>NCAP_IHNV (P19691) Nucleocapsid protein (Nucleoprotein)|
          Length = 413

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 25  LHSSDHQPPPASAPADPTRVLL 90
           +HSS+HQ PP   P DP+R LL
Sbjct: 388 IHSSEHQQPPLLPPLDPSRRLL 409

>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog|
          Length = 630

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 24/78 (30%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
 Frame = +1

Query: 40  HQPPPASAPADPTRVLLDSAPRNKKERPF*CLASXXXXXXXXXXXXXXQAAGTSA-SSAP 216
           H P P   P DP            +E PF  L S                 G +  SS+P
Sbjct: 253 HFPSPLPTPLDP------------EEPPFPALTSSSSTGSLAHLGVGGAGQGMNTPSSSP 300

Query: 217 NHRPASWAPSGWSTR*RR 270
            HRPA  +P   ST  RR
Sbjct: 301 QHRPAVVSPLSLSTEARR 318

>VE4_HPV04 (Q07852) Probable protein E4|
          Length = 181

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 1   IHTP*SSLLHSSDHQ-PPPASAPADPTRVLLDSAPRNKKERP 123
           +HTP  S L ++ +  PPPA+      R LL+   R    RP
Sbjct: 60  LHTPPPSTLRNNSYPGPPPATPKLPSRRALLEGGNRGNPTRP 101

>ASO_CUCPM (P37064) L-ascorbate oxidase (EC 1.10.3.3) (Ascorbase) (ASO)|
          Length = 552

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 19  SLLHSSDHQPPPASAPADPTRVLLDSAPRNKKER 120
           +LLH+ D  PPP   P D     +D+ P N+K R
Sbjct: 383 NLLHAFDQNPPPEVFPEDYD---IDTPPTNEKTR 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,401,735
Number of Sequences: 219361
Number of extensions: 700671
Number of successful extensions: 2317
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2315
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)