Clone Name | bastl33g04 |
---|---|
Clone Library Name | barley_pub |
>gb|AY391261.1| Uncultured dinoflagellate BSL-2003 heat shock protein 90 gene, partial cds Length = 1547 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ttcttctcgtcctcgtcctcgat 69 ||||||||||||||||||||||| Sbjct: 1526 ttcttctcgtcctcgtcctcgat 1504
>gb|AY391255.1| Heterocapsa triquetra heat shock protein 90 gene, partial cds Length = 1671 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ttcttctcgtcctcgtcctcgat 69 ||||||||||||||||||||||| Sbjct: 1526 ttcttctcgtcctcgtcctcgat 1504
>gb|AY729855.1| Heterocapsa triquetra heat shock protein 90 gene, partial cds Length = 1734 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 ttcttctcgtcctcgtcctcgat 69 ||||||||||||||||||||||| Sbjct: 1562 ttcttctcgtcctcgtcctcgat 1540
>ref|XM_505226.1| Yarrowia lipolytica CLIB122, YALI0F09878g predicted mRNA Length = 1083 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 45 tattcttctcgtcctcgtcctcgatctcga 74 |||||| |||||| |||||||||||||||| Sbjct: 343 tattctcctcgtcatcgtcctcgatctcga 314
>emb|AJ634631.1| Yarrowia lipolytica AIP1 gene for ANL1P interacting protein Length = 1978 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 45 tattcttctcgtcctcgtcctcgatctcga 74 |||||| |||||| |||||||||||||||| Sbjct: 1038 tattctcctcgtcatcgtcctcgatctcga 1009
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 45 tattcttctcgtcctcgtcctcgatctcga 74 |||||| |||||| |||||||||||||||| Sbjct: 1345473 tattctcctcgtcatcgtcctcgatctcga 1345444
>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1, xilon1 retrotransposon, helitron B73_14578, gypsy retrotransposon huck1 and ruda retrotransposon, complete sequence Length = 152384 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 gcctcgggctcgggagcgtcg 138 ||||||||||||||||||||| Sbjct: 1716 gcctcgggctcgggagcgtcg 1736
>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1) gene, complete cds Length = 169976 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 gcctcgggctcgggagcgtcg 138 ||||||||||||||||||||| Sbjct: 136508 gcctcgggctcgggagcgtcg 136488
>ref|XM_785534.1| PREDICTED: Strongylocentrotus purpuratus similar to P2X purinoceptor 7 (ATP receptor) (P2X7) (Purinergic receptor) (P2Z receptor) (LOC585718), mRNA Length = 1106 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ctcgtcctcgtcctcgatctc 72 ||||||||||||||||||||| Sbjct: 264 ctcgtcctcgtcctcgatctc 244
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ctcgtcctcgtcctcgatct 71 |||||||||||||||||||| Sbjct: 98458 ctcgtcctcgtcctcgatct 98477
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ggtcgccgcctcctccttgt 179 |||||||||||||||||||| Sbjct: 190922 ggtcgccgcctcctccttgt 190903
>gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds Length = 2540 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttcttctcgtcctcgtcctc 66 |||||||||||||||||||| Sbjct: 1675 ttcttctcgtcctcgtcctc 1656
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgtcctcgtcctcgatctcg 73 |||||||||||||||||||| Sbjct: 2614040 cgtcctcgtcctcgatctcg 2614059
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacctcgcccaggtcgccgc 168 |||||||||||||||||||| Sbjct: 1430013 gacctcgcccaggtcgccgc 1430032
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acctcgcccaggtcgccgcc 169 |||||||||||||||||||| Sbjct: 3380762 acctcgcccaggtcgccgcc 3380743
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cgtcctcgtcctcgatctcg 73 |||||||||||||||||||| Sbjct: 2246806 cgtcctcgtcctcgatctcg 2246787 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,282,826 Number of Sequences: 3902068 Number of extensions: 2282826 Number of successful extensions: 105000 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104678 Number of HSP's gapped (non-prelim): 322 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)