ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl33e02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475584.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2607 Score = 139 bits (70), Expect = 9e-30 Identities = 130/150 (86%) Strand = Plus / Plus Query: 173 gcaggagaaggcaggcagcaggaacaagcgcaagttccgcgccgaaccaccgtccggcga 232 |||||||||||| | ||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct: 48 gcaggagaaggcggcgagccggaacaagcgcaagtaccgcgccgagccgccgtccgccga 107 Query: 233 gctgggccccttcgggctggagtacccgctgacgacggactgcgtggggtttgagtttat 292 |||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||| || Sbjct: 108 gctggggtcattcgggctggagtacccactgacggccgactgcgtgggcttcgagttcat 167 Query: 293 gtcgcccgagaaggctgccatggcggcggc 322 |||||| |||||||| ||||| |||||||| Sbjct: 168 gtcgccggagaaggcagccatcgcggcggc 197 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 394 ccacagcggaggagctattagagtgtcagcgatatgtgaattgga 438 |||| |||||||||||| | ||||| ||| ||||||||||||||| Sbjct: 278 ccacggcggaggagctactggagtgccagagatatgtgaattgga 322
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 139 bits (70), Expect = 9e-30 Identities = 130/150 (86%) Strand = Plus / Minus Query: 173 gcaggagaaggcaggcagcaggaacaagcgcaagttccgcgccgaaccaccgtccggcga 232 |||||||||||| | ||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct: 1717 gcaggagaaggcggcgagccggaacaagcgcaagtaccgcgccgagccgccgtccgccga 1658 Query: 233 gctgggccccttcgggctggagtacccgctgacgacggactgcgtggggtttgagtttat 292 |||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||| || Sbjct: 1657 gctggggtcattcgggctggagtacccactgacggccgactgcgtgggcttcgagttcat 1598 Query: 293 gtcgcccgagaaggctgccatggcggcggc 322 |||||| |||||||| ||||| |||||||| Sbjct: 1597 gtcgccggagaaggcagccatcgcggcggc 1568 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 394 ccacagcggaggagctattagagtgtcagcgatatgtgaattgga 438 |||| |||||||||||| | ||||| ||| ||||||||||||||| Sbjct: 1487 ccacggcggaggagctactggagtgccagagatatgtgaattgga 1443
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 139 bits (70), Expect = 9e-30 Identities = 130/150 (86%) Strand = Plus / Minus Query: 173 gcaggagaaggcaggcagcaggaacaagcgcaagttccgcgccgaaccaccgtccggcga 232 |||||||||||| | ||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct: 2326117 gcaggagaaggcggcgagccggaacaagcgcaagtaccgcgccgagccgccgtccgccga 2326058 Query: 233 gctgggccccttcgggctggagtacccgctgacgacggactgcgtggggtttgagtttat 292 |||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||| || Sbjct: 2326057 gctggggtcattcgggctggagtacccactgacggccgactgcgtgggcttcgagttcat 2325998 Query: 293 gtcgcccgagaaggctgccatggcggcggc 322 |||||| |||||||| ||||| |||||||| Sbjct: 2325997 gtcgccggagaaggcagccatcgcggcggc 2325968 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 394 ccacagcggaggagctattagagtgtcagcgatatgtgaattgga 438 |||| |||||||||||| | ||||| ||| ||||||||||||||| Sbjct: 2325887 ccacggcggaggagctactggagtgccagagatatgtgaattgga 2325843
>dbj|AK103601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133F19, full insert sequence Length = 2987 Score = 139 bits (70), Expect = 9e-30 Identities = 130/150 (86%) Strand = Plus / Plus Query: 173 gcaggagaaggcaggcagcaggaacaagcgcaagttccgcgccgaaccaccgtccggcga 232 |||||||||||| | ||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct: 268 gcaggagaaggcggcgagccggaacaagcgcaagtaccgcgccgagccgccgtccgccga 327 Query: 233 gctgggccccttcgggctggagtacccgctgacgacggactgcgtggggtttgagtttat 292 |||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||| || Sbjct: 328 gctggggtcattcgggctggagtacccactgacggccgactgcgtgggcttcgagttcat 387 Query: 293 gtcgcccgagaaggctgccatggcggcggc 322 |||||| |||||||| ||||| |||||||| Sbjct: 388 gtcgccggagaaggcagccatcgcggcggc 417 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 394 ccacagcggaggagctattagagtgtcagcgatatgtgaattgga 438 |||| |||||||||||| | ||||| ||| ||||||||||||||| Sbjct: 498 ccacggcggaggagctactggagtgccagagatatgtgaattgga 542
