>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
           insert sequence
          Length = 4125

 Score =  149 bits (75), Expect = 7e-33
 Identities = 245/301 (81%), Gaps = 3/301 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 88
           ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 117 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 176

                                                                       
Query: 89  tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 148
           ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 177 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 236

                                                                       
Query: 149 agcaggcggcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 208
           |||||||| | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 237 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 296

                                                                       
Query: 209 agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 266
           |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 297 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 356

                                                                       
Query: 267 -cggcgcggtcaccaggcccgacgtcgtctctgacctcctcgtccgcttgcctaaggaat 325
            |||||| ||| | ||||||||||||  | ||||||||||||| ||||||||||||||||
Sbjct: 357 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaaggaat 416

            
Query: 326 g 326
           |
Sbjct: 417 g 417

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  141 bits (71), Expect = 2e-30
 Identities = 241/297 (81%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                           
Query: 29      actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 88
               ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 3359797 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 3359856

                                                                           
Query: 89      tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 148
               ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 3359857 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 3359916

                                                                           
Query: 149     agcaggcggcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 208
               |||||||| | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 3359917 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 3359976

                                                                           
Query: 209     agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 266
               |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 3359977 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 3360036

                                                                        
Query: 267     -cggcgcggtcaccaggcccgacgtcgtctctgacctcctcgtccgcttgcctaagg 322
                |||||| ||| | ||||||||||||  | ||||||||||||| |||||||||||||
Sbjct: 3360037 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 3360093

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  141 bits (71), Expect = 2e-30
 Identities = 241/297 (81%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                           
Query: 29      actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 88
               ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 3359742 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 3359801

                                                                           
Query: 89      tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 148
               ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 3359802 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 3359861

                                                                           
Query: 149     agcaggcggcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 208
               |||||||| | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 3359862 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 3359921

                                                                           
Query: 209     agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 266
               |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 3359922 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 3359981

                                                                        
Query: 267     -cggcgcggtcaccaggcccgacgtcgtctctgacctcctcgtccgcttgcctaagg 322
                |||||| ||| | ||||||||||||  | ||||||||||||| |||||||||||||
Sbjct: 3359982 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 3360038

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  141 bits (71), Expect = 2e-30
 Identities = 241/297 (81%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                         
Query: 29    actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 88
             ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 38850 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 38909

                                                                         
Query: 89    tccgcgccgccggggaggccaccgacgccgtcggggagctcatcaagagcgtgcctccgc 148
             ||||||||||  | |||||| | || ||||||| ||  ||| |||||||  | ||  |||
Sbjct: 38910 tccgcgccgcgagcgaggccgcggatgccgtcgcgggcctcgtcaagaggatcccgacgc 38969

                                                                         
Query: 149   agcaggcggcgccggaggctgcctcggggttcgtgagggacctgggcctcgcggccgaaa 208
             |||||||| | |  ||||||| | | |||||||||||||||||||| |||||||  || |
Sbjct: 38970 agcaggcgactcacgaggctgtcgctgggttcgtgagggacctggggctcgcgggggaga 39029

                                                                         
Query: 209   agctagcgttttccttccggccgccggaggtggtgcggctcgccgggagccacgcggc-- 266
             |||| |||||  | ||||||||||||||||| || ||| |||| ||||||||||||||  
Sbjct: 39030 agctcgcgttcacgttccggccgccggaggtcgttcgggtcgctgggagccacgcggccg 39089

                                                                      
Query: 267   -cggcgcggtcaccaggcccgacgtcgtctctgacctcctcgtccgcttgcctaagg 322
              |||||| ||| | ||||||||||||  | ||||||||||||| |||||||||||||
Sbjct: 39090 gcggcgccgtcgcgaggcccgacgtctccgctgacctcctcgtgcgcttgcctaagg 39146

>gb|AY573970.1| Oryza sativa (japonica cultivar-group) clone Tel FR4
           telomere-associated sequence
          Length = 219

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 29  actccatcgacctcaagctctccgagctcctcaagcaagcgcggccgagcgccacctctc 88
           ||||||||| |  |||||||||||  |||||| || | | ||||||||||||| || | |
Sbjct: 109 actccatcgtctacaagctctccgctctcctcgaggaggtgcggccgagcgccgccgcac 50

                     
Query: 89  tccgcgccgc 98
           ||||||||||
Sbjct: 49  tccgcgccgc 40

>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 234    ggaggtggtgcggctcgccggg 255
              ||||||||||||||||||||||
Sbjct: 220847 ggaggtggtgcggctcgccggg 220868

