ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481188.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
2ref|XM_470672.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.75
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.75
4gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, comp... 42 0.75
5emb|AL365445.11| Human DNA sequence from clone RP4-796B4 on chro... 42 0.75
6emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 42 0.75
7emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chro... 42 0.75
8dbj|AK003078.1| Mus musculus adult male spleen cDNA, RIKEN full-... 42 0.75
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
12gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genom... 42 0.75
13dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
14dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
15dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.75
16gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, com... 42 0.75
17gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosom... 40 3.0
18gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
19gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.0
20gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 3.0
21gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 3.0
22gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 3.0
23gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, co... 40 3.0
24gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 3.0
25gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome ... 40 3.0
26gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome ... 40 3.0
27gb|AC101810.5| Mus musculus chromosome 15, clone RP24-278M16, co... 40 3.0
28gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 3.0
29gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 3.0
30emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.0
31emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 3.0
32dbj|BS000602.1| Pan troglodytes chromosome Y clone:PTB-547B05, c... 40 3.0
33gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 3.0
34gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 3.0
35gb|AY740398.1|AY740398S1 Aegilops tauschii starch branching enzy... 40 3.0
36gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence 40 3.0
37gb|CP000249.1| Frankia sp. CcI3, complete genome 40 3.0
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
39gb|AC147670.4| Pan troglodytes BAC clone CH251-94F1 from chromos... 40 3.0
40gb|AC151848.4| Pan troglodytes BAC clone CH251-346F2 from chromo... 40 3.0
41gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 3.0
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.0
43gb|AF463669.1| Mus musculus strain C57BL/6J cytokine gene cluste... 40 3.0
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.0
45dbj|AB181127.1| Rhodococcus sp. DFA3 ORF2S, flnR, flnB, dbfA1 ge... 40 3.0
46emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-5... 40 3.0
47gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 3.0
48gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, compl... 40 3.0
49gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381... 40 3.0
50gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, comple... 40 3.0
51dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 3.0
52gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome... 40 3.0
53emb|AL807814.5| Mouse DNA sequence from clone RP23-392I19 on chr... 40 3.0
54emb|AL928667.4| Mouse DNA sequence from clone RP23-139J18 on chr... 40 3.0
55emb|AL669895.9| Mouse DNA sequence from clone RP23-31N7 on chrom... 40 3.0
56emb|AJ249917.1|SDO249917 Aphrocallistes vastus mRNA for putative... 40 3.0
57emb|AJ245813.1|AVA245813 Aphrocallistes vastus mRNA for potentia... 40 3.0
58emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on ch... 40 3.0 
>ref|XM_481188.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1608

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 90  gccaccgccgcgacgccgcgc 110
           |||||||||||||||||||||
Sbjct: 127 gccaccgccgcgacgccgcgc 107
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>ref|XM_470672.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1083

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 86  gccggccaccgccgcgacgccgcgc 110
           |||||||||||||||| ||||||||
Sbjct: 471 gccggccaccgccgcgccgccgcgc 447
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 86       gccggccaccgccgcgacgccgcgc 110
                |||||||||||||||| ||||||||
Sbjct: 14422613 gccggccaccgccgcgccgccgcgc 14422589
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>gb|AC119848.8| Mus musculus chromosome 7, clone RP23-73B20, complete sequence
          Length = 239297

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 14     cccactctctctcccccaccctccgcctc 42
              |||||||||||| ||||||||||| ||||
Sbjct: 117062 cccactctctcttccccaccctccacctc 117090
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>emb|AL365445.11| Human DNA sequence from clone RP4-796B4 on chromosome 1p32.1-33
             Contains a novel pseudogene (FLJ40434), the DMRTB1 gene
             for DMRT-like family B with proline-rich C-terminal, 1 and
             two CpG islands, complete sequence
          Length = 106438