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 139 bits (70), Expect = 9e-30 Identities = 130/150 (86%) Strand = Plus / Minus Query: 173 gcaggagaaggcaggcagcaggaacaagcgcaagttccgcgccgaaccaccgtccggcga 232 |||||||||||| | ||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct: 54032 gcaggagaaggcggcgagccggaacaagcgcaagtaccgcgccgagccgccgtccgccga 53973 Query: 233 gctgggccccttcgggctggagtacccgctgacgacggactgcgtggggtttgagtttat 292 |||||| | ||||||||||||||||| |||||| | ||||||||||| || ||||| || Sbjct: 53972 gctggggtcattcgggctggagtacccactgacggccgactgcgtgggcttcgagttcat 53913 Query: 293 gtcgcccgagaaggctgccatggcggcggc 322 |||||| |||||||| ||||| |||||||| Sbjct: 53912 gtcgccggagaaggcagccatcgcggcggc 53883 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 394 ccacagcggaggagctattagagtgtcagcgatatgtgaattgga 438 |||| |||||||||||| | ||||| ||| ||||||||||||||| Sbjct: 53802 ccacggcggaggagctactggagtgccagagatatgtgaattgga 53758
>ref|XM_468218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 193 ggaacaagcgcaagttccgcgccgaaccaccgtccggcgagctgggccccttcgggctgg 252 |||||||||||||| ||| ||||| || ||||||| ||| ||||| | ||| | |||| Sbjct: 309 ggaacaagcgcaagcaccgtgccgagccgccgtccgccgaactggggtcattcagactgg 250 Query: 253 agtacccgctgacgacggactgcgtggggtttgagtttatgtcgcccgagaaggc 307 ||| ||| || |||||||| |||||||| || || || |||||||| |||||||| Sbjct: 249 agtgcccactaacgacggattgcgtgggcttcgacttcatgtcgccggagaaggc 195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 193 ggaacaagcgcaagttccgcgccgaaccaccgtccggcgagctgggccccttcgggctgg 252 |||||||||||||| ||| ||||| || ||||||| ||| ||||| | ||| | |||| Sbjct: 33653759 ggaacaagcgcaagcaccgtgccgagccgccgtccgccgaactggggtcattcagactgg 33653700 Query: 253 agtacccgctgacgacggactgcgtggggtttgagtttatgtcgcccgagaaggc 307 ||| ||| || |||||||| |||||||| || || || |||||||| |||||||| Sbjct: 33653699 agtgcccactaacgacggattgcgtgggcttcgacttcatgtcgccggagaaggc 33653645
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 193 ggaacaagcgcaagttccgcgccgaaccaccgtccggcgagctgggccccttcgggctgg 252 |||||||||||||| ||| ||||| || ||||||| ||| ||||| | ||| | |||| Sbjct: 22166 ggaacaagcgcaagcaccgtgccgagccgccgtccgccgaactggggtcattcagactgg 22107 Query: 253 agtacccgctgacgacggactgcgtggggtttgagtttatgtcgcccgagaaggc 307 ||| ||| || |||||||| |||||||| || || || |||||||| |||||||| Sbjct: 22106 agtgcccactaacgacggattgcgtgggcttcgacttcatgtcgccggagaaggc 22052
>dbj|AK109282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B11, full insert sequence Length = 525 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 193 ggaacaagcgcaagttccgcgccgaaccaccgtccggcgagctgggccccttcgggctgg 252 |||||||||||||| ||| ||||| || ||||||| ||| ||||| | ||| | |||| Sbjct: 309 ggaacaagcgcaagcaccgtgccgagccgccgtccgccgaactggggtcattcagactgg 250 Query: 253 agtacccgctgacgacggactgcgtggggtttgagtttatgtcgcccgagaaggc 307 ||| ||| || |||||||| |||||||| || || || |||||||| |||||||| Sbjct: 249 agtgcccactaacgacggattgcgtgggcttcgacttcatgtcgccggagaaggc 195
>gb|AY650320.1| Macaca fascicularis achaete-scute complex protein 1 mRNA, partial cds Length = 671 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 122 gcggcggccgccgctgctgctg 101
>ref|NM_184805.1| Oryza sativa (japonica cultivar-group), mRNA Length = 696 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcggccgc 325 ||||||||||| |||||||||||||| Sbjct: 415 gagaaggctgcaatggcggcggccgc 440
>ref|NM_197071.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.26), mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 gatcaccagccgccgcccgcctcggccccc 66 ||||||| |||||||||||||||| ||||| Sbjct: 88 gatcacccgccgccgcccgcctcgaccccc 117
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 300 gagaaggctgccatggcggcggccgc 325 ||||||||||| |||||||||||||| Sbjct: 22025302 gagaaggctgcaatggcggcggccgc 22025277 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 29330770 cggcggccgccgctgctgctg 29330750 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 26730419 gccatggcggcggccgccgc 26730400
>ref|XM_985007.1| PREDICTED: Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller) (Cdc2l5), mRNA Length = 4449 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 687 gcggcggccgccgctgctgctg 666
>ref|XM_919376.2| PREDICTED: Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller), transcript variant 23 (Cdc2l5), mRNA Length = 7138 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 1220 gcggcggccgccgctgctgctg 1199
>ref|XM_905364.2| PREDICTED: Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller), transcript variant 12 (Cdc2l5), mRNA Length = 7223 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 1125 gcggcggccgccgctgctgctg 1104
>ref|XM_898114.2| PREDICTED: Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller), transcript variant 11 (Cdc2l5), mRNA Length = 7129 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 1220 gcggcggccgccgctgctgctg 1199
