggaggttgagctgggtggattgga 400
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>gb|AC155644.7| Mus musculus 10 BAC RP24-435P22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 161533

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    tctcccaatctcctcctcttcc 44
             ||||||||||||||||||||||
Sbjct: 12761 tctcccaatctcctcctcttcc 12740
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>gb|AC118202.8| Mus musculus chromosome 10, clone RP23-378J3, complete sequence
          Length = 213862

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 23     tctcccaatctcctcctcttcc 44
              ||||||||||||||||||||||
Sbjct: 166179 tctcccaatctcctcctcttcc 166158
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>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete
              sequence
          Length = 181925

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 424    gaggaggttgagctaggtggattgga 449
              |||||||||||||| |||||||||||
Sbjct: 107198 gaggaggttgagctgggtggattgga 107223
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    cagcttgttttcaaggaattt 337
              |||||||||||||||||||||
Sbjct: 476731 cagcttgttttcaaggaattt 476751
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>gb|AC161572.4| Mus musculus chromosome 15, clone RP23-358J10, complete sequence
          Length = 218429

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   atgctttctttggtacaatgt 419
             |||||||||||||||||||||
Sbjct: 40328 atgctttctttggtacaatgt 40348
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>gb|AC099608.6| Mus musculus chromosome 15, clone RP23-372P12, complete sequence
          Length = 147290

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   atgctttctttggtacaatgt 419
             |||||||||||||||||||||
Sbjct: 45343 atgctttctttggtacaatgt 45363
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>gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, complete sequence
          Length = 186265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 402   ctttctttggtacaatgtctt 422
             |||||||||||||||||||||
Sbjct: 79703 ctttctttggtacaatgtctt 79723
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>gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, region 96E-96F, BAC clone
             BACR03O03, complete sequence
          Length = 132168

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   tgctcttcgagatctcagctt 322
             |||||||||||||||||||||
Sbjct: 51663 tgctcttcgagatctcagctt 51683
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>gb|AC008950.4|AC008950 Homo sapiens chromosome 5 clone CTD-2336H4, complete sequence
          Length = 111183

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 402   ctttctttggtacaatgtctt 422
             |||||||||||||||||||||
Sbjct: 46562 ctttctttggtacaatgtctt 46582
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>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the
             complete sequence
          Length = 188285

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   tgctcttcgagatctcagctt 322
             |||||||||||||||||||||
Sbjct: 62177 tgctcttcgagatctcagctt 62197
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>gb|DQ213406.1| Taeniopygia guttata clone 0064P0018C03 amyloid beta (A4) precursor
           protein-binding-like mRNA, complete sequence
          Length = 1213

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 ggttcggctcggctctgctc 306
           ||||||||||||||||||||
Sbjct: 278 ggttcggctcggctctgctc 259
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>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence
          Length = 129742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 382   atttgatgcatcacagtatgctttctttggta 413
             |||||||||||| || ||||| ||||||||||
Sbjct: 68659 atttgatgcatctcaatatgcattctttggta 68628
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>gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete sequence
          Length = 98246

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 382   atttgatgcatcacagtatgctttctttggta 413
             |||||||||||| || ||||| ||||||||||
Sbjct: 44037 atttgatgcatctcaatatgcattctttggta 44006
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>emb|AJ459295.2|SSC459295 Sus scrofa MDGA1 gene for MAM domain containing
             glycosylphosphatidylinositol anchor 1 protein, exons 3-17
          Length = 27671

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    cccaatctcctcctcttccaccat 49
             |||||||||||||||| |||||||
Sbjct: 13969 cccaatctcctcctctcccaccat 13992
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>emb|BX936442.10| Zebrafish DNA sequence from clone DKEY-101D4 in linkage group 21,
              complete sequence
          Length = 229721

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     aatctcctcctcttccacca 48
              ||||||||||||||||||||
Sbjct: 132223 aatctcctcctcttccacca 132242
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>gb|AC124510.4| Mus musculus BAC clone RP23-434A8 from chromosome 12, complete sequence
          Length = 194104

