ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl33e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, compl... 46 0.092
2gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosom... 44 0.37
3gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosom... 44 0.37
4emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on ch... 44 0.37
5gb|AC154251.2| Mus musculus BAC clone RP24-196G20 from chromosom... 44 0.37
6gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, com... 44 0.37
7emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on ch... 44 0.37
8gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome... 44 0.37
9gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome... 42 1.4
10gb|AC112866.5| Rattus norvegicus 1 BAC CH230-375M13 (Children's ... 42 1.4
11emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chr... 42 1.4
12ref|XM_775212.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.4
13gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, co... 42 1.4
14gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, compl... 42 1.4
15emb|AL845164.5| Mouse DNA sequence from clone RP23-286G12 on chr... 42 1.4
16gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, co... 40 5.7
17gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, co... 40 5.7
18gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, co... 40 5.7
19gb|AC166815.6| Mus musculus chromosome 18, clone RP23-373L14, co... 40 5.7
20gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, com... 40 5.7
21gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co... 40 5.7
22gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, co... 40 5.7
23gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 40 5.7
24gb|AC146390.4| Pan troglodytes BAC clone RP43-145D14 from 7, com... 40 5.7
25gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome... 40 5.7
26gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome... 40 5.7
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.7
28gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome ... 40 5.7
29gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, comp... 40 5.7
30gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosom... 40 5.7
31gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome... 40 5.7
32gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, co... 40 5.7
33gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, com... 40 5.7
34emb|CR339059.15| Zebrafish DNA sequence from clone CH211-121I18 ... 40 5.7
35emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in l... 40 5.7
36gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, compl... 40 5.7
37gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Ho... 40 5.7
38emb|AL161936.15| Human DNA sequence from clone RP11-48B24 on chr... 40 5.7
39gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, com... 40 5.7
40gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Ho... 40 5.7
41emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in... 40 5.7
42emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in ... 40 5.7
43emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chr... 40 5.7
44gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 40 5.7
45emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in ... 40 5.7
46emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in ... 40 5.7
47gb|AF351386.1| Gossypium hirsutum clone JESPR148 microsatellite ... 40 5.7
48gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosom... 40 5.7
49gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 40 5.7
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
51dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
53gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7... 40 5.7
54gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence 40 5.7
55gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 5.7
56dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
57emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chro... 40 5.7
58emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chr... 40 5.7
59gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, co... 40 5.7
60gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, compl... 40 5.7
61emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 ... 40 5.7
62emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in ... 40 5.7
63gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, co... 40 5.7
64gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, co... 40 5.7
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
66gb|AC161148.7| Mus musculus BAC clone RP23-358L5 from chromosome... 40 5.7
67emb|AL954349.10| Mouse DNA sequence from clone RP24-408O24 on ch... 40 5.7
68emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 40 5.7
69emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chr... 40 5.7
70emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on ch... 40 5.7
71gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, comple... 40 5.7
72emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on ch... 40 5.7
73gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 40 5.7
74gb|AY285165.1| Sus scrofa clone UMNp1000.gcg microsatellite sequ... 40 5.7
75emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chr... 40 5.7
76emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chrom... 40 5.7
77emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chr... 40 5.7
78dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix ... 40 5.7

>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence
          Length = 233864

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 252   actccctccctctccctcttctc 274
             |||||||||||||||||||||||
Sbjct: 80284 actccctccctctccctcttctc 80262



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>gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosome 17, complete sequence
          Length = 188307

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 253    ctccctccctctccctcttctc 274
              ||||||||||||||||||||||
Sbjct: 186010 ctccctccctctccctcttctc 186031



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>gb|AC122536.4| Mus musculus BAC clone RP24-542K22 from chromosome 17, complete sequence
          Length = 150022

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 253    ctccctccctctccctcttctc 274
              ||||||||||||||||||||||
Sbjct: 116786 ctccctccctctccctcttctc 116765



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>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a
              novel gene, a non-POU domain containing octamer-binding
              protein (Nono) pseudogene, a Sin3-associated polypeptide 18
              (Sap18) pseudogene, the 5' end of a novel gene and a CpG
              island, complete sequence
          Length = 209175