>ref|XM_127221.7| PREDICTED: Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller), transcript variant 1 (Cdc2l5), mRNA Length = 7214 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 1125 gcggcggccgccgctgctgctg 1104
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 gatcaccagccgccgcccgcctcggccccc 66 ||||||| |||||||||||||||| ||||| Sbjct: 126858 gatcacccgccgccgcccgcctcgaccccc 126887
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 37 gatcaccagccgccgcccgcctcggccccc 66 ||||||| |||||||||||||||| ||||| Sbjct: 17805183 gatcacccgccgccgcccgcctcgaccccc 17805154
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 300 gagaaggctgccatggcggcggccgc 325 ||||||||||| |||||||||||||| Sbjct: 22018331 gagaaggctgcaatggcggcggccgc 22018306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 29422192 cggcggccgccgctgctgctg 29422172 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 26821742 gccatggcggcggccgccgc 26821723
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence Length = 185573 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 ggagaaggcaggcagcaggaac 197 |||||||||||||||||||||| Sbjct: 37887 ggagaaggcaggcagcaggaac 37866
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcggccgc 325 ||||||||||| |||||||||||||| Sbjct: 122980 gagaaggctgcaatggcggcggccgc 123005
>ref|XM_225404.3| PREDICTED: Rattus norvegicus cell division cycle 2-like 5 (cholinesterase-related cell division controller) (predicted) (Cdc2l5_predicted), mRNA Length = 4143 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 381 gcggcggccgccgctgctgctg 360
>gb|DQ196189.1| Triticum aestivum cultivar WH 542 cystatin gene, partial sequence Length = 1006 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcgg 321 |||||||||||||||||||||| Sbjct: 75 gagaaggctgccatggcggcgg 96
>dbj|AK173265.1| Mus musculus mRNA for mKIAA1791 protein Length = 5385 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 1220 gcggcggccgccgctgctgctg 1199
>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence Length = 138426 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 315 gcggcggccgccgctgctgctg 336 |||||||||||||||||||||| Sbjct: 87083 gcggcggccgccgctgctgctg 87104
>dbj|AK073603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052N01, full insert sequence Length = 1413 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcggccgc 325 ||||||||||| |||||||||||||| Sbjct: 220 gagaaggctgcaatggcggcggccgc 245
>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence Length = 182204 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 ggagaaggcaggcagcaggaac 197 |||||||||||||||||||||| Sbjct: 24568 ggagaaggcaggcagcaggaac 24589
>gb|U40215.1|HSU40215 Human synapsin IIb mRNA, complete cds Length = 2074 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgccg 70 |||||||||||||||||| ||||||| Sbjct: 239 gccgccgcccgcctcggcgcccgccg 264
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 37 gatcaccagccgccgcccgcctcggccccc 66 ||||||| |||||||||||||||| ||||| Sbjct: 17814436 gatcacccgccgccgcccgcctcgaccccc 17814407
>gb|DQ279931.1| Triticum aestivum genotype WH-542 cystatin WC-4 mRNA, complete cds Length = 538 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcgg 321 |||||||||||||||||||||| Sbjct: 198 gagaaggctgccatggcggcgg 219
>gb|DQ279930.1| Triticum aestivum genotype HD-29 cystatin WC-4 mRNA, complete cds Length = 538 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcgg 321 |||||||||||||||||||||| Sbjct: 198 gagaaggctgccatggcggcgg 219
>dbj|AB038393.1| Triticum aestivum WC4 mRNA for cysteine proteinase inhibitor, complete cds Length = 720 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 gagaaggctgccatggcggcgg 321 |||||||||||||||||||||| Sbjct: 209 gagaaggctgccatggcggcgg 230
>ref|NM_214014.1| Sus scrofa forkhead/winged helix transcription factor FOXO1a (FOXO1A), mRNA Length = 2162 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 335 ggcggcggccgccgctgctgc 355
>ref|XM_469601.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1097 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 184 cggcggccgccgctgctgctg 164
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 agaaggctgccatggcggcggccgc 325 |||||||||| |||||||||||||| Sbjct: 102316 agaaggctgcaatggcggcggccgc 102340