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   cttgttttcaaggaattttg 339
             ||||||||||||||||||||
Sbjct: 75874 cttgttttcaaggaattttg 75893
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>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence
          Length = 136520

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   ggttcggctcggctctgctc 306
             ||||||||||||||||||||
Sbjct: 88825 ggttcggctcggctctgctc 88844
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>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence
          Length = 214124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    tgctagccacggatttgctc 252
              ||||||||||||||||||||
Sbjct: 111774 tgctagccacggatttgctc 111755
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>gb|AC134049.24| Medicago truncatula clone mth2-21j3, complete sequence
          Length = 124857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  ctagcggagcctcttcacggttcg 292
            |||||||||| |||||||||||||
Sbjct: 2007 ctagcggagcatcttcacggttcg 1984
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 400    tgctttctttggtacaatgt 419
              ||||||||||||||||||||
Sbjct: 155866 tgctttctttggtacaatgt 155885
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>gb|AY178004.1| Uncultured proteobacterium clone LFc35 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY178001.1| Uncultured proteobacterium clone LFc32 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177997.1| Uncultured proteobacterium clone LFc28 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177995.1| Uncultured proteobacterium clone LFc26 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177994.1| Uncultured proteobacterium clone LFc25 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177993.1| Uncultured proteobacterium clone LFc24 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177987.1| Uncultured proteobacterium clone LFc18 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177980.1| Uncultured proteobacterium clone LFc11 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>gb|AY177975.1| Uncultured proteobacterium clone LFc5 photosynthetic reaction
           center M subunit (pufM) gene, partial cds
          Length = 229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 cggctcggctctgctcttcg 310
           ||||||||||||||||||||
Sbjct: 89  cggctcggctctgctcttcg 108
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>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete
              sequence
          Length = 219065

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    cttcgagatctcagcttgttttca 329
              ||||| ||||||||||||||||||
Sbjct: 161988 cttcgtgatctcagcttgttttca 162011
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>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     cccaatctcctcctcttccaccat 49
              ||||| ||||||||||||||||||
Sbjct: 114096 cccaacctcctcctcttccaccat 114073
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>gb|AC100863.2| Homo sapiens chromosome 18, clone RP11-751H17, complete sequence
          Length = 175527

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    cccaatctcctcctcttccaccat 49
             ||||| ||||||||||||||||||
Sbjct: 23779 cccaacctcctcctcttccaccat 23756
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>emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chromosome 2, complete
             sequence
          Length = 56898

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    atctcctcctcttccaccat 49
             ||||||||||||||||||||
Sbjct: 22949 atctcctcctcttccaccat 22930
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>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete
            sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  ggttcggctcggctctgctc 306
            ||||||||||||||||||||
Sbjct: 1940 ggttcggctcggctctgctc 1921
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>emb|BX682231.5| Mouse DNA sequence from clone RP24-369N16 on chromosome 2, complete
            sequence
          Length = 48121

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  tatgctttctttggtacaat 417
            ||||||||||||||||||||
Sbjct: 6814 tatgctttctttggtacaat 6833
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>emb|CT863711.2| Medicago truncatula chromosome 5 clone mth2-152j13, COMPLETE SEQUENCE
          Length = 108806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 269   ctagcggagcctcttcacggttcg 292
             |||||||||| |||||||||||||
Sbjct: 18002 ctagcggagcatcttcacggttcg 18025
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>dbj|AP000560.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-8M21, complete
             sequence
          Length = 118300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tctcccaatctcctcctctt 42
             ||||||||||||||||||||
Sbjct: 76457 tctcccaatctcctcctctt 76438
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>dbj|AP001324.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-864N7, complete
              sequences
          Length = 230157

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tctcccaatctcctcctctt 42
              ||||||||||||||||||||
Sbjct: 203724 tctcccaatctcctcctctt 203705


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,021,432
Number of Sequences: 3902068
Number of extensions: 3021432
Number of successful extensions: 63250
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63125
Number of HSP's gapped (non-prelim): 125
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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