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 287    acgtcgtctctgacctcctcg 307
              |||||||||||||||||||||
Sbjct: 644272 acgtcgtctctgacctcctcg 644252

>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 239   tggtgcggctcgccgggagccacgc 263
             ||||||||||| |||||||||||||
Sbjct: 25330 tggtgcggctcaccgggagccacgc 25354

>gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of the complete genome
          Length = 12174

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   ggaggccaccgacgccgtcgggga 125
             |||||||| |||||||||||||||
Sbjct: 11083 ggaggccagcgacgccgtcgggga 11106

>ref|XM_475108.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ccgacgccgtcggggagctc 129
           ||||||||||||||||||||
Sbjct: 561 ccgacgccgtcggggagctc 542

>ref|XM_476719.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2457

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  ggccgccggaggtggtgcgg 246
            ||||||||||||||||||||
Sbjct: 2141 ggccgccggaggtggtgcgg 2160

>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence
          Length = 173430

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cgcaatggtctccgccgagt 28
             ||||||||||||||||||||
Sbjct: 82072 cgcaatggtctccgccgagt 82091

>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
             complete sequence
          Length = 148373

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccgacgccgtcggggagctc 129
             ||||||||||||||||||||
Sbjct: 47351 ccgacgccgtcggggagctc 47332

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 260    acgcggccggcgcggtcaccaggcccga 287
              ||||||||||||||| |||||| |||||
Sbjct: 462908 acgcggccggcgcggccaccagccccga 462935

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 51      cgagctcctcaagcaagcgc 70
               ||||||||||||||||||||
Sbjct: 1132109 cgagctcctcaagcaagcgc 1132090

>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ccgacgccgtcggggagctc 129
             ||||||||||||||||||||
Sbjct: 70411 ccgacgccgtcggggagctc 70430

>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 93     cgccgccggggaggccaccgacgccgtc 120
              ||||| ||| ||||||||||||||||||
Sbjct: 126207 cgccgacggcgaggccaccgacgccgtc 126234

>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccgacgccgtcggggagctc 129
             ||||||||||||||||||||
Sbjct: 61259 ccgacgccgtcggggagctc 61240

>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence
          Length = 144359

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccgacgccgtcggggagctc 129
             ||||||||||||||||||||
Sbjct: 45486 ccgacgccgtcggggagctc 45467

>gb|AC009470.4| Homo sapiens BAC clone RP11-125K7 from 11, complete sequence
          Length = 162511

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 252   cgggagccacgcggccggcgcggt 275
             |||||||| |||||||||||||||
Sbjct: 25639 cgggagccgcgcggccggcgcggt 25616

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 110      ccgacgccgtcggggagctc 129
                ||||||||||||||||||||
Sbjct: 19915603 ccgacgccgtcggggagctc 19915622

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 110     ccgacgccgtcggggagctc 129
               ||||||||||||||||||||
Sbjct: 3612645 ccgacgccgtcggggagctc 3612626

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 227     ggccgccggaggtggtgcgg 246
               ||||||||||||||||||||
Sbjct: 3518631 ggccgccggaggtggtgcgg 3518612

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 110      ccgacgccgtcggggagctc 129
                ||||||||||||||||||||
Sbjct: 17053984 ccgacgccgtcggggagctc 17053965

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 266     ccggcgcggtcaccaggccc 285
               ||||||||||||||||||||
Sbjct: 2770853 ccggcgcggtcaccaggccc 2770872

>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 77    gcgccacctctctccgcgccgccggggaggcc 108
             |||||||||| |||| ||||||||||||||||
Sbjct: 10012 gcgccacctc-ctccacgccgccggggaggcc 9982

>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0039H02
          Length = 169162

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   ggccgccggaggtggtgcgg 246
             ||||||||||||||||||||
Sbjct: 56581 ggccgccggaggtggtgcgg 56562

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 249     cgccgggagccacgcggccggcgc 272
               ||||||||||||||||| ||||||
Sbjct: 2628035 cgccgggagccacgcggtcggcgc 2628058

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 110     ccgacgccgtcggggagctc 129
               ||||||||||||||||||||
Sbjct: 3612566 ccgacgccgtcggggagctc 3612547

>dbj|AP001266.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-770G2, complete
              sequence
          Length = 175872

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 252    cgggagccacgcggccggcgcggt 275
              |||||||| |||||||||||||||
Sbjct: 117751 cgggagccgcgcggccggcgcggt 117728


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,930,766
Number of Sequences: 3902068
Number of extensions: 1930766
Number of successful extensions: 39606
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 38994
Number of HSP's gapped (non-prelim): 605
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)