>gb|AY679523.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5) gene, complete cds Length = 148952 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 2798 cggcggccgccgctgctgctg 2778
>ref|XM_585432.2| PREDICTED: Bos taurus similar to Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2) (ALDH1) (ALDH-E2) (LOC508629), mRNA Length = 2260 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgcc 69 ||||||||||||||||| ||||||| Sbjct: 101 gccgccgcccgcctcggaccccgcc 125
>gb|BC116084.1| Bos taurus cDNA clone MGC:138997 IMAGE:8094240, complete cds Length = 2068 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgcc 69 ||||||||||||||||| ||||||| Sbjct: 106 gccgccgcccgcctcggaccccgcc 130
>ref|NM_024496.2| Homo sapiens chromosome 14 open reading frame 4 (C14orf4), mRNA Length = 4166 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 1196 ggcggcggccgccgctgctgc 1176
>gb|AC072061.8| Homo sapiens BAC clone RP11-467D6 from 7, complete sequence Length = 167852 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 84993 cggcggccgccgctgctgctg 84973
>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete sequence Length = 139788 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 25230 cggcggccgccgctgctgctg 25250
>emb|AJ277365.1|HSA277365 Homo sapiens polyglutamine-containing C14ORF4 gene Length = 4959 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 1304 ggcggcggccgccgctgctgc 1284
>ref|XM_533082.2| PREDICTED: Canis familiaris similar to Cell division cycle 2-like protein kinase 5 (CDC2-related protein kinase 5) (Cholinesterase-related cell division controller) (LOC475874), mRNA Length = 5826 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 844 cggcggccgccgctgctgctg 824
>ref|NM_031267.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5), transcript variant 2, mRNA Length = 5066 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 905 cggcggccgccgctgctgctg 885
>ref|NM_003718.2| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5), transcript variant 1, mRNA Length = 5246 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 905 cggcggccgccgctgctgctg 885
>gb|BC080601.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller), mRNA (cDNA clone IMAGE:4908582) Length = 2525 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 1378 cggcggccgccgctgctgctg 1358
>emb|AJ297710.1|HSA297710 Homo sapiens mRNA for CDC2L5 protein kinase, (CDC2L5 gene), isoform 2 Length = 5066 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 905 cggcggccgccgctgctgctg 885
>emb|AJ297709.1|HSA297709 Homo sapiens mRNA for CDC2L5 protein kinase, (CDC2L5 gene), isoform 1 Length = 5246 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 905 cggcggccgccgctgctgctg 885
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gagcggcctttctgatgtcta 135 ||||||||||||||||||||| Sbjct: 1545520 gagcggcctttctgatgtcta 1545540
>dbj|AK092534.1| Homo sapiens cDNA FLJ35215 fis, clone PROST2000079, highly similar to Homo sapiens mRNA for CDC2L5 protein kinase, (CDC2L5 gene), isoform 1 Length = 2184 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 1055 cggcggccgccgctgctgctg 1035
>gb|AY094061.1| Sus scrofa forkhead/winged helix transcription factor FOXO1a (foxo1a) mRNA, complete cds Length = 2162 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 335 ggcggcggccgccgctgctgc 355
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ccgccgcccgcctcggcccccgccg 70 ||||||||||||||||| ||||||| Sbjct: 26090089 ccgccgcccgcctcggctcccgccg 26090113
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 agaaggctgccatggcggcggccgc 325 |||||||||| |||||||||||||| Sbjct: 28143761 agaaggctgcaatggcggcggccgc 28143785 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 |||||||||||||||| ||||||| Sbjct: 26849201 tggcggcggccgccgcggctgctg 26849224
>gb|AC012370.8| Homo sapiens BAC clone RP11-568D19 from 2, complete sequence Length = 105362 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gcggcggccgccgctgctgct 335 ||||||||||||||||||||| Sbjct: 63819 gcggcggccgccgctgctgct 63799
>gb|AC007686.5|AC007686 Homo sapiens chromosome 14 clones CTD-2289B16, RP11-116N21, RP11-7F17, complete sequence Length = 181386 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 89920 ggcggcggccgccgctgctgc 89940
>dbj|AK025500.1| Homo sapiens cDNA: FLJ21847 fis, clone HEP01910 Length = 1917 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 397 cggcggccgccgctgctgctg 377