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 249    aaaactccctccctctccctct 270
              ||||||||||||||||||||||
Sbjct: 159584 aaaactccctccctctccctct 159605



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>gb|AC154251.2| Mus musculus BAC clone RP24-196G20 from chromosome 16, complete
             sequence
          Length = 164980

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 253   ctccctccctctccctcttctc 274
             ||||||||||||||||||||||
Sbjct: 45970 ctccctccctctccctcttctc 45991



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>gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, complete sequence
          Length = 212018

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 255   ccctccctctccctcttctcaa 276
             ||||||||||||||||||||||
Sbjct: 51261 ccctccctctccctcttctcaa 51240



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>emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on chromosome X, complete
              sequence
          Length = 166357

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 253    ctccctccctctccctcttctc 274
              ||||||||||||||||||||||
Sbjct: 148324 ctccctccctctccctcttctc 148345



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>gb|AC151299.3| Mus musculus BAC clone RP23-11N17 from chromosome 17, complete sequence
          Length = 206555

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 253   ctccctccctctccctcttctc 274
             ||||||||||||||||||||||
Sbjct: 36626 ctccctccctctccctcttctc 36647



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>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence
          Length = 221564

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    ctccctccctctccctcttct 273
              |||||||||||||||||||||
Sbjct: 125688 ctccctccctctccctcttct 125668



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>gb|AC112866.5| Rattus norvegicus 1 BAC CH230-375M13 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 147079

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 253   ctccctccctctccctcttct 273
             |||||||||||||||||||||
Sbjct: 64265 ctccctccctctccctcttct 64285



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>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2,
             complete sequence
          Length = 140757

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   actccctccctctccctcttc 272
             |||||||||||||||||||||
Sbjct: 64533 actccctccctctccctcttc 64513



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>ref|XM_775212.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32019-PA,
            isoform A (LOC574816), mRNA
          Length = 13218

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 258  tccctctccctcttctcaacg 278
            |||||||||||||||||||||
Sbjct: 9779 tccctctccctcttctcaacg 9759



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>gb|AC087382.11| Homo sapiens chromosome 15, clone RP11-653J6, complete sequence
          Length = 227632

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    ctccctccctctccctcttct 273
              |||||||||||||||||||||
Sbjct: 139615 ctccctccctctccctcttct 139595



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>gb|AC132312.4| Mus musculus BAC clone RP24-298A20 from 12, complete sequence
          Length = 177464

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 253   ctccctccctctccctcttct 273
             |||||||||||||||||||||
Sbjct: 93525 ctccctccctctccctcttct 93505



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>emb|AL845164.5| Mouse DNA sequence from clone RP23-286G12 on chromosome 2, complete
             sequence
          Length = 115921

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 250   aaactccctccctctccctct 270
             |||||||||||||||||||||
Sbjct: 29646 aaactccctccctctccctct 29666



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>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence
          Length = 197719

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 138388 ctccctccctctccctcttc 138407



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>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 53380 ctccctccctctccctcttc 53361



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>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 158719 ctccctccctctccctcttc 158700



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>gb|AC166815.6| Mus musculus chromosome 18, clone RP23-373L14, complete sequence
          Length = 137949

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 55111 ctccctccctctccctcttc 55130



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>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence
          Length = 162232

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 107153 ctccctccctctccctcttc 107172



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>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 205067 ctccctccctctccctcttc 205086



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 205041 ctccctccctctccctcttc 205060



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 205015 ctccctccctctccctcttc 205034



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>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence
          Length = 194548

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 249    aaaactccctccctctccctcttc 272
              ||||||||||||||||||| ||||
Sbjct: 142487 aaaactccctccctctcccccttc 142510



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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 87567 ctccctccctctccctcttc 87548



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>gb|AC146390.4| Pan troglodytes BAC clone RP43-145D14 from 7, complete sequence
          Length = 116302

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   agaaaactccctccctctcc 266
             ||||||||||||||||||||
Sbjct: 44339 agaaaactccctccctctcc 44320



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>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence
          Length = 188380

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 138798 ctccctccctctccctcttc 138817



