ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3... 27 8.9

>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase XNP) (X-linked nuclear protein)
           (dXNP) (d-xnp)
          Length = 1311

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -2

Query: 183 ADKEEAATWARSKHGRRSRARGHXXXXXXXXXXXSALEIEDEDEKNTAG 37
           +D EEAAT ++    RRS++               A E E+E+E+ ++G
Sbjct: 268 SDSEEAATTSKKSRQRRSKSESE----ADSDYEAPAAEEEEEEERKSSG 312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,806,430
Number of Sequences: 219361
Number of extensions: 233635
Number of successful extensions: 776
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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