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ccgccgcccgcctcggcccccgccg 70 ||||||||||||||||| ||||||| Sbjct: 1313 ccgccgcccgcctcggctcccgccg 1337
>dbj|AK099346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L03, full insert sequence Length = 1872 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 agaaggctgccatggcggcggccgc 325 |||||||||| |||||||||||||| Sbjct: 411 agaaggctgcaatggcggcggccgc 435
>dbj|AK068587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F04, full insert sequence Length = 1098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 cggcggccgccgctgctgctg 336 ||||||||||||||||||||| Sbjct: 185 cggcggccgccgctgctgctg 165
>dbj|AK064388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F06, full insert sequence Length = 1911 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 agaaggctgccatggcggcggccgc 325 |||||||||| |||||||||||||| Sbjct: 434 agaaggctgcaatggcggcggccgc 458
>gb|AF077737.1|AF077737 Homo sapiens synapsin IIb (SYN2) mRNA, complete cds Length = 1841 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 agccgccgcccgcctcggcccccgc 68 ||||||||||||||||||| ||||| Sbjct: 203 agccgccgcccgcctcggcgcccgc 227
>gb|AF077671.1|AF077671 Homo sapiens synapsin IIa (SYN2) mRNA, complete cds Length = 1882 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 agccgccgcccgcctcggcccccgc 68 ||||||||||||||||||| ||||| Sbjct: 203 agccgccgcccgcctcggcgcccgc 227
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 298 ccgagaaggctgccatggcggcggccgcc 326 ||||||||||||| | ||||||||||||| Sbjct: 1552047 ccgagaaggctgcgaaggcggcggccgcc 1552019
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 agaaggctgccatggcggcggccgc 325 |||||||||| |||||||||||||| Sbjct: 28128639 agaaggctgcaatggcggcggccgc 28128663 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 |||||||||||||||| ||||||| Sbjct: 27176254 tggcggcggccgccgcggctgctg 27176277
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ccgccgcccgcctcggcccccgccg 70 ||||||||||||||||| ||||||| Sbjct: 26018265 ccgccgcccgcctcggctcccgccg 26018289
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 ccgccgcccgcctcggcccccgccg 70 ||||||||||||||||| ||||||| Sbjct: 21582 ccgccgcccgcctcggctcccgccg 21558
>gb|BC108292.1| Homo sapiens cDNA clone IMAGE:30338685 Length = 4203 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ggcggcggccgccgctgctgc 334 ||||||||||||||||||||| Sbjct: 1204 ggcggcggccgccgctgctgc 1184
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 3101323 gccatggcggcggccgccgc 3101342
>ref|XM_529558.1| PREDICTED: Pan troglodytes LOC452498 (LOC452498), mRNA Length = 745 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggcggcggccgccgctgctgctg 336 ||||||||||||| |||||||||| Sbjct: 329 tggcggcggccgcggctgctgctg 306
>ref|XM_474174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 420 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gccgccgctgctgctgagag 340 |||||||||||||||||||| Sbjct: 198 gccgccgctgctgctgagag 179
>ref|NM_003178.3| Homo sapiens synapsin II (SYN2), transcript variant IIb, mRNA Length = 3899 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 |||||||||||||||||| ||||| Sbjct: 345 gccgccgcccgcctcggcgcccgc 368
>ref|NM_133625.2| Homo sapiens synapsin II (SYN2), transcript variant IIa, mRNA Length = 2694 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 |||||||||||||||||| ||||| Sbjct: 345 gccgccgcccgcctcggcgcccgc 368
>gb|AC109244.11| Mus musculus chromosome 15, clone RP23-459E13, complete sequence Length = 183400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gaaggcaggcagcaggaaca 198 |||||||||||||||||||| Sbjct: 89774 gaaggcaggcagcaggaaca 89755
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctgccatggcggcggccgcc 326 |||||||||||||||||||| Sbjct: 837386 ctgccatggcggcggccgcc 837405
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 103793 gccatggcggcggccgccgc 103812
>gb|AC103371.9| Mus musculus chromosome 5, clone RP24-399A15, complete sequence Length = 122682 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 7212 gccgccgcccgcctcggccc 7193
>gb|BC092223.1| Mus musculus cDNA sequence BC036313, mRNA (cDNA clone IMAGE:6854578), with apparent retained intron Length = 4877 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 78 ggcggccgccgctgctgctg 59
>ref|XM_864531.1| PREDICTED: Bos taurus similar to acyl-malonyl condensing enzyme (LOC516150), mRNA Length = 1434 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgccgctgctgctgagag 340 |||||||||||||||||||| Sbjct: 258 gccgccgctgctgctgagag 277
