Clone Name | bastl33f05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y5843_ARATH (Q9FT92) Protein At5g08430 | 28 | 4.0 | 2 | LMBTL_HUMAN (Q9Y468) Lethal(3)malignant brain tumor-like protein... | 27 | 8.9 |
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>Y5843_ARATH (Q9FT92) Protein At5g08430| Length = 553 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 313 SEGVAEAEEDASDGGDGETATQVVEELRRL 224 SE + +++D D GDGET VE++R L Sbjct: 462 SEVIELSDDDEDDNGDGETLDPKVEDVRVL 491
>LMBTL_HUMAN (Q9Y468) Lethal(3)malignant brain tumor-like protein (L(3)mbt-like)| (L(3)mbt protein homolog) (H-l(3)mbt protein) (H-L(3)MBT) (L3MBTL1) Length = 772 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -3 Query: 328 SAALVSEGVAEAEEDASDGGDGETATQVVEE 236 S L EGV E E+ + GDGE Q E+ Sbjct: 49 SPELRQEGVTEYEDGGAPAGDGEAGPQQAED 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,157,149 Number of Sequences: 219361 Number of extensions: 197534 Number of successful extensions: 1203 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1202 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)