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    actctctctcccccaccctcc 37
             |||||||||||||||||||||
Sbjct: 92677 actctctctcccccaccctcc 92697
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 80     atcgacgccggccaccgccgcgacg 104
              ||||||||||||||| |||||||||
Sbjct: 139398 atcgacgccggccacggccgcgacg 139422
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>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the
             3' end of the Nrp2 gene for neuropilin 2, complete
             sequence
          Length = 157987

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    cccactctctctcccccaccc 34
             |||||||||||||||||||||
Sbjct: 63469 cccactctctctcccccaccc 63449
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>dbj|AK003078.1| Mus musculus adult male spleen cDNA, RIKEN full-length enriched
           library, clone:0910001J09 product:ubiquitin carrier
           protein E2 homolog [Homo sapiens], full insert sequence
          Length = 1001

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 14  cccactctctctcccccaccc 34
           |||||||||||||||||||||
Sbjct: 952 cccactctctctcccccaccc 932
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 90       gccaccgccgcgacgccgcgc 110
                |||||||||||||||||||||
Sbjct: 10466780 gccaccgccgcgacgccgcgc 10466800
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 86       gccggccaccgccgcgacgccgcgc 110
                |||||||||||||||| ||||||||
Sbjct: 14417588 gccggccaccgccgcgccgccgcgc 14417564
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 86      gccggccaccgccgcgacgccgcgcaccg 114
               |||||||||||||||| |||||| |||||
Sbjct: 7474533 gccggccaccgccgcgccgccgcccaccg 7474505
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>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
              sequence
          Length = 135594

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 86     gccggccaccgccgcgacgccgcgc 110
              |||||||||||||||| ||||||||
Sbjct: 118768 gccggccaccgccgcgccgccgcgc 118792
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>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1705_E12
          Length = 191416

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 86    gccggccaccgccgcgacgccgcgcaccg 114
             |||||||||||||||| |||||| |||||
Sbjct: 68239 gccggccaccgccgcgccgccgcccaccg 68211
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>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091D16
          Length = 174222

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     gccaccgccgcgacgccgcgc 110
              |||||||||||||||||||||
Sbjct: 167738 gccaccgccgcgacgccgcgc 167758
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>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0053M06
          Length = 175416

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    gccaccgccgcgacgccgcgc 110
             |||||||||||||||||||||
Sbjct: 89371 gccaccgccgcgacgccgcgc 89391
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>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence
          Length = 205102

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 14  cccactctctctcccccaccctccgcctc 42
           |||||||||||| ||||||||||| ||||
Sbjct: 478 cccactctctcttccccaccctccacctc 450
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>gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosome 1, complete sequence
          Length = 224730

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 186680 ctctctctcccccaccctcc 186661
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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16,
              complete sequence
          Length = 139615

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 82     cgacgccggccaccgccgcgacgccgcg 109
              |||||||| ||||||||||| |||||||
Sbjct: 137750 cgacgccgcccaccgccgcgccgccgcg 137777
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>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006B22, complete sequence
          Length = 166052

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 82    cgacgccggccaccgccgcgacgccgcg 109
             |||||||| ||||||||||| |||||||
Sbjct: 56870 cgacgccgcccaccgccgcgccgccgcg 56897
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 90   gccaccgccgcgacgccgcgcaccggccccgc 121
            ||||||||||||||||||| | ||||| ||||
Sbjct: 8992 gccaccgccgcgacgccgcccgccggcgccgc 9023
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 90     gccaccgccgcgacgccgcgcaccggccccgc 121
              ||||||||||||||||||| | ||||| ||||
Sbjct: 812790 gccaccgccgcgacgccgcccgccggcgccgc 812821
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 85      cgccggccaccgccgcgacgccgc 108
               |||||||| |||||||||||||||
Sbjct: 5720166 cgccggccgccgccgcgacgccgc 5720189
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>gb|AC122118.7| Mus musculus chromosome 18, clone RP24-225P17, complete sequence
          Length = 190301