>gb|BC051307.1| Homo sapiens synapsin II, transcript variant IIa, mRNA (cDNA clone MGC:59674 IMAGE:5802100), complete cds Length = 2682 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 |||||||||||||||||| ||||| Sbjct: 333 gccgccgcccgcctcggcgcccgc 356
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 1765689 gccgccgcccgcctcggccc 1765670
>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence Length = 181842 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 66795 ggcggccgccgctgctgctg 66814
>ref|XM_993808.1| PREDICTED: Mus musculus hypothetical protein LOC676890 (LOC676890), mRNA Length = 729 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 197 gccgccgcccgcctcggccc 216
>ref|XM_923288.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 12 (BC067047), mRNA Length = 3881 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgcaggagaaggcaggcagcagga 195 |||||||| ||||||||||||||| Sbjct: 676 tgcaggagtaggcaggcagcagga 653
>ref|XM_902965.2| PREDICTED: Mus musculus cDNA sequence BC067047, transcript variant 4 (BC067047), mRNA Length = 3881 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgcaggagaaggcaggcagcagga 195 |||||||| ||||||||||||||| Sbjct: 676 tgcaggagtaggcaggcagcagga 653
>ref|XM_386943.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06767.1) partial mRNA Length = 1080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ggcggcggccgccgctgctg 333 |||||||||||||||||||| Sbjct: 663 ggcggcggccgccgctgctg 682
>gb|AC022168.6| Homo sapiens chromosome 16 clone RP11-89D3, complete sequence Length = 177322 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 8142 cctcccttctccactcctct 8123
>gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome 6, complete sequence Length = 190224 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 94606 cctcccttctccactcctct 94625
>ref|XM_862048.1| PREDICTED: Canis familiaris similar to BarH-like 2, transcript variant 2 (LOC611092), mRNA Length = 1194 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 ||||||||||||| |||||||||| Sbjct: 282 gccgccgcccgccgcggcccccgc 305
>ref|XM_762141.1| Giardia lamblia ATCC 50803 ankyrin (GLP_113_13825_15633) partial mRNA Length = 1809 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 gagcacctgtgatgcctgca 381 |||||||||||||||||||| Sbjct: 1047 gagcacctgtgatgcctgca 1028
>gb|AC163214.4| Mus musculus chromosome 5, clone RP23-467O1, complete sequence Length = 200882 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 170484 gccgccgcccgcctcggccc 170465
>gb|BT022144.1| Drosophila melanogaster IP01479 full insert cDNA Length = 3034 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 439 ggcggccgccgctgctgctg 420
>emb|AL139004.11| Human DNA sequence from clone RP11-398O19 on chromosome 13 Contains the 3' end of the ATP8A2 gene for ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2 (ML-1 protein (IB, ATP, ML-1, ATPIB, DKFZP434B1913)), a novel gene (LOC222477)(similar to hypothetical protein BC024118), a novel gene and a CpG island, complete sequence Length = 50685 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 ||||||||||||| |||||||||| Sbjct: 29517 tggcggcggccgcggctgctgctg 29540
>emb|AL031602.14|HS1174N9 Human DNA sequence from clone RP5-1174N9 on chromosome 1p34.1-35.3 Contains the gene for a novel protein (FLJ90005) and two CpG islands, complete sequence Length = 72930 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 cagccgccgcccgcctcggcccccgccg 70 ||||||||||||||| ||||||| |||| Sbjct: 14489 cagccgccgcccgccccggcccctgccg 14516
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 gcccgcctcggcccccgccgatcc 74 |||||||||||| ||||||||||| Sbjct: 11194 gcccgcctcggcgcccgccgatcc 11171
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 3100811 gccgccgcccgcctcggccc 3100792
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgccgctgctgctgagag 340 |||||||||||||||||||| Sbjct: 117188 gccgccgctgctgctgagag 117207
>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete sequence Length = 198743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 137399 cctcccttctccactcctct 137380
>emb|AJ720776.1| Gallus gallus mRNA for hypothetical protein, clone 25f21 Length = 2590 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 13 ggcggccgccgctgctgctg 32
