Clone Name | bastl33e11 |
---|---|
Clone Library Name | barley_pub |
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 32.7 bits (73), Expect = 0.25 Identities = 18/31 (58%), Positives = 18/31 (58%) Frame = +2 Query: 155 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAV 247 MTTDQPVISL LFAPAFAV Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAV 31
>CEA_CITFR (P04480) Colicin-A| Length = 592 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 174 TGWSVVMAEGPEPDQGTAAARSTGNRRGAGEEIAEES 64 TGWS GPEP G + S G+ RG + ES Sbjct: 13 TGWSSERGSGPEPG-GGSHGNSGGHDRGDSSNVGNES 48
>KPCG_RAT (P63319) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| Length = 697 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360
>KPCG_RABIT (P10829) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| (PKC-delta) Length = 697 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360
>KPCG_MOUSE (P63318) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| Length = 697 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 360
>KPCG_BOVIN (P05128) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| (Fragment) Length = 682 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 309 IPSPSPSPTDSKRCFFGASPGR--LHISDFSFLMVLGKG 345
>KPCG_HUMAN (P05129) Protein kinase C gamma type (EC 2.7.11.13) (PKC-gamma)| Length = 697 Score = 27.7 bits (60), Expect = 8.2 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 146 VPNPTKAPRQLDRQGIGGAPGRKSRRNPSFFFLLLLGEG 30 +P+P+ +P R G +PGR F FL++LG+G Sbjct: 324 IPSPSPSPTDPKRCFFGASPGR--LHISDFSFLMVLGKG 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,491,276 Number of Sequences: 219361 Number of extensions: 449048 Number of successful extensions: 1311 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1311 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)