ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl33f09 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 84.7 bits (208), Expect(2) = 5e-25 Identities = 38/58 (65%), Positives = 48/58 (82%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISST 247 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQ+ISST Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Score = 47.4 bits (111), Expect(2) = 5e-25 Identities = 23/34 (67%), Positives = 28/34 (82%) Frame = +3 Query: 252 VDHNNGGRGKVVAEANLEQWLLPTNLPFITTGEN 353 VD +NGGRGKV AEA LEQW+ T+LP +TTGE+ Sbjct: 62 VDQDNGGRGKVGAEAELEQWV--TSLPSLTTGES 93
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 85.9 bits (211), Expect(2) = 1e-24 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTIR 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQ++SS++ Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 RP 259 P Sbjct: 61 DP 62 Score = 45.1 bits (105), Expect(2) = 1e-24 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +3 Query: 252 VDHNNGGRGKVVAEANLEQWLLPTNLPFITTGEN 353 VD NNG RG+V EA+LEQWL T+LP +TTGE+ Sbjct: 60 VDPNNGNRGRVGTEASLEQWL--TSLPSLTTGES 91
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 83.2 bits (204), Expect(2) = 3e-24 Identities = 39/62 (62%), Positives = 49/62 (79%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTIR 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQ+ISST Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 RP 259 P Sbjct: 62 DP 63 Score = 46.2 bits (108), Expect(2) = 3e-24 Identities = 23/34 (67%), Positives = 28/34 (82%) Frame = +3 Query: 252 VDHNNGGRGKVVAEANLEQWLLPTNLPFITTGEN 353 VD NNG RGKV AEA+LEQW L ++LP +TTGE+ Sbjct: 61 VDPNNGNRGKVGAEASLEQW-LTSSLPSLTTGES 93
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 52.0 bits (123), Expect(2) = 8e-12 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTI 250 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQ++S+T+ Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Score = 35.4 bits (80), Expect(2) = 8e-12 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +3 Query: 255 DHNNGGRGKVVAEANLEQWLLPTNLPFITTGEN 353 D NN GRG V +EANLEQ L T+LP ++ GE+ Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGES 91
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 51.6 bits (122), Expect(2) = 9e-10 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTI 250 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +++SS + Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDV 63 Score = 28.9 bits (63), Expect(2) = 9e-10 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 255 DHNNGGRGKVVAEANLEQWLLPTNLPFITTGEN 353 D NG +GK+ A+LE W+ T + +T GE+ Sbjct: 65 DSENGSKGKLGKAAHLEDWI--TTITSLTAGES 95
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 57.4 bits (137), Expect = 9e-09 Identities = 27/59 (45%), Positives = 43/59 (72%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTI 250 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ Q+IS ++ Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSV 61
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 52.8 bits (125), Expect = 2e-07 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 5/64 (7%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ Q+ISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 IRRP 259 P Sbjct: 61 QSDP 64
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 42.4 bits (98), Expect(2) = 1e-05 Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 6/68 (8%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLG--RGVTCQV 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV ++ Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTIRRP 259 +S+T R P Sbjct: 63 VSATARDP 70 Score = 24.3 bits (51), Expect(2) = 1e-05 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +3 Query: 255 DHNNGGRGKVVAEANLEQ 308 D +NGGRGK+ A+LE+ Sbjct: 69 DPSNGGRGKLGKPAHLEE 86
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 46.6 bits (109), Expect = 2e-05 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 5/59 (8%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISS 244 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ Q+ISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISS 59
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 45.1 bits (105), Expect = 4e-05 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 19/80 (23%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQVISST 247 +D +T LGR V Q+IS+T Sbjct: 59 LDNLTAFLGRSVALQLISAT 78
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 44.7 bits (104), Expect = 6e-05 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 14/67 (20%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQVISST 247 Q+IS+T Sbjct: 63 LQLISAT 69
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 44.3 bits (103), Expect = 7e-05 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 19/71 (26%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQVISST 247 R V+ Q+IS+T Sbjct: 64 RSVSLQLISAT 74
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 41.2 bits (95), Expect = 6e-04 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 15/66 (22%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QVISST 247 Q+IS+T Sbjct: 61 QLISAT 66
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 22/68 (32%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQVISST 247 Q+IS+T Sbjct: 67 AIQLISAT 74
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/45 (48%), Positives = 30/45 (66%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQVISST 247 G +KG+VVLM KN L+ N G+ V D + LGR V+ Q+IS+T Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISAT 48
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 20/67 (29%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QVISSTI 250 ++IS+T+ Sbjct: 68 RLISATV 74
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 37.4 bits (85), Expect = 0.009 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 4/43 (9%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----VMDGVTELLGRGVT 226 +G +KG+VVLM KN LDFN + V+D T +LG+GV+ Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVS 49