>gb|AC131566.1| Homo sapiens chromosome 16 clone RP11-141N14, complete sequence Length = 91907 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 62708 cctcccttctccactcctct 62689
>ref|NM_078662.2| Drosophila melanogaster BarH2 CG5488-RA (B-H2), mRNA Length = 3089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 532 ggcggccgccgctgctgctg 513
>gb|AC007596.7| Homo sapiens chromosome 16 clone RP11-116B6, complete sequence Length = 186210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 35193 cctcccttctccactcctct 35174
>dbj|AK156208.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830011O16 product:hypothetical Leucine-rich region profile/DH domain containing protein, full insert sequence Length = 2939 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgcaggagaaggcaggcagcagga 195 |||||||| ||||||||||||||| Sbjct: 663 tgcaggagtaggcaggcagcagga 640
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggcggcggccgccgctgctgctg 336 |||||||||||||||| ||||||| Sbjct: 96705 tggcggcggccgccgcggctgctg 96682
>gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone BACR01K05, complete sequence Length = 162761 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 87776 ggcggccgccgctgctgctg 87795
>dbj|AK148355.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370107J10 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, ribonuclease inhibitor subtype containing protein, full insert sequence Length = 2868 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 174 ggcggccgccgctgctgctg 155
>dbj|AK147478.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1050D22 product:Autism susceptibility gene 2 protein homolog [Homo sapiens], full insert sequence Length = 7408 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 95 gccgccgcccgcctcggccc 76
>ref|XM_944614.1| PREDICTED: Homo sapiens hypothetical protein LOC651350 (LOC651350), mRNA Length = 639 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 ||||||||||||| |||||||||| Sbjct: 182 tggcggcggccgcggctgctgctg 205
>ref|XM_933658.1| PREDICTED: Homo sapiens hypothetical protein LOC646496 (LOC646496), mRNA Length = 642 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 ||||||||||||| |||||||||| Sbjct: 182 tggcggcggccgcggctgctgctg 205
>ref|NM_001024645.1| Mus musculus cDNA sequence BC036313 (BC036313), mRNA Length = 4620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 151 ggcggccgccgctgctgctg 132
>dbj|AK158466.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930118J21 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, ribonuclease inhibitor subtype containing protein, full insert sequence Length = 5088 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 414 ggcggccgccgctgctgctg 395
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence Length = 198264 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 |||||||||||||||||| ||||| Sbjct: 110404 gccgccgcccgcctcggcgcccgc 110427
>gb|AY378700.1| Nilaparvata lugens clone Nla3A nicotinic acetylcholine receptor alpha 3 subunit mRNA, complete cds, alternatively spliced Length = 2584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gctgccatggcggcggccgc 325 |||||||||||||||||||| Sbjct: 1810 gctgccatggcggcggccgc 1791
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 2248690 gccgccgcccgcctcggccc 2248671
>gb|AC012096.8|AC012096 Drosophila melanogaster, chromosome X, region 15E-15F, BAC clone BACR18O02, complete sequence Length = 177793 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 163438 ggcggccgccgctgctgctg 163419
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 27421 gccatggcggcggccgccgc 27440
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgccgctgctgctgagag 340 |||||||||||||||||||| Sbjct: 33471309 gccgccgctgctgctgagag 33471328
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcccgcctcggcccccgcc 69 |||||||||||||||||||| Sbjct: 19917116 cgcccgcctcggcccccgcc 19917135
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gccgccgcccgcctcggccc 64 |||||||||||||||||||| Sbjct: 1108602 gccgccgcccgcctcggccc 1108583
>gb|AC133565.5| Homo sapiens chromosome 16 clone RP11-895K13, complete sequence Length = 168538 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctcccttctccactcctct 36 |||||||||||||||||||| Sbjct: 12820 cctcccttctccactcctct 12839