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    cccactctctctcccccaccctcc 37
             ||||||||||| ||||||||||||
Sbjct: 51330 cccactctctcacccccaccctcc 51353
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 85      cgccggccaccgccgcgacgccgc 108
               |||||||| |||||||||||||||
Sbjct: 5515210 cgccggccgccgccgcgacgccgc 5515233
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>gb|AC129078.6| Mus musculus BAC clone RP24-71C5 from chromosome 18, complete sequence
          Length = 215826

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    cccactctctctcccccaccctcc 37
             ||||||||||| ||||||||||||
Sbjct: 48500 cccactctctcacccccaccctcc 48477
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>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence
          Length = 198019

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ccaaattcaaaacccactct 21
             ||||||||||||||||||||
Sbjct: 50375 ccaaattcaaaacccactct 50394
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>gb|AC101810.5| Mus musculus chromosome 15, clone RP24-278M16, complete sequence
          Length = 178304

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ccaaattcaaaacccactct 21
              ||||||||||||||||||||
Sbjct: 171955 ccaaattcaaaacccactct 171974
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      cgccgcgacgccgcgcaccg 114
               ||||||||||||||||||||
Sbjct: 4657191 cgccgcgacgccgcgcaccg 4657210
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>gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-114F4, complete
              sequence
          Length = 208199

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 179950 ctctctctcccccaccctcc 179931
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 90     gccaccgccgcgacgccgcgcaccggccccgc 121
              ||||||||||||||||||| | ||||| ||||
Sbjct: 655196 gccaccgccgcgacgccgcccgccggcgccgc 655227
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    gacgccgcgcaccggccccg 120
              ||||||||||||||||||||
Sbjct: 202213 gacgccgcgcaccggccccg 202194
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>dbj|BS000602.1| Pan troglodytes chromosome Y clone:PTB-547B05, complete sequences
          Length = 211728

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 135466 ctctctctcccccaccctcc 135447
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 187     accctccccctcaagagggg 206
               ||||||||||||||||||||
Sbjct: 4568896 accctccccctcaagagggg 4568877
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 827374 ctctctctcccccaccctcc 827355
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>gb|AY740398.1|AY740398S1 Aegilops tauschii starch branching enzyme IIb (SBE II-DB1) gene,
            exons 1 through 16
          Length = 14896

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   ccaccgccgcgacgccgcgc 110
            ||||||||||||||||||||
Sbjct: 8423 ccaccgccgcgacgccgcgc 8404
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>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence
          Length = 36615

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cgccgcgcaccggccccgcc 122
             ||||||||||||||||||||
Sbjct: 34270 cgccgcgcaccggccccgcc 34289
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 125     gccggatctcgcgcgccggctccc 148
               ||||||||||| ||||||||||||
Sbjct: 4106268 gccggatctcgggcgccggctccc 4106245
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 82       cgacgccggccaccgccgcgacgccgcg 109
                |||||||| ||||||||||| |||||||
Sbjct: 14721456 cgacgccgcccaccgccgcgccgccgcg 14721483
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>gb|AC147670.4| Pan troglodytes BAC clone CH251-94F1 from chromosome y, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 104065 ctctctctcccccaccctcc 104046
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>gb|AC151848.4| Pan troglodytes BAC clone CH251-346F2 from chromosome y, complete
             sequence
          Length = 147582

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctctctctcccccaccctcc 37
             ||||||||||||||||||||
Sbjct: 36501 ctctctctcccccaccctcc 36482
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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tctctcccccaccctccgcc 40
             ||||||||||||||||||||
Sbjct: 67158 tctctcccccaccctccgcc 67177
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 50      ggccccagcggcagccgtcg 69
               ||||||||||||||||||||
Sbjct: 5464043 ggccccagcggcagccgtcg 5464024
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>gb|AF463669.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 1845