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>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence
          Length = 242229

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 233612 ctccctccctctccctcttc 233631



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 253      ctccctccctctccctcttc 272
                ||||||||||||||||||||
Sbjct: 32656340 ctccctccctctccctcttc 32656359



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>gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome 17, complete sequence
          Length = 220643

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 65965 ctccctccctctccctcttc 65946



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>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence
          Length = 193216

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 190105 ctccctccctctccctcttc 190124



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>gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosome 17, complete sequence
          Length = 211198

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 206726 ctccctccctctccctcttc 206707



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>gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome 9, complete sequence
          Length = 135119

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 78121 ctccctccctctccctcttc 78140



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>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence
          Length = 178844

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 38613 ctccctccctctccctcttc 38632



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>gb|AC163993.3| Mus musculus chromosome 19, clone RP24-78O14, complete sequence
          Length = 177411

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 249   aaaactccctccctctccctcttc 272
             ||||||||||||||||||| ||||
Sbjct: 61716 aaaactccctccctctcccccttc 61693



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>emb|CR339059.15| Zebrafish DNA sequence from clone CH211-121I18 in linkage group 3,
              complete sequence
          Length = 154299

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 113613 ctccctccctctccctcttc 113632



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>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9,
             complete sequence
          Length = 221511

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 62714 ctccctccctctccctcttc 62733



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>gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, complete sequence
          Length = 165651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tccctccctctccctcttct 273
              ||||||||||||||||||||
Sbjct: 115605 tccctccctctccctcttct 115586



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>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 62310 ctccctccctctccctcttc 62291



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>emb|AL161936.15| Human DNA sequence from clone RP11-48B24 on chromosome 10 Contains the 3'
              end of the WAC gene for WW domain-containing adapter with a
              coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753),
              a CGI-121 protein (CGI-121) pseudogene, the NMA gene for
              novel protein and two CpG islands, complete sequence
          Length = 155584

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 145987 ctccctccctctccctcttc 146006



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>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence
          Length = 202205

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 109340 ctccctccctctccctcttc 109321



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 109314 ctccctccctctccctcttc 109295



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 109288 ctccctccctctccctcttc 109269



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>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 242500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 114052 ctccctccctctccctcttc 114071



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>emb|BX548038.9| Zebrafish DNA sequence from clone DKEY-219C10 in linkage group 9,
            complete sequence
          Length = 173526

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 253  ctccctccctctccctcttc 272
            ||||||||||||||||||||
Sbjct: 5919 ctccctccctctccctcttc 5938



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>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21, complete
              sequence
          Length = 180154

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 115515 ctccctccctctccctcttc 115534



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>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 101990 ctccctccctctccctcttc 102009



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>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete
             sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 81920 ctccctccctctccctcttc 81939



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>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2, complete
              sequence
          Length = 249584

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 177104 ctccctccctctccctcttc 177085



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>emb|BX571668.20| Zebrafish DNA sequence from clone DKEY-47M8 in linkage group 10, complete
              sequence
          Length = 242710

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 104284 ctccctccctctccctcttc 104303



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>gb|AF351386.1| Gossypium hirsutum clone JESPR148 microsatellite sequence
          Length = 312

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 tgccaaattcggatgtcaaa 156
           ||||||||||||||||||||
Sbjct: 255 tgccaaattcggatgtcaaa 274



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>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete
            sequence
          Length = 139613

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  ctccctccctctccctcttc 272
            ||||||||||||||||||||
Sbjct: 5233 ctccctccctctccctcttc 5214



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>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 148698 ctccctccctctccctcttc 148717



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    aaactccctccctctccctc 269
              ||||||||||||||||||||
Sbjct: 637274 aaactccctccctctccctc 637293



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      ccctccctctccctcttctc 274
                ||||||||||||||||||||
Sbjct: 12285990 ccctccctctccctcttctc 12286009



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 253      ctccctccctctccctcttc 272
                ||||||||||||||||||||
Sbjct: 32746850 ctccctccctctccctcttc 32746869



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>gb|AC010132.5|AC010132 Homo sapiens BAC clone RP11-111K18 from 7p11.2-p2, complete sequence
          Length = 166680