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cgcccgcctcggcccccgcc 69 |||||||||||||||||||| Sbjct: 81766 cgcccgcctcggcccccgcc 81785
>gb|BC082805.1| Mus musculus cDNA sequence BC036313, mRNA (cDNA clone IMAGE:30354704), with apparent retained intron Length = 4784 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 71 ggcggccgccgctgctgctg 52
>dbj|AK131164.1| Mus musculus premature mRNA for mFLJ00240 protein Length = 4647 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 153 ggcggccgccgctgctgctg 134
>gb|AY378701.1| Nilaparvata lugens clone Nla3B nicotinic acetylcholine receptor alpha 3 subunit mRNA, complete cds, alternatively spliced Length = 2323 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gctgccatggcggcggccgc 325 |||||||||||||||||||| Sbjct: 1549 gctgccatggcggcggccgc 1530
>dbj|AK110985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D03, full insert sequence Length = 1747 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccatggcggcggccgccgc 328 |||||||||||||||||||| Sbjct: 132 gccatggcggcggccgccgc 113
>dbj|AK108918.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H05, full insert sequence Length = 963 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggcggcggccgccgctgctgctg 336 |||||||||||||||| ||||||| Sbjct: 203 tggcggcggccgccgcggctgctg 180
>dbj|AK066260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H13, full insert sequence Length = 1451 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 tggcggcggccgccgctgctgctg 336 |||||||||||||||| ||||||| Sbjct: 973 tggcggcggccgccgcggctgctg 996
>gb|M82884.1|DROBARH2 Drosophila melanogaster dual bar protein (BarH2) mRNA, complete cds Length = 3088 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 533 ggcggccgccgctgctgctg 514
>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete sequence Length = 314205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 78623 ggcggccgccgctgctgctg 78604
>emb|AL133238.3|CNS01DUB Human chromosome 14 DNA sequence BAC C-2510G9 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185132 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccgcccgcctcggcccccgc 68 |||||||||||||||||||| Sbjct: 37517 ccgcccgcctcggcccccgc 37536
>gb|AY275158.1| Leptographium wingfieldii strain WIN(M)1209 mitochondrial large subunit ribosomal RNA, intron sequence Length = 367 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gtgcaggagaaggcaggcag 190 |||||||||||||||||||| Sbjct: 162 gtgcaggagaaggcaggcag 143
>dbj|AP001994.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215D10, complete sequence Length = 167376 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tgcaggagaaggcaggcagc 191 |||||||||||||||||||| Sbjct: 114022 tgcaggagaaggcaggcagc 114003
>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence Length = 224638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ggcggccgccgctgctgctg 336 |||||||||||||||||||| Sbjct: 169922 ggcggccgccgctgctgctg 169941
>gb|AY609586.1| Sus scrofa clone Clu_20020.scr.msk.p1.Contig2, mRNA sequence Length = 1126 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 ccagccgccgcccgcctcggcccc 65 ||||||||||||| |||||||||| Sbjct: 217 ccagccgccgccctcctcggcccc 194
>gb|AY823265.1| Hypocrea jecorina white collar 2 (WC2) gene, complete cds Length = 1700 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ggcggcggccgccgctgctgctga 337 |||||||||||| ||||||||||| Sbjct: 1080 ggcggcggccgctgctgctgctga 1057
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgccgctgctgctgagag 340 |||||||||||||||||||| Sbjct: 47498 gccgccgctgctgctgagag 47517
>dbj|AB209088.1| Homo sapiens mRNA for synapsin II isoform IIb variant protein Length = 3835 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 gccgccgcccgcctcggcccccgc 68 |||||||||||||||||| ||||| Sbjct: 293 gccgccgcccgcctcggcgcccgc 316
>emb|AL732357.3| Mouse DNA sequence from clone RP23-383K1 on chromosome 2, complete sequence Length = 101531 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 tgcaggagaaggcaggcagcagga 195 |||||||| ||||||||||||||| Sbjct: 24957 tgcaggagtaggcaggcagcagga 24980 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,823,031 Number of Sequences: 3902068 Number of extensions: 3823031 Number of successful extensions: 129283 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127644 Number of HSP's gapped (non-prelim): 1637 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