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   ctctctctcccccaccctcc 37
            ||||||||||||||||||||
Sbjct: 1773 ctctctctcccccaccctcc 1754
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      ccaccgccgcgacgccgcgc 110
               ||||||||||||||||||||
Sbjct: 3207759 ccaccgccgcgacgccgcgc 3207778
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>dbj|AB181127.1| Rhodococcus sp. DFA3 ORF2S, flnR, flnB, dbfA1 gene for putative
            transposase, putative reguratory protein, short-chain
            dehydrogenase/reductase, angular dioxygenase large
            subunit, partial and complete cds
          Length = 4507

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   ccgcgacgccgcgcaccggc 116
            ||||||||||||||||||||
Sbjct: 1053 ccgcgacgccgcgcaccggc 1072
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>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185799

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     cccactctctctcccccaccctcc 37
              |||||||||||||| |||||||||
Sbjct: 102474 cccactctctctccaccaccctcc 102497
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 90     gccaccgccgcgacgccgcgcaccggccccgc 121
              ||||||||||||||||||| | ||||| ||||
Sbjct: 564161 gccaccgccgcgacgccgcccgccggcgccgc 564192
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>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence
          Length = 202603

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     cccactctctctcccccaccctcc 37
              ||||||||||||||||| ||||||
Sbjct: 112299 cccactctctctccccctccctcc 112322
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>gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381, complete sequence
          Length = 39143

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    ctctctctcccccaccctcc 37
             ||||||||||||||||||||
Sbjct: 28051 ctctctctcccccaccctcc 28070
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>gb|AC135290.5| Mus musculus BAC clone RP23-58D13 from 18, complete sequence
          Length = 233915

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    cccactctctctcccccaccctcc 37
             ||||||||||| ||||||||||||
Sbjct: 19586 cccactctctcacccccaccctcc 19563
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 34      ctccgcctcatccgatggcc 53
               ||||||||||||||||||||
Sbjct: 2558566 ctccgcctcatccgatggcc 2558547



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ggccaccgccgcgacgccgc 108
              ||||||||||||||||||||
Sbjct: 707055 ggccaccgccgcgacgccgc 707036
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>gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome 15, complete sequence
          Length = 198278

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctctctctcccccaccctcc 37
             ||||||||||||||||||||
Sbjct: 93431 ctctctctcccccaccctcc 93412
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>emb|AL807814.5| Mouse DNA sequence from clone RP23-392I19 on chromosome X, complete
              sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ctctctctcccccaccctcc 37
              ||||||||||||||||||||
Sbjct: 164808 ctctctctcccccaccctcc 164789
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>emb|AL928667.4| Mouse DNA sequence from clone RP23-139J18 on chromosome 4, complete
             sequence
          Length = 121094

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctctctctcccccaccctcc 37
             ||||||||||||||||||||
Sbjct: 39434 ctctctctcccccaccctcc 39415
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>emb|AL669895.9| Mouse DNA sequence from clone RP23-31N7 on chromosome X, complete
             sequence
          Length = 197638

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    actctctctcccccaccctc 36
             ||||||||||||||||||||
Sbjct: 69136 actctctctcccccaccctc 69117
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>emb|AJ249917.1|SDO249917 Aphrocallistes vastus mRNA for putative multidrug resistance
           protein (pohl gene)
          Length = 1068

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 cctccccctcaagagggggc 208
           ||||||||||||||||||||
Sbjct: 89  cctccccctcaagagggggc 108
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>emb|AJ245813.1|AVA245813 Aphrocallistes vastus mRNA for potential multidrug resistance
           protein (POHL gene)
          Length = 1068

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 cctccccctcaagagggggc 208
           ||||||||||||||||||||
Sbjct: 89  cctccccctcaagagggggc 108
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>emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on chromosome 11, complete
             sequence
          Length = 101730

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    ctctctctcccccaccctcc 37
             ||||||||||||||||||||
Sbjct: 37427 ctctctctcccccaccctcc 37446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,855,670
Number of Sequences: 3902068
Number of extensions: 1855670
Number of successful extensions: 47090
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45296
Number of HSP's gapped (non-prelim): 1794
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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