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 33.9 bits (76), Expect = 0.10 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -1 Query: 219 PRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 PRPRS+ PS AP + + R+ PL W P+R ++L+ PPTP Sbjct: 246 PRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQR---QTLSRPPTP 297
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.86 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLDKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.86 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLDKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.8 bits (68), Expect = 0.86 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = -1 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNIFARSL 49 V P P S +PS AP L SS + ++ W R PP + +PP P+I + L Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSIPTQDL 616
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 237 MTWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPT 73 MT +TP P S+ T P+ T +P + ++ T P P PP + T+PPT Sbjct: 1504 MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 1559 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = -1 Query: 222 TPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPT 73 TP P + T P+ T +P + ++ T P P PP + T+PPT Sbjct: 1585 TPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 1638
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFNDFGAT--VMDGVTELLGRGVTCQVISST 247 G +G +KG++V+M+KN LD N + ++D +G V ++T Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAAT 54
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 246 VELMTWQVTPRP--RSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 91 V+L T V P+P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1015 VDLPTLAVLPQPPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -3 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTI 250 LM+K AL F+DF + G L G+TC++I +T+ Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPATL 892
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 29.3 bits (64), Expect = 2.5 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%) Frame = +2 Query: 2 HSSTTAS*LIKRAT---LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNAL 160 H A I+R L + R +FG G +D T LR + VVLM KNA+ Sbjct: 110 HMQQVAEPYIRRRAMRHLEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAV 169 Query: 161 D 163 D Sbjct: 170 D 170
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -3 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/52 (36%), Positives = 20/52 (38%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPN 67 TP P S TPS T P S T P P P S T PTP+ Sbjct: 96 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTP-TPSPTPTPSPTPSPTPS 146
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>2A5R_MOUSE (Q9Z176) Protein phosphatase 2A, 59 kDa regulatory subunit B (PP2A| PR59) (PP2A B''-PR59) Length = 491 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 114 PRRPPVRSLTMPPTPNIFARSLGSVAR 34 P RPP+R+L P A++L S+AR Sbjct: 2 PERPPIRALRRDPDDPAVAQALASLAR 28
>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)| Length = 5635 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -3 Query: 334 NGRFVGSSHCSRFASATTFPRPPLLWS 254 N F G S S SAT +P+P + W+ Sbjct: 620 NQSFTGGSEVSIMCSATGYPKPKIAWT 646
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 243 ELMTWQVTPRPR-SSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS--LTMPPT 73 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 72 P 70 P Sbjct: 625 P 625
>VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtVAMP723)| Length = 217 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/40 (25%), Positives = 24/40 (60%) Frame = +2 Query: 143 MRKNALDFNDFGATVMDGVTELLGRGVTCQVISSTIRRPQ 262 + K ++ + +M+ + ++L RGV C+++ S+ +PQ Sbjct: 131 LAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQ 170
>WC2_NEUCR (P78714) White collar 2 protein (WC2)| Length = 530 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = -1 Query: 234 TWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPT 73 TW+++ RS VTPS A + + ++ M + P P SL + T Sbjct: 327 TWRMSQEGRSDVTPSDDTATQMGMTPFYIPMNAQADVMMPPPSQPASSLNIALT 380
>PRP45_EMENI (Q5AU50) Pre-mRNA-splicing factor prp45 (Pre-mRNA-processing| protein 45) Length = 583 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 50 RDRAKMFGVGGIVSDLTGGLRGAHLK 127 +D A FG+ +++D+TGG GA K Sbjct: 535 KDTADPFGIDSMIADVTGGAGGAGQK 560
>NU2M_TETNG (Q4JQI6) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 348 Score = 27.3 bits (59), Expect = 9.5 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -1 Query: 210 RSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 R S ++T+AP +L + R +TT+P L +P TP I Sbjct: 294 RLSYAMTLTIAPNNLTGTLPWRTQTTQPNMMTATMAASSILLLPMTPGI 342
>ATP7A_MOUSE (Q64430) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein homolog) Length = 1491 Score = 27.3 bits (59), Expect = 9.5 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Frame = +2 Query: 38 ATLPRDRAKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFND--FGATVMD------ 193 A + R+ + G+ ++ LT G +V+ R A + FGA VM+ Sbjct: 495 ANIERNLRREEGIYSVLVALTAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGN 554 Query: 194 GVTELLGRGVTC 229 G+ EL+ RG+TC Sbjct: 555 GILELVVRGMTC 566
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -1 Query: 258 GRRMVELMTWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLT 85 G R + +W VTPRP S+ +++P LK SA T++ + R P Sbjct: 249 GFREADPDSWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQ 308 Query: 84 MPPTPNI 64 + P P++ Sbjct: 309 LLPAPDV 315
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -1 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA---PRRPPVRSLTMPPTP 70 V+P P +SVTP+ T P + + T P A P P + T+ PTP Sbjct: 641 VSPTPTASVTPTPTPTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTVTPTP 695 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.115 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,379,622 Number of Sequences: 219361 Number of extensions: 557063 Number of successful extensions: 1957 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 1894 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1953 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