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 78244 ctccctccctctccctcttc 78263



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>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence
          Length = 184036

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   agaaaactccctccctctcc 266
             ||||||||||||||||||||
Sbjct: 52134 agaaaactccctccctctcc 52115



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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 70464 ctccctccctctccctcttc 70483



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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ccctccctctccctcttctc 274
             ||||||||||||||||||||
Sbjct: 69544 ccctccctctccctcttctc 69563



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>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete
              sequence
          Length = 141997

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 120264 ctccctccctctccctcttc 120245



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>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete
             sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 58127 ctccctccctctccctcttc 58108



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>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence
          Length = 160247

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 67231 ctccctccctctccctcttc 67250



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>gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, complete sequence
          Length = 195195

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 145223 ctccctccctctccctcttc 145204



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>emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 in linkage group 18,
             complete sequence
          Length = 138838

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 81203 ctccctccctctccctcttc 81222



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>emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in linkage group 4,
             complete sequence
          Length = 206525

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 47344 ctccctccctctccctcttc 47363



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>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence
          Length = 172337

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 85724 ctccctccctctccctcttc 85705



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>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence
          Length = 136996

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 81134 ctccctccctctccctcttc 81115



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    aaactccctccctctccctc 269
              ||||||||||||||||||||
Sbjct: 637274 aaactccctccctctccctc 637293



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>gb|AC161148.7| Mus musculus BAC clone RP23-358L5 from chromosome 1, complete sequence
          Length = 181120

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 56548 ctccctccctctccctcttc 56567



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>emb|AL954349.10| Mouse DNA sequence from clone RP24-408O24 on chromosome 4, complete
             sequence
          Length = 20892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 12189 ctccctccctctccctcttc 12208



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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    aaactccctccctctccctc 269
              ||||||||||||||||||||
Sbjct: 105698 aaactccctccctctccctc 105679



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>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete
             sequence
          Length = 226188

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 35126 ctccctccctctccctcttc 35145



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>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete
              sequence
          Length = 162839

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     acaggttcctccccagcccc 55
              ||||||||||||||||||||
Sbjct: 154931 acaggttcctccccagcccc 154912



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>gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, complete sequence
          Length = 233830

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctccctccctctccctcttc 272
              ||||||||||||||||||||
Sbjct: 177613 ctccctccctctccctcttc 177632



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>emb|AL929110.10| Mouse DNA sequence from clone RP23-275P20 on chromosome 2, complete
             sequence
          Length = 186386

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 245   atagaaaactccctccctctccctcttc 272
             ||||| ||||||||||||||| ||||||
Sbjct: 46587 atagagaactccctccctctctctcttc 46614



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>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 85999 ctccctccctctccctcttc 85980



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>gb|AY285165.1| Sus scrofa clone UMNp1000.gcg microsatellite sequence
          Length = 730

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 actccctccctctccctctt 271
           ||||||||||||||||||||
Sbjct: 70  actccctccctctccctctt 89



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>emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chromosome 4, complete
             sequence
          Length = 193830

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   ccctccctctccctcttctc 274
             ||||||||||||||||||||
Sbjct: 92741 ccctccctctccctcttctc 92722



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>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete
              sequence
          Length = 242502

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    ccctccctctccctcttctc 274
              ||||||||||||||||||||
Sbjct: 186807 ccctccctctccctcttctc 186826



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>emb|AL807397.6| Mouse DNA sequence from clone RP23-176N13 on chromosome 4, complete
             sequence
          Length = 193939

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   ctccctccctctccctcttc 272
             ||||||||||||||||||||
Sbjct: 29721 ctccctccctctccctcttc 29740



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>dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds,
             isolate:CBRC7TM_164
          Length = 18512

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    acaggttcctccccagcccc 55
             ||||||||||||||||||||
Sbjct: 15728 acaggttcctccccagcccc 15709


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,760,981
Number of Sequences: 3902068
Number of extensions: 2760981
Number of successful extensions: 156648
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156071
Number of HSP's gapped (non-prelim): 577
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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